A study of the phylogeny of Brassica rapa B. nigra Raphanus sativus and their related genera using noncoding regions of chloroplast DNA

Molecular Phylogenetics and Evolution

Volumn 23, Issue 2, 2002, Pages 268-275

  Yang, Yau Wen ^a   Tai, Pon Yean ^a   Chen, Ying ^a   Li, Wen Hsiung ^b  

^a INSTITUTE OF PLANT AND MICROBIAL BIOLOGY   (Taiwan)

^b UNIVERSITY OF CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHLOROPLAST DNA; LEUCINE TRANSFER RNA; PHENYLALANINE TRANSFER RNA; PLANT DNA; SPACER DNA; THREONINE TRANSFER RNA;

ARTICLE; BRASSICACEAE; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; MOLECULAR GENETICS; PHYLOGENY; POINT MUTATION; TIME; TURNIP;

BRASSICA RAPA; BRASSICACEAE; DNA, CHLOROPLAST; DNA, INTERGENIC; DNA, PLANT; MOLECULAR SEQUENCE DATA; PHYLOGENY; POINT MUTATION; RNA, TRANSFER, LEU; RNA, TRANSFER, PHE; RNA, TRANSFER, THR; SEQUENCE ANALYSIS, DNA; TIME FACTORS; VARIATION (GENETICS);

BRASSICA; BRASSICA NIGRA; BRASSICA RAPA; BRASSICA RAPA SUBSP. RAPA; RAPHANUS SATIVUS;

EID: 0035983979     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1055-7903(02)00026-X     Document Type: Article

References (28)

1. A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants
2. Relative rates of nucleotide substitution at the rbcL locus of monocotyledonous plants
3. A simple and rapid method for the preparation of total plant DNA
4. A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences
5. An ancient group I intron shared by eubacteria and chloroplasts
6. The molecular clock runs more slowly in man than in apes and monkeys
7. Neighboring base composition and transversion/transition bias in a comparison of rice and maize chloroplast noncoding regions
8. Neighboring base composition is strongly correlated with base substitution bias in a region of the chloroplast genome
9. The influence of specific neighboring bases substitution bias in noncoding regions of the plant chloroplast genome
10. Plant mitochondrial DNA evolves rapidly in structure but slowly in sequence
11. Phylogeny of Brassica and allied genera based on variation in chloroplast and mitochondrial DNA patterns: Molecular and taxonomic classifications are incongruous
12. The neighbor-joining method: A new method for reconstructing phylogenetic trees
13. Complete structure of the chloroplast genome of Arabidopsis thaliana
14. Polyphyletism of Celastrales deduced from a chloroplast noncoding DNA region
15. Brassica taxonomy based on nuclear restriction fragment length polymorphisms (RFLPs) 1. Genome evolution of diploid and amphidiploid species
16. Brassica taxonomy based on nuclear restriction fragment length polymorphisms (RFLPs) 3. Genome relationships in Brassica and related genera and the origin of B. oleracea and B. rapa (syn. campestris)
17. Universal primers for amplification of three non-coding regions of chloroplast DNA
18. Comparison of RFLP and RAPD markers to estimating genetic relationships within and among cruciferous species
19. Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilization
20. Molecular systematics of Brassica and allied genera (Subtribe Brassicinae. Brassiceae) - Chloroplast genome and cytodeme congruence
21. Phylogenetic implications of chloroplast DNA restriction site variation in subtribes Raphaninae and Cakilinae (Brassicaceae tribe Brassiceae)
22. Rates of nucleotide substitution vary greatly among plant mitochondrial chloroplast and nuclear DNAs
23. Evidence for higher rates of nucleotide substitution in rodents than in man
24. Bacterial origin of a chloroplast intron: Conserved self-splicing introns in cyanobacteria
25. Phylogenetic position of Raphanus in relation to Brassica species based on 5S rRNA spacer sequence data
26. Molecular phylogenetic studies of Brassica Rorippa Arabidopsis and allied genera based on the internal transcribed spacer region of 18S-25S rDNA