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Volumn 67, Issue 8, 2001, Pages 3379-3384

Assessment of the Genetic Diversity among Strains of Xanthomonas cynarae by Randomly Amplified Polymorphic DNA Analysis and Development of Specific Characterized Amplified Regions for the Rapid Identification of X. cynarae

Author keywords

[No Author keywords available]

Indexed keywords

PRIMER DNA;

EID: 0035433954     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.67.8.3379-3384.2001     Document Type: Article
Times cited : (21)

References (36)
  • 1
    • 0030265338 scopus 로고    scopus 로고
    • Specific oligonucleotide primers for the identification of Pseudomonas svringae pv. pisi yield one of two possible DNA fragments by PCR amplification: Evidence for phylogenetic divergence
    • Arnold, D. L., A. Athey-Pollard, M. J. Gibbon, J. D. Taylor, and A. Vivian. 1996. Specific oligonucleotide primers for the identification of Pseudomonas svringae pv. pisi yield one of two possible DNA fragments by PCR amplification: evidence for phylogenetic divergence. Physiol. Mol. Plant Pathol. 49:233-245.
    • (1996) Physiol. Mol. Plant Pathol. , vol.49 , pp. 233-245
    • Arnold, D.L.1    Athey-Pollard, A.2    Gibbon, M.J.3    Taylor, J.D.4    Vivian, A.5
  • 3
    • 0042812650 scopus 로고    scopus 로고
    • Marker assisted selection in cauliflower (Brassica oleracea var. botrytis): Molecular mapping of a nuclear recessive male sterility gene
    • Barbeyron, G., and S. Boury. 1998. Marker assisted selection in cauliflower (Brassica oleracea var. botrytis): molecular mapping of a nuclear recessive male sterility gene. Acta Hortic. 459:149-156.
    • (1998) Acta Hortic. , vol.459 , pp. 149-156
    • Barbeyron, G.1    Boury, S.2
  • 4
    • 0033039480 scopus 로고    scopus 로고
    • Genetic diversity within Lactobacillus sakei and Lactobacillus curvatus and design of PCR primers for its detection using randomly amplified polymorphic DNA
    • Berthier, F., and S. D. Ehrlich. 1999. Genetic diversity within Lactobacillus sakei and Lactobacillus curvatus and design of PCR primers for its detection using randomly amplified polymorphic DNA. Int. J. Syst. Bacteriol. 49:997-1007.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 997-1007
    • Berthier, F.1    Ehrlich, S.D.2
  • 5
    • 0031416983 scopus 로고    scopus 로고
    • RAPD PCR-based differentiation of Xanthomonas campestris pv. phaseoli and Xanthomonas campestris pv. phaseoli var. fuscans
    • Birch, P. R. J., L. J. Hyman, R. Taylor, A. F. Opio, C. Bragard, and I. K. Toth. 1997. RAPD PCR-based differentiation of Xanthomonas campestris pv. phaseoli and Xanthomonas campestris pv. phaseoli var. fuscans. Eur. J. Plant Pathol. 103:809-814.
    • (1997) Eur. J. Plant Pathol. , vol.103 , pp. 809-814
    • Birch, P.R.J.1    Hyman, L.J.2    Taylor, R.3    Opio, A.F.4    Bragard, C.5    Toth, I.K.6
  • 7
    • 0031980174 scopus 로고    scopus 로고
    • Comparison of randomly amplified polymorphic DNA with amplified length polymorphism to assess genetic diversity and genetic relatedness within genospecies III of Pseudomonas syringae
    • Clerc, A., C. Manceau, and X. Nesme. 1998. Comparison of randomly amplified polymorphic DNA with amplified length polymorphism to assess genetic diversity and genetic relatedness within genospecies III of Pseudomonas syringae. Appl. Environ. Microbiol. 64:1180-1187.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 1180-1187
    • Clerc, A.1    Manceau, C.2    Nesme, X.3
  • 8
    • 0031808824 scopus 로고    scopus 로고
    • Analysis of intraspecific and interspecific variation in the genus Alternaria by the use of RAPD-PCR
    • Cooke, D. E. L., J. W. Forster, P. D. Jenkins, D. G. Jones, and D. M. Lewis. 1998. Analysis of intraspecific and interspecific variation in the genus Alternaria by the use of RAPD-PCR. Ann. Appl. Biol. 132:197-209.
