-
1
-
-
0032745320
-
Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea
-
Cann, I. K., Ishino, S., Hayashi, I., Komori, K., Toh, H., Morikawa, K., and Ishino, Y. (1999) Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea, J. Bacteriol. 181, 6591-6599.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 6591-6599
-
-
Cann, I.K.1
Ishino, S.2
Hayashi, I.3
Komori, K.4
Toh, H.5
Morikawa, K.6
Ishino, Y.7
-
2
-
-
0035093865
-
Biochemical analysis of replication factor C from the hyperthermophilic archaeon Pyrococcus furiosus
-
Cann, I. K., Ishino, S., Yuasa, M., Daiyasu, H., Toh, H., and Ishino, Y. (2001) Biochemical analysis of replication factor C from the hyperthermophilic archaeon Pyrococcus furiosus, J. Bacteriol. 183, 2614-2623.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2614-2623
-
-
Cann, I.K.1
Ishino, S.2
Yuasa, M.3
Daiyasu, H.4
Toh, H.5
Ishino, Y.6
-
3
-
-
0034652354
-
A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase
-
Chong, J. P., Hayashi, M. K., Simon, M. N., Xu, R. M., and Stillman, B. (2000) A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase, Proc. Natl. Acad. Sci. USA 97, 1530-1535.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 1530-1535
-
-
Chong, J.P.1
Hayashi, M.K.2
Simon, M.N.3
Xu, R.M.4
Stillman, B.5
-
4
-
-
0016426743
-
Extremely thermophilic acidophilic bacteria convergent with Sulfolobus acidocaldarius
-
De Rosa, M., Gambacorta, A., and Bu'Lock, J. D. (1975) Extremely thermophilic acidophilic bacteria convergent with Sulfolobus acidocaldarius, J. Gen. Microbiol. 86, 156-164.
-
(1975)
J. Gen. Microbiol.
, vol.86
, pp. 156-164
-
-
De Rosa, M.1
Gambacorta, A.2
Bu'Lock, J.D.3
-
5
-
-
0029975088
-
SPIDER and WEB: Processing and visualization of images in 3D electron microscopy and related fields
-
Frank, J., Radermacher, M., Penczek, P., Zhu, J., Li, Y., Ladjadj, M., and Leith, A. (1996) SPIDER and WEB: Processing and visualization of images in 3D electron microscopy and related fields, J. Struct. Biol. 116, 190-199.
-
(1996)
J. Struct. Biol.
, vol.116
, pp. 190-199
-
-
Frank, J.1
Radermacher, M.2
Penczek, P.3
Zhu, J.4
Li, Y.5
Ladjadj, M.6
Leith, A.7
-
6
-
-
0035252083
-
1-ATPase
-
1-ATPase, Nature 409, 637-641.
-
(2001)
Nature
, vol.409
, pp. 637-641
-
-
Gomis-Rüth, F.X.1
Moncalián, G.2
Pérez-Luque, R.3
González, A.4
Cabezón, E.5
De la Cruz, F.6
Coll, M.7
-
7
-
-
0030666224
-
Crystal structure of the δ′ subunit of the clamp-loader complex of E. coli DNA polymerase III
-
Guenther, B., Onrust, R., Sali, A., O'Donnell, M., and Kuriyan, J. (1997) Crystal structure of the d9 subunit of the clamp-loader complex of E. coli DNA polymerase III, Cell 91, 335-345.
-
(1997)
Cell
, vol.91
, pp. 335-345
-
-
Guenther, B.1
Onrust, R.2
Sali, A.3
O'Donnell, M.4
Kuriyan, J.5
-
9
-
-
0034114498
-
+ class helicase and motor protein for holliday junction branch migration
-
+ class helicase and motor protein for holliday junction branch migration, Mol. Microbiol. 36, 528-538.
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 528-538
-
-
Iwasaki, H.1
Han, Y.-W.2
Okamoto, T.3
Ohnishi, T.4
Yoshikawa, M.5
Yamada, K.6
Toh, H.7
Daiyasu, H.8
Ogura, T.9
Shinagawa, H.10
-
10
-
-
0024385309
-
Structural and enzymatic studies of the T4 DNA replication system. I. Physical characterization of the polymerase accessory protein complex
-
Jarvis, T. C., Paul, L. S., and von Hippel, P. H. (1989) Structural and enzymatic studies of the T4 DNA replication system. I. Physical characterization of the polymerase accessory protein complex, J. Biol. Chem. 264, 12709-12716.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 12709-12716
-
-
Jarvis, T.C.1
Paul, L.S.2
Von Hippel, P.H.3
-
11
-
-
0021070752
-
Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent
-
Jones, W. J., Leigh, J. A., Mayer, F., Woese, C. R., and Wolfe, R. S. (1983) Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent, Arch. Microbiol. 136, 254-261.
