-
2
-
-
0017681196
-
DNA sequencing with chain-terminating inhibitors
-
Sanger, F., Nicklen, S. & Coulson, A. R. DNA sequencing with chain-terminating inhibitors. Proc. Natl Acad. Sci. USA 74, 5463-5467 (1977).
-
(1977)
Proc. Natl Acad. Sci. USA
, vol.74
, pp. 5463-5467
-
-
Sanger, F.1
Nicklen, S.2
Coulson, A.R.3
-
3
-
-
0023047540
-
Fluorescence detection in automated DNA sequence analysis
-
Smith, L. M. et al. Fluorescence detection in automated DNA sequence analysis. Nature 321, 674-679 (1986).
-
(1986)
Nature
, vol.321
, pp. 674-679
-
-
Smith, L.M.1
-
4
-
-
0026075541
-
Large-scale and automated DNA sequence determination
-
Hunkapiller, T., Kaiser, R. J., Koop, B. F. & Hood, L. Large-scale and automated DNA sequence determination. Science 254, 59-67 (1991).
-
(1991)
Science
, vol.254
, pp. 59-67
-
-
Hunkapiller, T.1
Kaiser, R.J.2
Koop, B.F.3
Hood, L.4
-
5
-
-
0033583046
-
Sequencing the genome, fast
-
Mullikin, J. C. & McMurray, A. A. Sequencing the genome, fast. Science 283, 1867-1868 (1999).
-
(1999)
Science
, vol.283
, pp. 1867-1868
-
-
Mullikin, J.C.1
McMurray, A.A.2
-
6
-
-
0035917840
-
Sequencing genomes and beyond
-
Meldrum, D. R. Sequencing genomes and beyond. Science 292, 515-516 (2001).
-
(2001)
Science
, vol.292
, pp. 515-516
-
-
Meldrum, D.R.1
-
7
-
-
0029023051
-
A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides
-
Tabor, S. & Richardson, C. C. A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides. Proc. Natl Acad. Sci. USA 92, 6339-6343 (1995).
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 6339-6343
-
-
Tabor, S.1
Richardson, C.C.2
-
8
-
-
0023440258
-
A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides
-
Prober, J. M. et al. A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides. Science 238, 336-341 (1987).
-
(1987)
Science
, vol.238
, pp. 336-341
-
-
Prober, J.M.1
-
9
-
-
0029055843
-
Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis
-
Ju, J., Ruan, C., Fuller, C. W., Glazer, A. N. & Mathies, R. A. Fluorescence energy transfer dye-labeled primers for DNA sequencing and analysis. Proc. Natl Acad. Sci. USA 92, 4347-4351 (1995).
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 4347-4351
-
-
Ju, J.1
Ruan, C.2
Fuller, C.W.3
Glazer, A.N.4
Mathies, R.A.5
-
10
-
-
0030830552
-
New dye-labeled terminators for improved DNA sequencing patterns
-
Rosenblum, B. B. et al. New dye-labeled terminators for improved DNA sequencing patterns. Nucleic Acids Res. 25, 4500-4504 (1997).
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4500-4504
-
-
Rosenblum, B.B.1
-
11
-
-
0029969377
-
Electrophoretically uniform fluorescent dyes for automated DNA sequencing
-
Metzker, M. L., Lu, J. & Gibbs, R. A. Electrophoretically uniform fluorescent dyes for automated DNA sequencing. Science 271, 1420-1422 (1996).
-
(1996)
Science
, vol.271
, pp. 1420-1422
-
-
Metzker, M.L.1
Lu, J.2
Gibbs, R.A.3
-
12
-
-
18244425276
-
New energy transfer dyes for DNA sequencing
-
Lee, L. G. et al. New energy transfer dyes for DNA sequencing. Nucleic Acids Res. 25, 2816-2822 (1997).
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2816-2822
-
-
Lee, L.G.1
-
13
-
-
0033824409
-
Automation for genomics. I. Preparation for sequencing
-
Meldrum, D. Automation for genomics. I. Preparation for sequencing. Genome Res. 10, 1081-1092 (2000).
-
(2000)
Genome Res.
, vol.10
, pp. 1081-1092
-
-
Meldrum, D.1
-
14
-
-
0033804353
-
Automation for genomics. II. Sequencers, microarrays, and future trends
-
Meldrum, D. Automation for genomics. II. Sequencers, microarrays, and future trends. Genome Res. 10, 1288-1303 (2000).
-
(2000)
Genome Res.