    • (1998) Ann. Appl. Biol. , vol.132 , pp. 197-209
    • Cooke, D.E.L.1    Forster, J.W.2    Jenkins, P.D.3    Jones, D.G.4    Lewis, D.M.5
  • 9
    • 0342618294 scopus 로고    scopus 로고
    • Use of an arbitrarily primed PCR product in the development of a Campflobacter jejuni-specific PCR
    • Day, W. A., I. L. Pepper, and L. A. Joens. 1997. Use of an arbitrarily primed PCR product in the development of a Campflobacter jejuni-specific PCR. Appl. Environ. Microbiol. 63:1019-1023.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1019-1023
    • Day, W.A.1    Pepper, I.L.2    Joens, L.A.3
  • 10
    • 0028167778 scopus 로고
    • RAPD typing for distinguishing species and strains in the genus Listeria
    • Farber, J. M., and C. J. Addison. 1994. RAPD typing for distinguishing species and strains in the genus Listeria. J. Appl. Bacteriol. 77:242-250.
    • (1994) J. Appl. Bacteriol. , vol.77 , pp. 242-250
    • Farber, J.M.1    Addison, C.J.2
  • 11
    • 0031855786 scopus 로고    scopus 로고
    • Sensitive and specific detection of Clavibacter xyli subsp. xyli, causal agent of ratoon stunting disease of sugarcane, with a polymerase chain reaction-based assay
    • Fegan, M., B. J. Croft, D. S. Teakle, A. C. Hayward, and G. R. Smith. 1998. Sensitive and specific detection of Clavibacter xyli subsp. xyli, causal agent of ratoon stunting disease of sugarcane, with a polymerase chain reaction-based assay. Plant Pathol. 47:495-504.
    • (1998) Plant Pathol. , vol.47 , pp. 495-504
    • Fegan, M.1    Croft, B.J.2    Teakle, D.S.3    Hayward, A.C.4    Smith, G.R.5
  • 12
    • 0027136395 scopus 로고
    • The polymerase chain reaction and plant disease diagnosis
    • Henson, J. M., and R. French. 1993. The polymerase chain reaction and plant disease diagnosis. Annu. Rev. Phytopathol. 31:82-109.
    • (1993) Annu. Rev. Phytopathol. , vol.31 , pp. 82-109
    • Henson, J.M.1    French, R.2
  • 13
    • 0001759286 scopus 로고
    • Inheritance of RAPDs in F1 hybrids of corn
    • Heun, M., and T. Helentjaris. 1993. Inheritance of RAPDs in F1 hybrids of corn. Theor. Appl. Genet. 85:961-968.
    • (1993) Theor. Appl. Genet. , vol.85 , pp. 961-968
    • Heun, M.1    Helentjaris, T.2
  • 15
    • 0027203068 scopus 로고
    • Development of a random amplification of polymorphic DNa typing method for Listeria monocytogenes
    • Lawrence, L. M., J. Harvey, and A. Gilmore. 1993. Development of a random amplification of polymorphic DNA typing method for Listeria monocytogenes. Appl. Environ. Microbiol. 59:3117-3119.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 3117-3119
    • Lawrence, L.M.1    Harvey, J.2    Gilmore, A.3
  • 16
    • 0027987983 scopus 로고
    • Sensitive and specific detection of Xanthomonas campestris pv. pelargonii with DNA primers and probes identified by random amplified polymorphic DNA analysis
    • Manulis, S., L. Valinsky, A. Lichter, and D. W. Gabriel. 1994. Sensitive and specific detection of Xanthomonas campestris pv. pelargonii with DNA primers and probes identified by random amplified polymorphic DNA analysis. Appl. Environ. Microbiol. 60:4094-4099.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 4094-4099
    • Manulis, S.1    Valinsky, L.2    Lichter, A.3    Gabriel, D.W.4
  • 17
    • 0001042436 scopus 로고
    • Tween media for semi-selective isolation of Xanthomonas campestris pv. vesicatoria from soil and plant material
    • McGuire, R. G., J. B. Jones, and M. Sasser. 1986. Tween media for semi-selective isolation of Xanthomonas campestris pv. vesicatoria from soil and plant material. Plant Dis. 70:887-891.
    • (1986) Plant Dis. , vol.70 , pp. 887-891
    • McGuire, R.G.1    Jones, J.B.2    Sasser, M.3
  • 18
    • 0030993114 scopus 로고    scopus 로고