-
(1983)
Arch. Microbiol.
, vol.136
, pp. 254-261
-
-
Jones, W.J.1
Leigh, J.A.2
Mayer, F.3
Woese, C.R.4
Wolfe, R.S.5
-
12
-
-
0034629109
-
A unique organization of the protein subunits of the DNA polymerase clamp loader in the archaeon Methanobacterium thermoautotrophicum ΔH
-
Kelman, Z., and Hurwitz, J. (2000) A unique organization of the protein subunits of the DNA polymerase clamp loader in the archaeon Methanobacterium thermoautotrophicum ΔH, J. Biol. Chem. 275, 7327-7336.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 7327-7336
-
-
Kelman, Z.1
Hurwitz, J.2
-
13
-
-
0033956483
-
Functional interdependence of DNA polymerizing and 3′ → 5′ exonucleolytic activities in Pyrococcus furiosus DNA polymerase I
-
Komori, K., and Ishino, Y. (2000) Functional interdependence of DNA polymerizing and 3′ → 5′ exonucleolytic activities in Pyrococcus furiosus DNA polymerase I, Protein Eng. 13, 41-47.
-
(2000)
Protein Eng.
, vol.13
, pp. 41-47
-
-
Komori, K.1
Ishino, Y.2
-
14
-
-
0026717535
-
Three-dimensional structure of the β subunit of E. coli DNA polymerase III holoenzyme: A sliding DNA clamp
-
Kong, X.-P., Onrust, R., O'Donnell, M., and Kuriyan, J. (1992) Three-dimensional structure of the β subunit of E. coli DNA polymerase III holoenzyme: A sliding DNA clamp, Cell 69, 425-437.
-
(1992)
Cell
, vol.69
, pp. 425-437
-
-
Kong, X.-P.1
Onrust, R.2
O'Donnell, M.3
Kuriyan, J.4
-
15
-
-
0028618183
-
Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA
-
Krishna, T. S. R., Kong, X.-P., Gary, S., Burgers, P. M., and Kuriyan, J. (1994) Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA, Cell 79, 1233-1243.
-
(1994)
Cell
, vol.79
, pp. 1233-1243
-
-
Krishna, T.S.R.1
Kong, X.-P.2
Gary, S.3
Burgers, P.M.4
Kuriyan, J.5
-
16
-
-
0027772958
-
Sliding clamps of DNA polymerases
-
Kuriyan, J., and O'Donnell, M. (1993) Sliding clamps of DNA polymerases, J. Mol. Biol. 234, 915-925.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 915-925
-
-
Kuriyan, J.1
O'Donnell, M.2
-
17
-
-
0032555745
-
Crystal structure of the hexamerization domain of N-ethylmaleimide-sensitive fusion protein
-
Lenzen, C. U., Steinmann, D., Whiteheart, S. W., and Weis, W. I. (1998) Crystal structure of the hexamerization domain of N-ethylmaleimide-sensitive fusion protein, Cell 94, 525-536.
-
(1998)
Cell
, vol.94
, pp. 525-536
-
-
Lenzen, C.U.1
Steinmann, D.2
Whiteheart, S.W.3
Weis, W.I.4
-
18
-
-
0035107856
-
Crystal structure of an archaeal DNA sliding clamp: Proliferating cell nuclear antigen from Pyrococcus furiosus
-
Matsumiya, S., Ishino, Y., and Morikawa, K. (2001) Crystal structure of an archaeal DNA sliding clamp: Proliferating cell nuclear antigen from Pyrococcus furiosus, Protein Sci. 10, 17-23.
-
(2001)
Protein Sci.
, vol.10
, pp. 17-23
-
-
Matsumiya, S.1
Ishino, Y.2
Morikawa, K.3
-
19
-
-
0033792010
-
Two different oligomeric states of the RuvB branch migration motor protein as revealed by electron microscopy
-
Miyata, T., Yamada, K., Iwasaki, H., Shinagawa, H., Morikawa, K., and Mayanagi, K. (2000) Two different oligomeric states of the RuvB branch migration motor protein as revealed by electron microscopy, J. Struct. Biol. 131, 83-89.
