The shuffling function of resolvases

Gene

Volumn 269, Issue 1-2, 2001, Pages 121-130

  Kholodii, Gennady ^a  

^a INSTITUTE OF MOLECULAR GENETICS   (Russian Federation)

Author keywords

cinH gene; Hybrid res site; par locus; pKLH2; Replicon fusion; Tn1721;

Indexed keywords

RESOLVASE;

ARTICLE; BACTERIUM; CONTROLLED STUDY; ENHANCER REGION; GENE FUSION; GENE LOCUS; GENE STRUCTURE; GENETIC CODE; GENETIC RECOMBINATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REGULATORY MECHANISM; REPLICON; SEQUENCE HOMOLOGY; TRANSPOSON;

EID: 0035897682     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(01)00451-6     Document Type: Article

References (30)

1. A.L Bednarz M.R Boocock D.J Sherratt Determinants of correct res site alignment in site-specific recombination by Tn 3 resolvase Genes Dev. 4 1990 2366 2375
2. H.W Benjamin N.R Cozzarelli Geometric arrangements of Tn 3 resolvase sites J. Biol. Chem. 265 1990 6441 6447
3. J.B Bliska H.W Benjamin N.R Cozzarelli Mechanism of Tn 3 resolvase recombination in vivo J. Biol. Chem. 266 1991 2041 2047
4. P Dröge N.R Cozzarelli Recombination of knotted substrates by Tn 3 resolvase Proc. Natl. Acad. Sci. USA 86 1989 6062 6066
5. L Eberl C.S Kristensen M Givskov E Grohmann M Gerlitz H Schwab Analysis of the multimer resolution system encoded by the parCBA operon of broad-host-range plasmid RP4 Mol. Microbiol. 12 1994 131 141
6. N Galtier M Gouy C Gautier SEAVIEW and PYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny CABIOS 12 1996 543 548
7. N.D.F Grindley M.R Lauth R.G Wells R.J Wityk J.J Salvo R.R Reed Transposon-mediated site-specific recombination: identification of three binding sites for resolvase at the res sites of γδ and Tn 3 Cell 30 1982 19 27
8. J Grinsted N.L Brown A Tn 21 terminal sequence within Tn 501 : complementation of tnpA gene function and transposon evolution Mol. Gen. Genet. 197 1984 497 502
9. S.C Hall S.E Halford Specificity of DNA recognition in the nucleoprotein complex for site-specific recombination by Tn 21 resolvase Nucleic Acids Res. 21 1993 5712 5719
10. R Kahmann F Rudt C Koch G Mertens G inversion in bacteriophage Mu DNA is stimulated by a site within the invertase gene and a host factor Cell 41 1985 771 780
11. G.Ya Kholodii Zh.M Gorlenko O.L Lomovskaya S.Z Mindlin O.V Yurieva V.G Nikiforov Molecular characterization of an aberrant mercury resistance transposable element from an environmental Acinetibacter strain Plasmid 30 1993 303 308
12. G Kholodii S Mindlin I Bass O Yurieva S Minakhina V Nikiforov Four genes, two ends, and a res region are involved in transposition of Tn 5053 : a paradigm for a novel family of transposons carrying either a mer operon or an integron Mol. Microbiol. 17 1995 1189 1200
13. G Kholodii O Yurieva S Mindlin Zh Gorlenko V Rybochkin V Nikiforov Tn 5044 , a novel Tn 3 family transposon coding for temperature sensitive mercury resistance Res. Microbiol. 151 2000 291 302
14. C.C Liu R Huhne J Tu E Lorbach P Dröge The resolvase encoded by Xanthomonas campestris transposable element IS Xc5 constitutes a new subfamily closely related to DNA invertases Genes Cells 3 1998 221 233
15. S Minakhina G Kholodii S Mindlin O Yurieva V Nikiforov Tn 5053 family transposons are res site hunters sensing plasmidal res sites occupied by cognate resolvases Mol. Microbiol. 33 1999 1059 1068
16. W Pansegrau E Lanka P.T Barth D.H Figurski D.G Guiney D Hass D.R Helinski H Schwab V.A Stanisich C.M Thomas Complete nucleotide sequence of Birmingham IncPα plasmids. Compilation and comparative analysis J. Mol. Biol. 239 1994 623 663
17. G.D Recchia R.M Hall Gene cassetts: a new class of mobile element Microbiology 141 1995 3015 3027
18. P Rogowsky R Schmitt Tn 1721 -encoded resolvase: structure of the tnpR gene and its in vitro functions Mol. Gen. Genet. 200 1985 176 181
19. P Rogowsky S.E Halford R Schmitt Definition of three resolvase binding sites at the res loci of Tn 21 and Tn 1721 EMBO J. 4 1985 2135 2141
20. S.J Rowland K.G Dyke Tn 552 , a novel transposable element from Staphylococcus aureus Mol. Microbiol. 4 1990 961 975
21. P Sadowski Site-specific recombinases: changing partners and doing the twist J. Bacteriol. 165 1986 341 347
22. J Sambrook E.F Fritsch T Maniatis Molecular Cloning: A Laboratory Manual 2nd Edition 1989 Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY
23. D Sherratt Tn 3 and related transposable elements: site-specific recombination and transposition D.E Berg M.M Howe Mobile DNA 1989 American Society for Microbiology Washington, DC 163 184
24. P Soultanas M Oram S.E Halford Site-specific recombination at res sites containing DNA-binding sequences for both Tn 21 resolvase and Tn 3 resolvase J. Mol. Biol. 245 1995 208 218
25. W.M Stark D.J Sherratt M.R Boocock Site-specific recombination by Tn3 resolvase: topological changes in the forward and reverse reactions Cell 58 1989 779 790
26. W.M Stark M.R Boocock D.J Sherratt Catalysis by site-specific recombinases Trends Genet. 8 1992 432 439
27. W.M Stark C.N Parker S.E Halford M.R Boocock Stereoselectivity of DNA catenane fusion by resolvase Nature 368 1994 76 78
28. H.M Thorpe C.M Smith In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family Proc. Natl. Acad. Sci. USA 95 1998 5505 5510
29. R.G Wells N.D Grindley Analysis of the gamma delta res site. Sites required for site-specific recombination and gene expression J. Mol. Biol. 179 1984 667 687
30. O.V Yurieva G.Ya Kholodii L.S Minakhin Zh.M Gorlenko E.S Kalyaeva S.Z Mindlin V.G Nikiforov Intercontinental spread of promiscuous mercury resistance operons in environmental bacteria Mol. Microbiol. 24 1997 321 329