, vol.10
, pp. 1288-1303
-
-
Meldrum, D.1
-
15
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium. Initial sequencing and analysis of the human genome. Nature 409, 860-921 (2001).
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
16
-
-
0031955518
-
Base-calling of automated sequencer traces using Phred. I. Accuracy assessment
-
Ewing, B., Hillier, L., Wendl, M. C. & Green, P. Base-calling of automated sequencer traces using Phred. I. Accuracy assessment. Genome Res. 8, 175-185 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
17
-
-
0031978181
-
Base-calling of automated sequencer traces using Phred. II. Error probabilities
-
Ewing, B. & Green, P. Base-calling of automated sequencer traces using Phred. II. Error probabilities. Genome Res. 8, 186-194 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
18
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., Abajian, C. & Green, P. Consed: a graphical tool for sequence finishing. Genome Res. 8, 195-202 (1998). The most commonly used suite of computer programs for carrying out base calling, sequence assembly and viewing of sequence assemblies are Phred (references 16 and 17), Phrap and Consed (reference 18), respectively. Reference 20 describes an important extension of Consed (a program called Autofinish) that automates some of the key steps in sequence finishing.
-
(1998)
Genome Res.
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
19
-
-
0029592773
-
A new DNA sequence assembly program
-
Bonfield, J.K., Smith, K. F. & Staden, R. A new DNA sequence assembly program. Nucleic Acids Res. 23, 4992-4999 (1995).
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4992-4999
-
-
Bonfield, J.K.1
Smith, K.F.2
Staden, R.3
-
20
-
-
0035054380
-
Automated finishing with Autofinish
-
Gordon, D., Desmarais, C. & Green, P. Automated finishing with Autofinish. Genome Res. 11, 614-625 (2001).
-
(2001)
Genome Res.
, vol.11
, pp. 614-625
-
-
Gordon, D.1
Desmarais, C.2
Green, P.3
-
21
-
-
0031804086
-
A 'quality-first' credo for the Human Genome Project
-
Olson, M. & Green, P. A 'quality-first' credo for the Human Genome Project. Genome Res. 8, 414-415 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 414-415
-
-
Olson, M.1
Green, P.2
-
22
-
-
0033047270
-
Assessing the quality of the DNA sequence from the Human Genome Project
-
Felsenfeld, A., Peterson, J., Schloss, J. & Guyer, M. Assessing the quality of the DNA sequence from The Human Genome Project. Genome Res. 9, 1-4 (1999).
-
(1999)
Genome Res.
, vol.9
, pp. 1-4
-
-
Felsenfeld, A.1
Peterson, J.2
Schloss, J.3
Guyer, M.4
-
23
-
-
0032751021
-
High-throughput DNA sequencing: A genomic data manufacturing process
-
Huang, G. M. High-throughput DNA sequencing: a genomic data manufacturing process. DNA Seq. 10, 149-153 (1999).
-
(1999)
DNA Seq.
, vol.10
, pp. 149-153
-
-
Huang, G.M.1
-
24
-
-
0031788826
-
Automated sequence preprocessing in a large-scale sequencing environment
-
Wendl, M. C., Dear, S., Hodgson, D. & Hillier, L. Automated sequence preprocessing in a large-scale sequencing environment. Genome Res. 8, 975-984 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 975-984
-
-
Wendl, M.C.1
Dear, S.2
Hodgson, D.3
Hillier, L.4
-
25
-
-
0031976479
-
Kaleidaseq: A web-based tool to monitor data flow in a high throughput sequencing facility
-
Dedhia, N. N. & McCombie, W. R. Kaleidaseq: a web-based tool to monitor data flow in a high throughput sequencing facility. Genome Res. 8, 313-318 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 313-318
-
-
Dedhia, N.N.1
McCombie, W.R.2
-
26
-
-
0028074648
-
The Genome Reconstruction Manager: A software environment for supporting high-throughput DNA sequencing
-
Lawrence, C. B. et al. The Genome Reconstruction Manager: a software environment for supporting high-throughput DNA sequencing. Genomics 23, 192-201 (1994).
-
(1994)
Genomics
, vol.23
, pp. 192-201
-
-
Lawrence, C.B.1
-
27
-
-
0001284162
-
-
(eds Birren, B. et al.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Kimmel, B. E., Palazzolo, M. J., Martin, C. H., Boeke, J. D. & Devine, S. E. in Genome Analysis: A Laboratory Manual. 1. Analyzing DNA (eds Birren, B. et al.) 455-532 (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1997).