-
(2000)
J. Struct. Biol.
, vol.131
, pp. 83-89
-
-
Miyata, T.1
Yamada, K.2
Iwasaki, H.3
Shinagawa, H.4
Morikawa, K.5
Mayanagi, K.6
-
20
-
-
0034628915
-
Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage
-
Moarefi, I., Jeruzalmi, D., Turner, J., O'Donnell, M., and Kuriyan, J. (2000) Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage, J. Mol. Biol. 296, 1215-1223.
-
(2000)
J. Mol. Biol.
, vol.296
, pp. 1215-1223
-
-
Moarefi, I.1
Jeruzalmi, D.2
Turner, J.3
O'Donnell, M.4
Kuriyan, J.5
-
21
-
-
0032102260
-
Clamping down on clamps and clamp loaders. The eukaryotic replication factor C
-
Mossi, R., and Hübscher, U. (1998) Clamping down on clamps and clamp loaders. The eukaryotic replication factor C, Eur. J. Biochem. 254, 209-216.
-
(1998)
Eur. J. Biochem.
, vol.254
, pp. 209-216
-
-
Mossi, R.1
Hübscher, U.2
-
22
-
-
0032969563
-
+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
-
+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes, Genome Res. 9, 27-43.
-
(1999)
Genome Res.
, vol.9
, pp. 27-43
-
-
Neuwald, A.F.1
Aravind, L.2
Spouge, J.L.3
Koonin, E.V.4
-
23
-
-
0026521233
-
Three-dimensional reconstruction of single particles embedded in ice
-
Penczek, P., Radermacher, M., and Frank, J. (1992) Three-dimensional reconstruction of single particles embedded in ice, Ultramicroscopy 40, 33-53.
-
(1992)
Ultramicroscopy
, vol.40
, pp. 33-53
-
-
Penczek, P.1
Radermacher, M.2
Frank, J.3
-
24
-
-
0034604383
-
Biochemical characterization of a clamp-loader complex homologous to eukaryotic replication factor C from the hyperthermophilic archaeon Sulfolobus solfataricus
-
Pisani, F. M., De Felice, M., Carpentieri, F., and Rossi, M. (2000) Biochemical characterization of a clamp-loader complex homologous to eukaryotic replication factor C from the hyperthermophilic archaeon Sulfolobus solfataricus, J. Mol. Biol. 301, 61-73.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 61-73
-
-
Pisani, F.M.1
De Felice, M.2
Carpentieri, F.3
Rossi, M.4
-
25
-
-
0001339881
-
Three-dimensional reconstruction of single particles from random and non-random tilt series
-
Radermacher, M. (1988) Three-dimensional reconstruction of single particles from random and non-random tilt series, J. Electron Microsc. Tech. 9, 359-394.
-
(1988)
J. Electron Microsc. Tech.
, vol.9
, pp. 359-394
-
-
Radermacher, M.1
-
26
-
-
0030614496
-
The ATP-dependent HslVU protease from Escherichia coli is a four-ring structure resembling the proteasome
-
Rohrwild, M., Pfeifer, G., Santarius, U., Muller, S. A., Huang, H. C., Engel, A., Baumeister, W., and Goldberg, A. L. (1997) The ATP-dependent HslVU protease from Escherichia coli is a four-ring structure resembling the proteasome, Nat. Struct. Biol. 4, 133-139.
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 133-139
-
-
Rohrwild, M.1
Pfeifer, G.2
Santarius, U.3
Muller, S.A.4
Huang, H.C.5
Engel, A.6
Baumeister, W.7
Goldberg, A.L.8
-
27
-
-
0032716810
-
Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7
-
Sawaya, M. R., Guo, S., Tabor, S., Richardson, C. C., and Ellenberger, T. (1999) Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7, Cell 99, 167-77.
-
(1999)
Cell
, vol.99
, pp. 167-177
-
-
Sawaya, M.R.1
Guo, S.2
Tabor, S.3
Richardson, C.C.4
Ellenberger, T.5
-
28
-
-
0032692565
-
Building a replisome from interacting pieces: Sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex
-
Shamoo, Y., and Steitz, T. A. (1999) Building a replisome from interacting pieces: Sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex, Cell 99, 155-166.
