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Journal of the American Chemical Society

Volumn 123, Issue 7, 2001, Pages 1267-1274

Stability and structure of RNA duplexes containing isoguanosine and isocytidine

(3) Chen, X a Kierzek, R b Turner, D H a

a UNIVERSITY OF ROCHESTER (United States)

b INSTITUTE OF BIOORGANIC CHEMISTRY (Poland)

Author keywords

[No Author keywords available]

Indexed keywords

CYTIDINE DERIVATIVE; GUANOSINE DERIVATIVE; ISOCYTIDINE; ISOGUANOSINE; NUCLEOTIDE; RNA; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; BASE PAIRING; CALCULATION; CHEMICAL STRUCTURE; CRYSTAL STRUCTURE; ENERGY; MOLECULAR STABILITY; NUCLEAR MAGNETIC RESONANCE; POLARIMETRY; STRUCTURE ANALYSIS; THERMODYNAMICS;

CYTIDINE; GUANOSINE; MAGNETIC RESONANCE SPECTROSCOPY; NUCLEIC ACID CONFORMATION; RNA; RNA STABILITY; SPECTROPHOTOMETRY, ULTRAVIOLET; THERMODYNAMICS;

EID: 0035925122 PISSN: 00027863 EISSN: None Source Type: Journal
DOI: 10.1021/ja002623i Document Type: Article

Times cited : (43)

References (83)

1
- 0004246255
- Benjamin Cummings Inc.; Menlo Park, CA
- (1987) Molecular Biology of the Gene
- Watson, J.D.¹ Hopkins, N.H.² Roberts, J.W.³ Steitz, J.A.⁴ Weiner, A.M.⁵

2
- 0003604405
- Cold Spring Harbor Press: Cold Spring Harbor, NY
- (1999) The RNA World, 2nd ed.
- Gesteland, R.F.¹ Cech, T.R.² Atkins, J.F.³

3
- 0029825658
- (1996) Science , vol.274 , pp. 1367-1371
- Fourmy, D.¹ Recht, M.I.² Blanchard, S.C.³ Puglisi, J.D.⁴

4
- 0025367254
- (1990) Annu. Rev. Biochem. , vol.59 , pp. 543-568
- Cech, T.R.¹

5
- 0004054951
- Antisense Research and Application; Springer, New York
- (1998) Handbook of Experimental Pharmacology , vol.131
- Crooke, S.T.¹

6
- 0033057478
- (1999) Proc. Natl. Acad. Sci. U.S.A. , vol.96 , pp. 2734-2739
- Testa, S.M.¹ Gryaznov, S.M.² Turner, D.H.³

7
- 0344641913
- (1999) Curr. Opin. Chem. Biol. , vol.3 , pp. 688-693
- Dervan, P.B.¹ Burli, R.W.²

8
- 0031787788
- (1998) Nucleosides Nucleotides , vol.17 , pp. 1861-1869
- Letsinger, R.L.¹

9
- 0001292756
- (1997) Acc. Chem. Res. , vol.30 , pp. 357-363
- Seeman, N.C.¹

10
- 0005984575
- Klumer
- (1997) The control of DNA structure: From topological modules to geometrical modules, Modular Chemistry , pp. 95-104
- Seeman, N.C.¹ Qi, J.² Li, X.³ Tang, X.⁴ Leontis, N.B.⁵ Liu, B.⁶ Zhang, Y.⁷ Du, S.M.⁸ Chen, J.⁹

12
- 0002635816
- Nucleic Acids: Structures, Properties, and Functions; Bloomfield, V. A., Crothers, D. M., Tinoco, I., Jr., Eds.; University Science Books; Sausalito, CA; Chapter 8
- (2000) , pp. 259-334
- Turner, D.H.¹

13
- 0023785594
- (1988) Annu. Rev. Biophys. Biophys. Chem. , vol.17 , pp. 167-192
- Turner, D.H.¹ Sugimoto, N.² Freier, S.M.³

14
- 0025283298
- (1990) J. Am. Chem. Soc. , vol.112 , pp. 2008-2010
- Jorgensen, W.L.¹ Pranata, J.²

15
- 0001543861
- (1994) J. Am. Chem. Soc. , vol.116 , pp. 4993-4994
- Newcomb, L.F.¹ Gellman, S.H.²