-
(1997)
Genome Analysis: A Laboratory Manual. 1. Analyzing DNA
, pp. 455-532
-
-
Kimmel, B.E.1
Palazzolo, M.J.2
Martin, C.H.3
Boeke, J.D.4
Devine, S.E.5
-
28
-
-
0024281402
-
Multiplex DNA sequencing
-
Church, G. M. & Kieffer-Higgins, S. Multiplex DNA sequencing. Science 240, 185-188 (1988).
-
(1988)
Science
, vol.240
, pp. 185-188
-
-
Church, G.M.1
Kieffer-Higgins, S.2
-
29
-
-
0028262287
-
Enzyme-linked fluorescent detection for automated multiplex DNA sequencing
-
Cherry, J. L. et al. Enzyme-linked fluorescent detection for automated multiplex DNA sequencing. Genomics 20, 68-74 (1994).
-
(1994)
Genomics
, vol.20
, pp. 68-74
-
-
Cherry, J.L.1
-
30
-
-
0030986553
-
Multiplex sequencing of 1.5 Mb of the Mycobacterium leprae genome
-
Smith, D. R. et al. Multiplex sequencing of 1.5 Mb of the Mycobacterium leprae genome. Genome Res. 7, 802-819 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 802-819
-
-
Smith, D.R.1
-
31
-
-
0019866677
-
The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing
-
Gardner, R. C. et al. The complete nucleotide sequence of an infectious clone of cauliflower mosaic virus by M13mp7 shotgun sequencing. Nucleic Acids Res. 9, 2871-2888 (1981).
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 2871-2888
-
-
Gardner, R.C.1
-
32
-
-
0019877035
-
Shotgun DNA sequencing using cloned DNase I-generated fragments
-
Anderson, S. Shotgun DNA sequencing using cloned DNase I-generated fragments. Nucleic Acids Res. 10, 3015-3027 (1981).
-
(1981)
Nucleic Acids Res.
, vol.10
, pp. 3015-3027
-
-
Anderson, S.1
-
33
-
-
0020465927
-
Nucleotide sequence of the bacteriophage lambda DNA
-
Sanger, F., Coulson, A. R., Hong, G. F., Hill, D. F. & Petersen, G. B. Nucleotide sequence of the bacteriophage lambda DNA. J. Mol. Biol. 162, 729-773 (1982). References 31-33 represent some of the earliest papers that reported the use of shotgun sequencing as a strategy for establishing the sequence of large pieces of DNA.
-
(1982)
J. Mol. Biol.
, vol.162
, pp. 729-773
-
-
Sanger, F.1
Coulson, A.R.2
Hong, G.F.3
Hill, D.F.4
Petersen, G.B.5
-
34
-
-
0021103457
-
Random subcloning of sonicated DNA: Application to shotgun DNA sequence analysis
-
Deininger, P. L. Random subcloning of sonicated DNA: application to shotgun DNA sequence analysis. Anal. Biochem. 129, 216-223 (1983).
-
(1983)
Anal. Biochem.
, vol.129
, pp. 216-223
-
-
Deininger, P.L.1
-
35
-
-
0035229676
-
The universal primers and the shotgun DNA sequencing method
-
Messing, J. The universal primers and the shotgun DNA sequencing method. Methods Mol. Biol. 167, 13-31 (2001).
-
(2001)
Methods Mol. Biol.
, vol.167
, pp. 13-31
-
-
Messing, J.1
-
36
-
-
0004032752
-
-
Wiley & Sons, Inc., New York
-
Ansorge, W., Voss, H. & Zimmermann, J. (eds) DNA Sequencing Strategies (Wiley & Sons, Inc., New York, 1997).
-
(1997)
DNA Sequencing Strategies
-
-
Ansorge, W.1
Voss, H.2
Zimmermann, J.3
-
37
-
-
0003436266
-
-
Academic, Inc., San Diego
-
Adams, M. D., Fields, C. & Venter, J. C. (eds) Automated DNA Sequencing and Analysis (Academic, Inc., San Diego, 1994).
-
(1994)
Automated DNA Sequencing and Analysis
-
-
Adams, M.D.1
Fields, C.2
Venter, J.C.3
-
38
-
-
0345866117
-
-
Blackwell Science Ltd, Oxford
-
Spurr, N. K., Young, B. D. & Bryant, S. P. (eds) ICRF Handbook of Genome Analysis (Blackwell Science Ltd, Oxford, 1998).
-
(1998)
ICRF Handbook of Genome Analysis
-
-
Spurr, N.K.1
Young, B.D.2
Bryant, S.P.3
-
39
-
-
0003644056
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Green, E. D., Birren, B., Klapholz, S., Myers, R. M. & Hieter, P. (eds) Genome Analysis: A Laboratory Manual Vols 1-4 (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1997).