-
(1999)
Cell
, vol.99
, pp. 155-166
-
-
Shamoo, Y.1
Steitz, T.A.2
-
29
-
-
0034687738
-
ATP-dependent structural change of the eukaryotic clamp-loader protein, replication factor C
-
Shiomi, Y., Usukura, J., Masamura, Y., Takeyasu, K., Nakayama, Y., Obuse, C., Yoshikawa, H., and Tsurimoto, T. (2000) ATP-dependent structural change of the eukaryotic clamp-loader protein, replication factor C, Proc. Natl. Acad. Sci. USA 97, 14127-14132.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 14127-14132
-
-
Shiomi, Y.1
Usukura, J.2
Masamura, Y.3
Takeyasu, K.4
Nakayama, Y.5
Obuse, C.6
Yoshikawa, H.7
Tsurimoto, T.8
-
30
-
-
0034625236
-
Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides
-
Singleton, M. R., Sawaya, M. R., Ellenberger, T., and Wigley, D. B. (2000) Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides, Cell 101, 589-600.
-
(2000)
Cell
, vol.101
, pp. 589-600
-
-
Singleton, M.R.1
Sawaya, M.R.2
Ellenberger, T.3
Wigley, D.B.4
-
31
-
-
0030986962
-
Deletion analysis of the large subunit p140 in human replication factor C reveals regions required for complex formation and replication activities
-
Uhlmann, F., Cai, J., Gibbs, E., O'Donnell, M., and Hurwitz, J. (1997a) Deletion analysis of the large subunit p140 in human replication factor C reveals regions required for complex formation and replication activities, J. Biol. Chem. 272, 10058-10064.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 10058-10064
-
-
Uhlmann, F.1
Cai, J.2
Gibbs, E.3
O'Donnell, M.4
Hurwitz, J.5
-
32
-
-
0030892079
-
Identification of regions within the four small subunits of human replication factor C required for complex formation and DNA replication
-
Uhlmann, F., Gibbs, E., Cai, J., O'Donnell, M., and Hurwitz, J. (1997b) Identification of regions within the four small subunits of human replication factor C required for complex formation and DNA replication, J. Biol. Chem. 272, 10065-10071.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 10065-10071
-
-
Uhlmann, F.1
Gibbs, E.2
Cai, J.3
O'Donnell, M.4
Hurwitz, J.5
-
33
-
-
0001607723
-
Distantly related sequences in the α and β-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold
-
Walker, J. E., Saraste, M., Runswick, M. J., and Gay, N. J. (1982) Distantly related sequences in the α and β-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold, EMBO J. 1, 945-951.
-
(1982)
EMBO J.
, vol.1
, pp. 945-951
-
-
Walker, J.E.1
Saraste, M.2
Runswick, M.J.3
Gay, N.J.4
-
34
-
-
0001271789
-
Phylogenetic structure of the prokaryotic domain: The primary kingdoms
-
Woese, C. R., and Fox, G. E. (1977) Phylogenetic structure of the prokaryotic domain: The primary kingdoms, Proc. Natl. Acad. Sci. USA 74, 5088-5090.
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5088-5090
-
-
Woese, C.R.1
Fox, G.E.2
-
35
-
-
0035852703
-
Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8
-
Yamada, K., Kunishima, N., Mayanagi, K., Ohnishi, T., Nishino, T., Iwasaki, H., Shinagawa, H., and Morikawa, K. (2001) Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8, Proc. Natl. Acad. Sci. USA 98, 1442-1447.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 1442-1447
-
-
Yamada, K.1
Kunishima, N.2
Mayanagi, K.3
Ohnishi, T.4
Nishino, T.5
Iwasaki, H.6
Shinagawa, H.7
Morikawa, K.8
-
36
-
-
0029881549
-
Extensible and object-oriented system Eos supplies a new environment for image analysis of electron micrographs of macromolecules
-
Yasunaga, T., and Wakabayashi, T. (1996) Extensible and object-oriented system Eos supplies a new environment for image analysis of electron micrographs of macromolecules, J. Struct. Biol. 116, 155-160.
-
(1996)
J. Struct. Biol.
, vol.116
, pp. 155-160
-
-
Yasunaga, T.1
Wakabayashi, T.2
-
37
-
-
0031715606
-
Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP
-
Yu, R. C., Hanson, P. I., Jahn, R., and Brunger, A. T. (1998) Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP, Nat. Struct. Biol. 5, 803-811.
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 803-811
-
-
Yu, R.C.1
Hanson, P.I.2
Jahn, R.3
Brunger, A.T.4
-
38
-
-
0015295891
-
Methanobacterium thermoautotrophicus sp. n., an anaerobic, autotrophic, extreme thermophile
-
Zeikus, J. G., and Wolfe, R. S. (1972) Methanobacterium thermoautotrophicus sp. n., an anaerobic, autotrophic, extreme thermophile, J. Bacteriol. 109, 707-715.
-
(1972)
J. Bacteriol.
, vol.109
, pp. 707-715
-
-
Zeikus, J.G.1
Wolfe, R.S.2
|