16
- 0029118487
- (1995) Biophys. J. , vol.69 , pp. 1528-1535
- Friedman, R.A.¹ Honig, B.²

17
- 0030345452
- (1996) Biophys. J. , vol.71 , pp. 3523-3525
- Gellman, S.H.¹ Haque, T.S.² Newcomb, L.F.³

18
- 0001017744
- (1996) Biophys. J. , vol.71 , pp. 3525-3526
- Friedman, R.A.¹ Honig, B.²

19
- 0031808069
- (1998) Biophys. J. , vol.75 , pp. 134-149
- Feig, M.¹ Pettitt, B.M.²

20
- 0034654495
- (2000) J. Am. Chem. Soc. , vol.122 , pp. 2213-2222
- Guckian, K.M.¹ Schweitzer, B.A.² Ren, R.X.F.³ Scheils, C.J.⁴ Tahmassebi, D.C.⁵ Kool, E.T.⁶

21
- 0000562454
- (2000) Angew. Chem. Intl. Ed. , vol.39 , pp. 991-1009
- Kool, E.T.¹ Morales, J.C.² Guckian, K.M.³

22
- 0025008851
- (1991) Nature , vol.343 , pp. 33-37
- Piccirilli, J.A.¹ Krauch, T.² Moroney, S.³ Benner, S.⁴

23
- 0031792598
- (1998) Nat. Struct. Bio. , vol.5 , pp. 950-954
- Morales, J.C.¹ Kool, E.T.²

24
- 0031790169
- (1998) Nat. Struct. Bio. , vol.5 , pp. 954-959
- Guckian, K.M.¹ Krugh, T.R.² Kool, E.T.³

25
- 0022429804
- (1985) Nucleic Acids Res. , vol.13 , pp. 8927-8938
- Martin, F.H.¹ Castro, M.M.² Aboul-ela, F.³ Tinoco I., Jr.⁴

26
- 0000789168
- (1987) J. Am. Chem. Soc. , vol.109 , pp. 3783-3785
- Turner, D.H.¹ Sugimoto, N.² Kierzek, R.³ Dreiker, S.D.⁴

27
- 0020489991
- (1982) Nucleic Acids Res. , vol.10 , pp. 4351-4361
- Gaffney, B.L.¹ Marky, L.A.² Jones, R.A.³

28
- 0005911106
- note

29
- 0011991429
- Horizons in Biochemistry; Kasha, M., Pullmann, B., Eds.; Academic Press: New York
- (1962) , pp. 103-126
- Rich, A.¹

30
- 0031004327
- (1997) J. Am. Chem. Soc. , vol.119 , pp. 4640-4649
- Roberts, C.¹ Bandaru, R.² Switzer, C.³

31
- 0019493446
- (1981) J. Nat. Prod. , vol.44 , pp. 206-214
- Jurczyk, S.C.¹ Kim, Y.H.² Nachman, R.J.³ Pavelka, L.⁴ Mosher, H.S.⁵

32
- 84982342134
- (1932) Helv. Chim. Acta , vol.15 , pp. 464-471
- Cherbuliez, E.¹ Bernhard, K.²

33
- 0019489320
- (1981) Science , vol.212 , pp. 557-558
- Fuhrman, F.A.¹ Fuhrman, G.J.² Nachman, R.J.³ Mosher, H.S.⁴

34
- 0017060701
- (1976) Lloydia , vol.39 , pp. 363
- Pettit, G.R.¹ Ode, R.H.² Coomes, M.R.³ Ode, S.L.⁴

35
- 0018882260
- (1980) Tetrahedron Lett. , vol.21 , pp. 567-568
- Quinn, R.J.¹ Gregson, R.P.² Cook, A.F.³ Bartlett, R.T.⁴

36
- 0019493446
- (1981) J. Nat. Prod. , vol.44 , pp. 206-214
- Kim, Y.H.¹ Nachman, R.J.² Pavelka, L.³ Mosher, H.S.⁴

37
- 33947449827
- (1950) J. Am. Chem. Soc. , vol.72 , pp. 2809-1810
- Bergmann, W.¹ Feeney, R.J.²

38
- 0027492904
- (1993) Biochemistry , vol.32 , pp. 10489-10496
- Switzer, C.Y.¹ Moroney, S.E.² Benner, S.A.³

