Crosslinking of the complementary strands of DNA by UV light: Dependence on the oligonucleotide composition of the UV irradiated DNA

Biochimica et Biophysica Acta - Gene Structure and Expression

Volumn 1517, Issue 3, 2001, Pages 365-375

  Nejedlý, Karel ^a   Kittner, Radim ^a   Pospíšilová, Šárka ^a   Kypr, Jaroslav ^a  

^a INSTITUTE OF BIOPHYSICS   (Czech Republic)

Author keywords

DNA; Genome; Interstrand crosslink; Oligonucleotide composition; UV light

Indexed keywords

COMPLEMENTARY DNA; DINUCLEOTIDE; DNA FRAGMENT; DOUBLE STRANDED DNA; OLIGONUCLEOTIDE; PLASMID DNA; TRINUCLEOTIDE; VIRUS DNA;

ARTICLE; CONTROLLED STUDY; DENSITY; DNA CONFORMATION; DNA CONTENT; DNA CROSS LINKING; DNA HELIX; DNA RESTRICTION; DNA STRAND; GENOME; IRRADIATION; NONHUMAN; PRIORITY JOURNAL; RADIATION DOSE; RADIATION RESPONSE; THERMOSTABILITY; ULTRAVIOLET C RADIATION;

BASE SEQUENCE; BINDING SITES; CROSS-LINKING REAGENTS; DNA; DNA, VIRAL; HUMANS; OLIGODEOXYRIBONUCLEOTIDES; PHOTOCHEMISTRY; ULTRAVIOLET RAYS;

EID: 0035895831     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-4781(00)00299-2     Document Type: Article

References (30)

1. Sunlight ultraviolet and bacterial DNA base ratios
2. The photochemistry of nucleic acids
3. Evolutionary consequences of nonrandom damage and repair of chromatin domains
4. Solar ultraviolet and the evolutionary history of cyanobacteria
5. Alternative repair pathways for UV-induced DNA damage
6. Binding of transcription factors creates hot spots for UV photoproducts in vivo
7. UV damage to DNA strongly influences its rotational setting on the histone surface of reconstituted nucleosomes
8. Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA
9. Unequal photosensitivity of the two strands of DNA in bacteriophage λ
10. Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation
11. Cyclobutane-type pyrimidine dimers in polynucleotides
12. Thymine dimer formation in DNA between 25°C and 100°C
13. A specific photoreaction in polydeoxyadenylic acid
14. Origin of ultraviolet damage in DNA
15. Ultraviolet light induced linking of deoxyribonucleic acid strands and its reversal by photoreactivating enzyme
16. The cross-linking of DNA by ultraviolet radiation
17. n is facilitated by a structural transition
18. Ultraviolet-induced dimerization of non-adjacent pyrimidines
19. UV light-induced crosslinking of the strands of poly(dA-dT) and related alternating purine-pyrimidine DNAs
20. Theoretical analysis of DNA intrastrand cross linking by formation of 8,5′-cyclodeoxyadenosine
21. UV light-induced crosslinking of short DNA duplex strands: Nucleotide sequence preferences and a prominent role of the duplex ends
22. UV light-induced crosslinking of the complementary strands of plasmid pUC19 DNA restriction fragments
23. UV light-induced duplex-to-duplex crosslinking of DNA molecules in aqueous ethanol solutions
24. Invariant and variable base stacking geometries in B-DNA and A-DNA
25. Sterochemical features of thymidylyl-photodimerization in the Watson-Crick DNA helix
26. DNA sequence specificity of 4,5′,8-trimethylpsoralen cross-linking
27. Bending and torsional flexibility of G/C-rich sequences as determined by cyclization assays
28. Preferential transposition of an IS630-associated composite transposon to TA in the 5′-CTAG-3′ sequence
29. Structural comparison between the d(CTAG) sequence in oligonucleotides and trp and met repressor-operator complexes
30. HPLC photofingerprinting of conformational peculiarities and transitions in oligonucleotide duplexes