-
(1997)
Genome Analysis: A Laboratory Manual
, vol.1-4
-
-
Green, E.D.1
Birren, B.2
Klapholz, S.3
Myers, R.M.4
Hieter, P.5
-
40
-
-
0031589946
-
The yeast genome directory
-
Goffeau, A. et al. The yeast genome directory. Nature 387, S1-S105 (1997). Describes the genome sequence of the first eukaryotic organism, the yeast Saccharomyces cerevisiae, by a collection of numerous sequencing groups (large and small) around the world.
-
(1997)
Nature
, vol.387
-
-
Goffeau, A.1
-
41
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
The C. elegans Sequencing Consortium. Genome sequence of the nematode C. elegans: a platform for investigating biology. Science 282, 2012-2018 (1998). Reports the genome sequence of the first multicellular organism, the nematode worm Caenorhabditis elegans, by the sequencing groups at Washington University and the Sanger Centre.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
-
42
-
-
0000465745
-
-
(eds Birren, B. et al.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Wilson, R. K. & Mardis, E. R. in Genome Analysis: A Laboratory Manual. 1. Analyzing DNA (eds Birren, B. et al.) 397-454 (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1997).
-
(1997)
Genome Analysis: A Laboratory Manual. 1. Analyzing DNA
, pp. 397-454
-
-
Wilson, R.K.1
Mardis, E.R.2
-
43
-
-
0024980741
-
A common language for physical mapping of the human genome
-
Olson, M., Hood, L., Cantor, C. & Botstein, D. A common language for physical mapping of the human genome. Science 245, 1434-1435 (1989).
-
(1989)
Science
, vol.245
, pp. 1434-1435
-
-
Olson, M.1
Hood, L.2
Cantor, C.3
Botstein, D.4
-
44
-
-
0000452444
-
-
(eds Birren, B. et al.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Vollrath, D. in Genome Analysis: A Laboratory Manual. 4. Mapping Genomes (eds Birren, B. et al.) 187-215 (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1999).
-
(1999)
Genome Analysis: A Laboratory Manual. 4. Mapping Genomes
, pp. 187-215
-
-
Vollrath, D.1
-
45
-
-
0023349389
-
Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors
-
Burke, D. T., Carle, G. F. & Olson, M. V. Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science 236, 806-812 (1987).
-
(1987)
Science
, vol.236
, pp. 806-812
-
-
Burke, D.T.1
Carle, G.F.2
Olson, M.V.3
-
46
-
-
0003644056
-
-
(eds Birren, B. et al.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Green, E. D., Hieter, P. & Spencer, F. A. in Genome Analysis: A Laboratory Manual. 3. Cloning Systems (eds Birren, B. et al.) 297-565 (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1998).
-
(1998)
Genome Analysis: A Laboratory Manual. 3. Cloning Systems
, pp. 297-565
-
-
Green, E.D.1
Hieter, P.2
Spencer, F.A.3
-
47
-
-
0026703169
-
Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
-
Shizuya, H. et al. Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. Proc. Natl Acad. Sci. USA 89, 8794-8797 (1992).
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 8794-8797
-
-
Shizuya, H.1
-
48
-
-
0028318417
-
A new bacteriophage P1-derived vector for the propagation of large human DNA fragments
-
Ioannou, P. A. et al. A new bacteriophage P1-derived vector for the propagation of large human DNA fragments. Nature Genet. 6, 84-89 (1994).
-
(1994)
Nature Genet.
, vol.6
, pp. 84-89
-
-
Ioannou, P.A.1
-
49
-
-
0029416826
-
An STS-based map of the human genome
-
Hudson, T. J. et al. An STS-based map of the human genome. Science 270, 1945-1954 (1995).
-
(1995)
Science
, vol.270
, pp. 1945-1954
-
-
Hudson, T.J.1
-
50
-
-
0029653653
-
A YAC contig map of the human genome
-
Chumakov, I. M. et al. A YAC contig map of the human genome. Nature 377, 175-297 (1995).
-
(1995)
Nature
, vol.377
, pp. 175-297
-
-
Chumakov, I.M.1
-
51
-
-
0030819029
-
A physical map of human chromosome 7: An integrated YAC contig map with average STS spacing of 79 kb
-
Bouffard, G. G. et al. A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb. Genome Res. 7, 673-692 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 673-692
-
-
Bouffard, G.G.1
-
52
-
-
14444286943
-
X chromosome map at 75-kb STS resolution, revealing extremes of recombination and GC content
-
Nagaraja, R. et al. X chromosome map at 75-kb STS resolution, revealing extremes of recombination and GC content. Genome Res. 7, 210-222 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 210-222
-
-
Nagaraja, R.1
-
53
-
-
0032787459
-
A YAC-based physical map of the mouse genome
-
Nusbaum, C. et al. A YAC-based physical map of the mouse genome. Nature Genet. 22, 388-393 (1999).