    • Characterization of Erwinia amylovora strains using random amplified polymorphic DNA fragments (RAPDs)
    • Momol, M. T., E. A. Momol, W. F. Lamboy, J. L. Norelli, S. V. Beer, and H. S. Aldwinckle. 1997. Characterization of Erwinia amylovora strains using random amplified polymorphic DNA fragments (RAPDs). J. Appl. Microbiol. 82:389-398.
    • (1997) J. Appl. Microbiol. , vol.82 , pp. 389-398
    • Momol, M.T.1    Momol, E.A.2    Lamboy, W.F.3    Norelli, J.L.4    Beer, S.V.5    Aldwinckle, H.S.6
  • 19
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei, M., and W. H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76:5269-5273.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.H.2
  • 20
    • 34250079231 scopus 로고
    • Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce
    • Paran, I., and R. W. Michelmore. 1993. Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theor. Appl. Genet. 85:985-993.
    • (1993) Theor. Appl. Genet. , vol.85 , pp. 985-993
    • Paran, I.1    Michelmore, R.W.2
  • 21
    • 0001364545 scopus 로고    scopus 로고
    • Identification of Erwinia carotovora from soft rot diseased plants by random amplified polymorphic DNA (RAPD) analysis
    • Parent, J. G., M. Lacroix, D. Pagé, L. Vézina, and S. Végiard. 1996. Identification of Erwinia carotovora from soft rot diseased plants by random amplified polymorphic DNA (RAPD) analysis. Plant Dis. 80:494-499.
    • (1996) Plant Dis. , vol.80 , pp. 494-499
    • Parent, J.G.1    Lacroix, M.2    Pagé, D.3    Vézina, L.4    Végiard, S.5
  • 22
    • 0029014694 scopus 로고
    • Genetic relationships among strains of Xylella fastidiosa from RAPD-PCR data
    • Pooler, M. R., and J. S. Hartung. 1995. Genetic relationships among strains of Xylella fastidiosa from RAPD-PCR data. Curr. Microbiol. 31:134-137.
    • (1995) Curr. Microbiol. , vol.31 , pp. 134-137
    • Pooler, M.R.1    Hartung, J.S.2
  • 23
    • 0028866731 scopus 로고
    • Specific PCR detection and identification of Xylella fastidiosa strains causing citrus variegated chlorosis
    • Pooler, M. R., and J. S. Hartung. 1995. Specific PCR detection and identification of Xylella fastidiosa strains causing citrus variegated chlorosis. Curr. Microbiol. 31:377-381.
    • (1995) Curr. Microbiol. , vol.31 , pp. 377-381
    • Pooler, M.R.1    Hartung, J.S.2
  • 24
    • 0029829244 scopus 로고    scopus 로고
    • Genetic relationships among strains of Xanthomonas fragariae based on random amplified polymorphic DNA PCR, repetitive extragenic palindromic PCR, and enterobacterial repetitive intergenic consensus PCR data and generation of multiplexed PCR primers useful for the identification of this phytopathogen
    • Pooler, M. R., D. F. Ritchie, and J. S. Hartung. 1996. Genetic relationships among strains of Xanthomonas fragariae based on random amplified polymorphic DNA PCR, repetitive extragenic palindromic PCR, and enterobacterial repetitive intergenic consensus PCR data and generation of multiplexed PCR primers useful for the identification of this phytopathogen. Appl. Environ. Microbiol. 62:3121-3127.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 3121-3127
    • Pooler, M.R.1    Ritchie, D.F.2    Hartung, J.S.3
  • 25
    • 0042812649 scopus 로고
    • Sur une maladie nouvelle de l'artichaut (Cynara scolymus)
    • Ridé, M. 1956. Sur une maladie nouvelle de l'artichaut (Cynara scolymus). C. R. Acad. Sci. 243:174-177.
    • (1956) C. R. Acad. Sci. , vol.243 , pp. 174-177
    • Ridé, M.1
  • 26
    • 0040609490 scopus 로고    scopus 로고
    • Development of a polymerase chain reaction diagnostic test for the detection of the biotrophic pathogen Plasmopara halstedii in sunflower