39
- 0026523058
- (1992) Nature , vol.356 , pp. 537-539
- Bain, J.D.¹ Switzer, C.Y.² Chamberlin, A.R.³ Benner, S.A.⁴

40
- 0016189342
- (1974) J. Mol. Biol. , vol.86 , pp. 843-853
- Borer, P.N.¹ Dengler, B.² Tinoco I., Jr.³ Uhlenbeck, O.C.⁴

41
- 0015914592
- (1973) J. Mol. Biol. , vol.73 , pp. 497-511
- Gralla, J.¹ Crothers, D.M.²

42
- 0031541394
- (1997) Biopolymers , vol.42 , pp. 783-793
- Gray, D.M.¹

43
- 0032552882
- (1998) Biochemistry , vol.37 , pp. 14719-14735
- Xia, T.¹ SantaLucia J., Jr.² Burkard, M.E.³ Kierzek, R.⁴ Schroeder, S.J.⁵ Jiao, X.⁶ Cox, C.⁷ Turner, D.H.⁸

44
- 0027006853
- (1992) Biopolymers , vol.32 , pp. 1679-1693
- Goldstein, R.¹ Benight, A.²

45
- 0004161838
- Cambridge University Press: New York
- (1992) Numerical Recipes in C, 2nd ed.
- Press, W.H.¹ Teukolsky, S.A.² Vetterling, W.T.³ Flannery, B.P.⁴

46
- 0020674698
- (1983) Biochemistry , vol.22 , pp. 256-263
- Petersheim, M.¹ Turner, D.H.²

47
- 0026348081
- (1991) Q. Rev. Biophys. , vol.24 , pp. 479-532
- Varani, G.¹ Tinoco I., Jr.²

48
- 0034254780
- (2000) Biochemistry , vol.39 , pp. 8970-8982
- Chen, X.¹ McDowell, J.A.² Kierzek, R.³ Krugh, T.R.⁴ Turner, D.H.⁵

49
- 0000389264
- (1995) J. Biomol. NMR , vol.5 , pp. 327-331
- Lippens, G.¹ Dhalluin, C.² Wieruszeski, J.M.³

50
- 0031660471
- (1998) Biophys. J. , vol.75 , pp. 1163-1171
- Yang, X.L.¹ Sugimoto, H.² Ikeda, S.³ Saito, I.⁴ Wang, A.H.J.⁵

51
- 0028787028
- (1995) Helv. Chim. Acta , vol.78 , pp. 1843-1854
- Seela, F.¹ Wei, C.² Kazimierczuk, Z.³

52
- 0000826192
- (1994) Chem. Rev. , vol.94 , pp. 1315-1338
- Gorenstein, D.G.¹

53
- 0032959711
- (1999) Biophys. J. , vol.76 , Issue.PART 1 , pp. 65-75
- Rife, J.P.¹ Stallings, S.C.² Correll, C.C.³ Dallas, A.⁴ Steitz, T.A.⁵ Moore, P.B.⁶

54
- 0021770550
- (1984) Nucleic Acids Res. , vol.12 , pp. 4323-4338
- Westerink, H.P.¹ Van der Marel, G.A.² Van Boom, J.H.³ Haasnoot, C.A.G.⁴

55
- 0021702101
- (1984) J. Biomol. Struct. Dyn. , vol.2 , pp. 345-360
- Haasnoot, C.A.G.¹ Westerink, H.P.² Van der Marel, G.A.³ Van Boom, J.H.⁴

56
- 0024599312
- (1989) Nucleic Acids Res. , vol.17 , pp. 1797-1803
- Dickerson, R.E.¹

57
- 0003458038
- Springer-Verlag: New York
- (1984) Principles of Nucleic Acid Structure
- Saenger, W.¹

58
- 0029082529
- (1995) J. Mol. Biol. , vol.250 , pp. 333-353
- Allain, F.H.-T.¹ Varani, G.²

59
- 0030779674
- (1997) Nucleic Acids Res. , vol.25 , pp. 4589-4598
- Popenda, M.¹ Biala, E.² Milecki, J.³ Adamiak, R.W.⁴

60
- 0030726858
- (1997) Nucleic Acids Res. , vol.25 , pp. 4599-4607
- Adamiak, D.A.¹ Milecki, J.² Popenda, M.³ Adamiak, R.W.⁴ Dauter, Z.⁵ Rypniewski, W.R.⁶