-
(1999)
Nature Genet.
, vol.22
, pp. 388-393
-
-
Nusbaum, C.1
-
54
-
-
0031263075
-
High throughput fingerprint analysis of large-insert clones
-
Marra, M. A. et al. High throughput fingerprint analysis of large-insert clones. Genome Res. 7, 1072-1084 (1997). Approach for constructing sequence-ready BAC contig maps by restriction enzyme digest-based fingerprint analysis. This general method, which essentially represents an extension of earlier mapping techniques (for example, see references 57-59), has been used to generate BAC contig maps of the human, mouse, Arabidopsis thaliana and other genomes.
-
(1997)
Genome Res.
, vol.7
, pp. 1072-1084
-
-
Marra, M.A.1
-
55
-
-
0031437595
-
Genome mapping by fluorescent fingerprinting
-
Gregory, S. G., Howell, G. R. & Bentley, D. R. Genome mapping by fluorescent fingerprinting. Genome Res. 7, 1162-1168 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 1162-1168
-
-
Gregory, S.G.1
Howell, G.R.2
Bentley, D.R.3
-
56
-
-
0023669069
-
The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library
-
Kohara, Y., Akiyama, K. & Isono, K. The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50, 495-508 (1987).
-
(1987)
Cell
, vol.50
, pp. 495-508
-
-
Kohara, Y.1
Akiyama, K.2
Isono, K.3
-
57
-
-
3442901662
-
Random-clone strategy for genomic restriction mapping in yeast
-
Olson, M. V. et al. Random-clone strategy for genomic restriction mapping in yeast. Proc. Natl Acad. Sci. USA 83, 7826-7830 (1986).
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 7826-7830
-
-
Olson, M.V.1
-
58
-
-
0027155419
-
Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs
-
Riles, L. et al. Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs. Genetics 134, 81-150 (1993).
-
(1993)
Genetics
, vol.134
, pp. 81-150
-
-
Riles, L.1
-
59
-
-
0000365871
-
Toward a physical map of the genome of the nematode Caenorhabditis elegans
-
Coulson, A., Sulston, J., Brenner, S. & Kam, J. Toward a physical map of the genome of the nematode Caenorhabditis elegans. Proc. Natl Acad. Sci. USA 83, 7821-7825 (1986). References 57-59 represent classic descriptions of restriction enzyme digest-based fingerprint analysis, as used to construct physical maps of the Saccharomyces cerevisiae and Caenorhabditis elegans genomes. In both cases, the resulting maps paved the way towards the sequencing of these genomes, as well as provided key insight into the strategies required for mapping and sequencing the human genome.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 7821-7825
-
-
Coulson, A.1
Sulston, J.2
Brenner, S.3
Kam, J.4
-
60
-
-
0032587020
-
A map for sequence analysis of the Arabidopsis thaliana genome
-
Marra, M. et al. A map for sequence analysis of the Arabidopsis thaliana genome. Nature Genet. 22, 265-270 (1999).
-
(1999)
Nature Genet.
, vol.22
, pp. 265-270
-
-
Marra, M.1
-
61
-
-
0032990408
-
A complete BAC-based physical map of the Arabidopsis thaliana genome
-
Mozo, T. et al. A complete BAC-based physical map of the Arabidopsis thaliana genome. Nature Genet. 22, 271-275 (1999).
-
(1999)
Nature Genet.
, vol.22
, pp. 271-275
-
-
Mozo, T.1
-
62
-
-
0035865087
-
A physical map of the human genome
-
The International Human Genome Mapping Consortium. A physical map of the human genome. Nature 409, 934-941 (2001). Paper reporting the BAC-based physical map of the human genome constructed by the Human Genome Project.
-
(2001)
Nature
, vol.409
, pp. 934-941
-
-
-
63
-
-
0024997934
-
Chromosomal region of the cystic fibrosis gene in yeast artificial chromosomes: A model for human genome mapping
-
Green, E. D. & Olson, M. V. Chromosomal region of the cystic fibrosis gene in yeast artificial chromosomes: a model for human genome mapping. Science 250, 94-98 (1990).
