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In the dynamical simulation, we fixed the silanols of the other surface (including the silicon atoms)
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Even in our large slab, the constraints imposed on the bottom layer of the slab prevent a full relaxation of the strain energy of the five-membered ring. In fact, in a separate simulation of the condensation reaction where both surfaces of the slab were free to move, we observed a large rearrengement of the botton surface and a decrease of the activation energy down to 173 kJ/mol.
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