61
- 0005912123
- Oxford University Press: Oxford
- (1997) Genes V.I.
- Lewin, B.¹

62
- 0005911474
- (1982) Nature , vol.299 , pp. 11349-11354
- Walter, P.¹ Blobel, G.²

63
- 0026639881
- (1992) Science , vol.256 , pp. 1416-1419
- Noller, H.F.¹ Hoffarth, V.² Zimniak, L.³

64
- 0029744135
- (1996) Biochemistry , vol.35 , pp. 9677-9689
- Wu, M.¹ Turner, D.H.²

65
- 0029805937
- (1996) Biochemistry , vol.35 , pp. 14077-14089
- McDowell, J.A.¹ Turner, D.H.²

66
- 0030739211
- (1997) Biochemistry , vol.36 , pp. 8030-8038
- McDowell, J.A.¹ He, L.² Chen, X.³ Turner, D.H.⁴

67
- 0003769049
- Yale University Press: New Haven, CT
- (1992) X-PLOR Version 3.1. System for X-ray Crystallography and NMR
- Brunger, A.¹

68
- 0029011701
- (1995) J. Am. Chem. Soc. , vol.117 , pp. 5179-5197
- Cornell, W.D.¹ Cieplak, P.² Bayly, C.I.³ Gould, I.R.⁴ Merz K.M., Jr.⁵ Ferguson, D.M.⁶ Spellmeyer, D.C.⁷ Fox, T.⁸ Caldwell, J.W.⁹ Kollman, P.A.¹⁰

69
- 0000926037
- (1992) J. Am. Chem. Soc. , vol.114 , pp. 3675-3683
- Leach, A.R.¹ Kollman, P.A.²

70
- 0031001221
- (1997) Mutation Res. , vol.384 , pp. 15-22
- Cox, M.M.¹

71
- 0000616205
- (1984) Bull. Math. Biol. , vol.46 , pp. 591-621
- Zuker, M.¹ Sankoff, D.²

72
- 0029258393
- (1995) RNA , vol.1 , pp. 95-101
- Stage, T.K.¹ Hertel, K.J.² Uhlenbeck, O.K.³

73
- 0034622514
- (2000) Biochemistry , vol.39 , pp. 9257-9274
- Schroeder, S.J.¹ Turner, D.H.²

74
- 0028003846
- (1994) Biochemistry , vol.33 , pp. 13824-13835
- Strobel, S.A.¹ Cech, T.R.² Usman, N.³ Beigelman, L.⁴

75
- 0000017231
- (1965) Collect. Czech. Chem. Commun. , vol.30 , pp. 1880-1889
- Zemlicka, J.¹ Sorm, F.²

76
- 0029151591
- (1995) Nucleic Acids Res. , vol.23 , pp. 2677-2684
- Wincott, F.¹ DiRenzo, A.² Shaffer, C.³ Grimm, S.⁴ Tracz, D.⁵ Workman, C.⁶ Sweedler, D.⁷ Gonzalez, C.⁸ Scaringe, S.⁹ Usman, N.¹⁰

77
- 4244120872
- (1956) Anal. Chem. , vol.28 , pp. 1756-1758
- Chen, P.S.¹ Toribara T.Y., Jr.² Warner, H.³

78
- 0001473762
- rd ed.; Fasman, G. D., Ed.; CRC Press: Cleveland, OH
- (1975) , vol.1 , pp. 597
- Borer, P.N.¹

79
- 0005946128
- rd ed.; Fasman, G. D., Ed.; CRC Press: Cleveland, OH
- (1975) , vol.1 , pp. 579
- Richards, E.G.¹

80
- 48749149745
- (1983) J. Magn. Resort , vol.55 , pp. 283-300
- Hore, P.J.¹

81
- 0005951078
- (1996) J. Mol. Biol. , vol.264 , pp. 98-980
- Jucker, F.M.¹ Heus, H.A.² Yip, P.F.³ Moors, E.H.M.⁴ Pardi, A.⁵

82
- 0031574326
- (1997) Structure , vol.5 , pp. 1639-1653
- Dallas, A.¹ Moore, P.B.²

83
- 0005945514
- note

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.