-
(1990)
Science
, vol.250
, pp. 94-98
-
-
Green, E.D.1
Olson, M.V.2
-
64
-
-
0031452751
-
Sequence ready - Or not?
-
McPherson, J. D. Sequence ready - or not? Genome Res. 7, 1111-1113 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 1111-1113
-
-
McPherson, J.D.1
-
65
-
-
0025283215
-
Automated DNA sequencing of the human HPRT locus
-
Edwards, A. et al. Automated DNA sequencing of the human HPRT locus. Genomics 6, 593-608 (1990).
-
(1990)
Genomics
, vol.6
, pp. 593-608
-
-
Edwards, A.1
-
66
-
-
0030859961
-
Representation of cloned genomic sequences in two sequencing vectors: Correlation of DNA sequence and subclone distribution
-
Chissoe, S. L. et al. Representation of cloned genomic sequences in two sequencing vectors: correlation of DNA sequence and subclone distribution. Nucleic Acids Res. 25, 2960-2966 (1997).
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2960-2966
-
-
Chissoe, S.L.1
-
67
-
-
0031722856
-
Analysis of the quality and utility of random shotgun sequencing at low redundancies
-
Bouck, J., Miller, W., Gorrell, J. H., Muzny, D. & Gibbs, R. A. Analysis of the quality and utility of random shotgun sequencing at low redundancies. Genome Res. 8, 1074-1084 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 1074-1084
-
-
Bouck, J.1
Miller, W.2
Gorrell, J.H.3
Muzny, D.4
Gibbs, R.A.5
-
68
-
-
0034649566
-
The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815 (2000). Describes the genome sequence of the first plant, Arabidopsis thaliana, by an international consortium of sequencing groups.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
69
-
-
0024281825
-
Genome linking with yeast artificial chromosomes
-
Coulson, A., Waterston, R., Kiff, J., Sulston, J. & Kohara, Y. Genome linking with yeast artificial chromosomes. Nature 335, 184-186 (1988).
-
(1988)
Nature
, vol.335
, pp. 184-186
-
-
Coulson, A.1
Waterston, R.2
Kiff, J.3
Sulston, J.4
Kohara, Y.5
-
70
-
-
0033759749
-
Decoding the human genome sequence
-
Bentley, D. R. Decoding the human genome sequence. Hum. Mol. Genet. 9, 2353-2358 (2000).
-
(2000)
Hum. Mol. Genet.
, vol.9
, pp. 2353-2358
-
-
Bentley, D.R.1
-
71
-
-
0032475832
-
The Human Genome Project: Reaching the finish line
-
Waterston, R. & Sulston, J. E. The Human Genome Project: reaching the finish line. Science 282, 53-54 (1998).
-
(1998)
Science
, vol.282
, pp. 53-54
-
-
Waterston, R.1
Sulston, J.E.2
-
72
-
-
0032428045
-
Toward a complete human genome sequence
-
The Sanger Centre & The Washington University Genome Sequencing Center. Toward a complete human genome sequence. Genome Res. 8, 1097-1108 (1998).
-
(1998)
Genome Res.
, vol.8
, pp. 1097-1108
-
-
-
73
-
-
0031791112
-
Coordination of human genome sequencing via a consensus framework map
-
Bentley, D. R., Pruitt, K. D., Deloukas, P., Schuler, G. D. & Ostell, J. Coordination of human genome sequencing via a consensus framework map. Trends Genet. 14, 381-384 (1998).
-
(1998)
Trends Genet.
, vol.14
, pp. 381-384
-
-
Bentley, D.R.1
Pruitt, K.D.2
Deloukas, P.3
Schuler, G.D.4
Ostell, J.5
-
74
-
-
79960655760
-
The DNA sequence of human chromosome 22
-
Dunham, I. et al. The DNA sequence of human chromosome 22. Nature 402, 489-495 (1999).
-
(1999)
Nature
, vol.402
, pp. 489-495
-
-
Dunham, I.1
-
75
-
-
0034682403
-
The DNA sequence of human chromosome 21
-
The Chromosome 21 Mapping and Sequencing Consortium. The DNA sequence of human chromosome 21. Nature 405, 311-319 (2000). References 74 and 75 announce the completion of finished sequence for the first two human chromosomes - 22 and 21, respectively.
-
(2000)
Nature
, vol.405
, pp. 311-319
-
-
-
76
-
-
0035865257
-
Integration of cytogenetic landmarks into the draft sequence of the human genome
-
The BAC Resource Consortium. Integration of cytogenetic landmarks into the draft sequence of the human genome. Nature 409, 953-958 (2001).