    • Roeckel-Drevet, P., J. Tourvieille, J. R. Drevet, V. Says-Lesage, P. Nicolas, and D. Tourvieille de Labrouhe. 1999. Development of a polymerase chain reaction diagnostic test for the detection of the biotrophic pathogen Plasmopara halstedii in sunflower. Can. J. Microbiol. 45:797-803.
    • (1999) Can. J. Microbiol. , vol.45 , pp. 797-803
    • Roeckel-Drevet, P.1    Tourvieille, J.2    Drevet, J.R.3    Says-Lesage, V.4    Nicolas, P.5    De Tourvieille Labrouhe, D.6
  • 27
    • 0031766055 scopus 로고    scopus 로고
    • Transmission frequency of Clavibacter michiganensis subsp. insidiosus to alfalfa seed and identification of the bacterium by PCR
    • Samac, D. A., R. J. Nix, and A. E. Oleson. 1998. Transmission frequency of Clavibacter michiganensis subsp. insidiosus to alfalfa seed and identification of the bacterium by PCR. Plant Dis. 82:1362-1367.
    • (1998) Plant Dis. , vol.82 , pp. 1362-1367
    • Samac, D.A.1    Nix, R.J.2    Oleson, A.E.3
  • 29
    • 0028454137 scopus 로고
    • Characterization of random amplified polymorphic DNA (RAPD) products from Xanthomonas campesiris and some comments on the use of RAPD products in phylogenetic analysis
    • Smith, J. J., J. S. Scott-Craig, J. R. Leadbetter, G. L. Bush, D. L. Roberts, and D. W. Fulbright. 1994. Characterization of random amplified polymorphic DNA (RAPD) products from Xanthomonas campesiris and some comments on the use of RAPD products in phylogenetic analysis. Mol. Phylogenet. Evol. 3:135-145.
    • (1994) Mol. Phylogenet. Evol. , vol.3 , pp. 135-145
    • Smith, J.J.1    Scott-Craig, J.S.2    Leadbetter, J.R.3    Bush, G.L.4    Roberts, D.L.5    Fulbright, D.W.6
  • 30
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
    • (1975) J. Mol. Biol. , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 31
    • 0032446559 scopus 로고    scopus 로고
    • Molecular diversity and relationship within Lactococcus lactis, as revealed by randomly amplified polymorphic DNA (RAPD)
    • Tailliez, P., J. Tremblay, S. D. Ehrlich, and A. Chopin. 1998. Molecular diversity and relationship within Lactococcus lactis, as revealed by randomly amplified polymorphic DNA (RAPD). Syst. Appl. Microbiol. 21:530-538.
    • (1998) Syst. Appl. Microbiol. , vol.21 , pp. 530-538
    • Tailliez, P.1    Tremblay, J.2    Ehrlich, S.D.3    Chopin, A.4
  • 32
    • 0033054302 scopus 로고    scopus 로고
    • RAPD and rep PCR-based fingerprinting of vascular bacterial pathogens of Musa spp
    • Thwaites, R., J. Mansfield, S. Eden-Green, and S. Seal. 1999. RAPD and rep PCR-based fingerprinting of vascular bacterial pathogens of Musa spp. Plant Pathol. 48:121-128.
    • (1999) Plant Pathol. , vol.48 , pp. 121-128
    • Thwaites, R.1    Mansfield, J.2    Eden-Green, S.3    Seal, S.4
  • 33
    • 0343193325 scopus 로고    scopus 로고
    • Genomic and phenotypic characterization of Xanthomonas cynarae: A new species causing bacterial bract spot of artichoke (Cynara scolymus L.)
    • Trébaol, G., L. Gardan, C. Manceau, J. L. Tanguy, Y. Tirilly, and S. Boury. 2000. Genomic and phenotypic characterization of Xanthomonas cynarae: a new species causing bacterial bract spot of artichoke (Cynara scolymus L.). Int. J. Syst. Evol. Microbiol. 50:1471-1478.
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 1471-1478
    • Trébaol, G.1    Gardan, L.2    Manceau, C.3    Tanguy, J.L.4    Tirilly, Y.5    Boury, S.6
  • 35
    • 0031975753 scopus 로고    scopus 로고
    • Detection of the cassava bacterial blight pathogen. Xanthomonas axonopodis pv. manihotis, by polymerase chain reaction
    • Verdier, V., G. Mosquera, and K. Assigbétsé. 1998. Detection of the cassava bacterial blight pathogen. Xanthomonas axonopodis pv. manihotis, by polymerase chain reaction. Plant Dis. 82:79-83.
    • (1998) Plant Dis. , vol.82 , pp. 79-83
    • Verdier, V.1    Mosquera, G.2    Assigbétsé, K.3


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