-
(2001)
Nature
, vol.409
, pp. 953-958
-
-
-
77
-
-
0035865094
-
Comparison of human genetic and sequence-based physical maps
-
Yu, A. et al. Comparison of human genetic and sequence-based physical maps. Nature 409, 951-953 (2001).
-
(2001)
Nature
, vol.409
, pp. 951-953
-
-
Yu, A.1
-
78
-
-
0032561502
-
A physical map of 30,000 human genes
-
Deloukas, P. et al. A physical map of 30,000 human genes. Science 282, 744-746 (1998).
-
(1998)
Science
, vol.282
, pp. 744-746
-
-
Deloukas, P.1
-
79
-
-
0035895559
-
A high-resolution radiation hybrid map of the human genome draft sequence
-
Olivier, M. et al. A high-resolution radiation hybrid map of the human genome draft sequence. Science 291, 1298-1302 (2001).
-
(2001)
Science
, vol.291
, pp. 1298-1302
-
-
Olivier, M.1
-
80
-
-
0029955205
-
A new strategy for genome sequencing
-
Venter, J. C., Smith, H. O. & Hood, L. A new strategy for genome sequencing. Nature 381, 364-366 (1996).
-
(1996)
Nature
, vol.381
, pp. 364-366
-
-
Venter, J.C.1
Smith, H.O.2
Hood, L.3
-
81
-
-
13044250476
-
Sequence-tagged connectors: A sequence approach to mapping and scanning the human genome
-
Mahairas, G. G. et al. Sequence-tagged connectors: a sequence approach to mapping and scanning the human genome, Proc. Natl Acad. Sci. USA 96, 9739-9744 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 9739-9744
-
-
Mahairas, G.G.1
-
82
-
-
0035107285
-
Theories and applications for sequencing randomly selected clones
-
Wendl, M. C. et al. Theories and applications for sequencing randomly selected clones. Genome Res. 11, 274-280 (2001).
-
(2001)
Genome Res.
, vol.11
, pp. 274-280
-
-
Wendl, M.C.1
-
83
-
-
0030775588
-
Strategies for whole microbial genome sequencing and analysis
-
Fraser, C. M. & Fleischmann, R. D. Strategies for whole microbial genome sequencing and analysis. Bectrophoresis 18, 1207-1216 (1997).
-
(1997)
Bectrophoresis
, vol.18
, pp. 1207-1216
-
-
Fraser, C.M.1
Fleischmann, R.D.2
-
84
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleischmann, R. D. et al. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269, 496-512 (1995). Publication reporting the genome sequence of the first prokaryotic organism, the bacterium Haemophilus influenzae. This effort was the first report of using a whole-genome shotgun-sequencing strategy to sequence the genome of a free-living organism.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
-
85
-
-
0034680168
-
Microbial genome sequencing
-
Fraser, C. M., Eisen, J. A. & Salzberg, S. L. Microbial genome sequencing. Nature 406, 799-803 (2000).
-
(2000)
Nature
, vol.406
, pp. 799-803
-
-
Fraser, C.M.1
Eisen, J.A.2
Salzberg, S.L.3
-
86
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
Adams, M. D. et al. The genome sequence of Drosophila melanogaster. Science 287, 2185-2195 (2000).
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
-
87
-
-
0034708758
-
A whole-genome assembly of Drosophila
-
Myers, E. W. et al. A whole-genome assembly of Drosophila. Science 287, 2196-2204 (2000). References 86 and 87 report the initial genome sequence of Drosophila melanogaster generated by a hybrid strategy that Involved both whole-genome shotgun sequencing and clone-by-clone shotgun sequencing. This project reflected a collaboration between the public Human Genome Project and Celera Genomics.
-
(2000)
Science
, vol.287
, pp. 2196-2204
-
-
Myers, E.W.1
-
88
-
-
0034708791
-
A BAC-based physical map of the major autosomes of Drosophila melanogaster
-
Hoskins, R. A. et al. A BAC-based physical map of the major autosomes of Drosophila melanogaster. Science 287, 2271-2274 (2000).
-
(2000)
Science
, vol.287
, pp. 2271-2274
-
-
Hoskins, R.A.1
-
89
-
-
0030950735
-
Human whole-genome shotgun sequencing
-
Weber, J. L. & Myers, E. W. Human whole-genome shotgun sequencing. Genome Res. 7, 401-409 (1997).
-
(1997)
Genome Res.
, vol.7
, pp. 401-409
-
-
Weber, J.L.1
Myers, E.W.2
-
90
-
-
0030972827
-
Against a whole-genome shotgun
-
Green, P. Against a whole-genome shotgun. Genome Res. 7, 410-417 (1997). References 89 and 90 provide point/counter-point perspectives that detail the opposing views on the use of a whole-genome shotgun-sequencing strategy for sequencing the human genome.
-
(1997)
Genome Res.
, vol.7
, pp. 410-417
-
-
Green, P.1
-
91
-
-
0032486191
-
Shotgun sequencing of the human genome
-
Venter, J. C. et al. Shotgun sequencing of the human genome. Science 280, 1540-1542 (1998).
-
(1998)
Science
, vol.280
, pp. 1540-1542
-
-
Venter, J.C.1
-
92
-
-
0035895505
-
The sequence of the human genome
-
Venter, J. C. et al. The sequence of the human genome. Science 291, 1304-1351 (2001). Landmark paper reporting the initial sequence of the human genome generated by Celera Genomics using a whole-genome shotgun-sequencing strategy in conjunction with available clone-by-clone data provided by the Human Genome Project.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
-
93
-
-
0034022927
-
Shotgun sample sequence comparisons between mouse and human genomes
-
Bouck, J. B., Metzker, M. L. & Gibbs, R. A. Shotgun sample sequence comparisons between mouse and human genomes. Nature Genet. 25, 31-33 (2000).
-
(2000)
Nature Genet.
, vol.25
, pp. 31-33
-
-
Bouck, J.B.1
Metzker, M.L.2
Gibbs, R.A.3
-
94
-
-
0035865322
-
A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms
-
The International SNP Map Working Group. A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms. Nature 409, 928-933 (2001).
-
(2001)
Nature
, vol.409
, pp. 928-933
-
-
-
95
-
-
0000508290
-
Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence
-
Crollius, H. R. et al. Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence. Nature Genet. 25, 235-238 (2000).
-
(2000)
Nature Genet.
, vol.25
, pp. 235-238
-
-
Crollius, H.R.1
-
96
-
-
0027507739
-
Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome
-
Brenner, S. et al. Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome. Nature 366, 265-268 (1993).
-
(1993)
Nature
, vol.366
, pp. 265-268
-
-
Brenner, S.1
-
97
-
-
0034714338
-
A primate genome project deserves high priority
-
McConkey, E. H. & Varki, A. A primate genome project deserves high priority. Science 289, 1295-1296 (2000).
-
(2000)
Science
, vol.289
, pp. 1295-1296
-
-
McConkey, E.H.1
Varki, A.2
-
98
-
-
0033832415
-
A chimpanzee genome project is a biomedical imperative
-
Varki, A. A chimpanzee genome project is a biomedical imperative. Genome Res. 10, 1065-1070 (2000).
-
(2000)
Genome Res.
, vol.10
, pp. 1065-1070
-
-
Varki, A.1
-
99
-
-
0034711356
-
Examining priorities for a primate genome project
-
VandeBerg, J. L., Williams-Blangero, S., Dyke, B. & Rogers, J. Examining priorities for a primate genome project. Science 290, 1504-1505 (2000).
-
(2000)
Science
, vol.290
, pp. 1504-1505
-
-
Vandeberg, J.L.1
Williams-Blangero, S.2
Dyke, B.3
Rogers, J.4
-
100
-
-
0030690108
-
FPC: A system for building contigs from restriction fingerprinted clones
-
Soderlund, C., Longden, I. & Mott, R. FPC: a system for building contigs from restriction fingerprinted clones. Comput. Appl. Biosci. 13, 523-535 (1997).
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 523-535
-
-
Soderlund, C.1
Longden, I.2
Mott, R.3
-
101
-
-
0033674122
-
Contigs built with fingerprints, markers, and FPC V4.7
-
Soderlund, C., Humphray, S., Dunham, A. & French, L. Contigs built with fingerprints, markers, and FPC V4.7. Genome Res. 10, 1772-1787 (2000).
-
(2000)
Genome Res.
, vol.10
, pp. 1772-1787
-
-
Soderlund, C.1
Humphray, S.2
Dunham, A.3
French, L.4
-
102
-
-
0034013059
-
International Rice Genome Sequencing Project: The effort to completely sequence the rice genome
-
Sasaki, T. & Burr, B. International Rice Genome Sequencing Project: the effort to completely sequence the rice genome. Curr. Opin. Plant Biol. 3, 138-141 (2000).
-
(2000)
Curr. Opin. Plant Biol.
, vol.3
, pp. 138-141
-
-
Sasaki, T.1
Burr, B.2
|