snoRNA nuclear import and potential for cotranscriptional function in pre-rRNA processing

RNA

Volumn 7, Issue 2, 2001, Pages 207-219

  Peculis, Brenda A ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

Nuclear import; Processing; Ribosomal RNA; Ribosome; snoRNA; U22 snoRNA; U8 snoRNA

Indexed keywords

DACTINOMYCIN; OLIGORIBONUCLEOTIDE; PRIMER DNA; RNA; RNA PRECURSOR; SMALL NUCLEAR RNA; SMALL NUCLEOLAR RNA;

ACTIVE TRANSPORT; ANIMAL; ARTICLE; CELL NUCLEUS MEMBRANE; CHEMISTRY; COMPARATIVE STUDY; CYTOPLASM; DRUG EFFECT; ENZYME SPECIFICITY; GENE TRANSLOCATION; GENETIC TRANSCRIPTION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROINJECTION; OOCYTE; PHYSIOLOGY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN SYNTHESIS; RIBOSOME; RNA PROCESSING; TIME; XENOPUS LAEVIS;

ACTIVE TRANSPORT, CELL NUCLEUS; ANIMALS; CYTOPLASM; DACTINOMYCIN; DNA PRIMERS; ELECTROPHORESIS, POLYACRYLAMIDE GEL; MICROINJECTIONS; NUCLEAR ENVELOPE; OLIGORIBONUCLEOTIDES; OOCYTES; PROTEIN BIOSYNTHESIS; RIBOSOMES; RNA; RNA PRECURSORS; RNA PROCESSING, POST-TRANSCRIPTIONAL; RNA, SMALL NUCLEAR; RNA, SMALL NUCLEOLAR; SUBSTRATE SPECIFICITY; TIME FACTORS; TRANSCRIPTION, GENETIC; TRANSLOCATION, GENETIC; XENOPUS LAEVIS;

EID: 0035259591     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838201001625     Document Type: Article

References (48)

1. Adamson ED, Woodland HR. 1977. Changes in the rate of histone synthesis during oocyte maturation and very early development of Xenopus laevis. Dev Biol 57:136-149.
2. Azum-Gelade MC, Noaillac-Depeyre J, Caizergues-Ferrer M, Gas N. 1994. Cell cycle redistribution of U3 snRNA and fibrillarin. Presence in the cytoplasmic nucleolus remnant and in the prenucleolar bodies at telophase. J Cell Sci 107:463-475.
3. Baserga SJ, Gilmore-Hebert M, Yang XW. 1992. Distinct molecular signals for nuclear import of the nucleolar snRNA, U3. Genes & Dev 6:1120-1130.
4. Baserga SJ, Yang XD, Steitz JA. 1991. An intact Box C sequence in the U3 snRNA is required for binding of fibrillarin, the protein common to the major family of nucleolar snRNPs. EMBO J 10:2645-2651.
5. Beltrame M, Henry Y, Tollervey D. 1994. Mutational analysis of an essential binding site for the U3 snoRNA in the 5′ external transcribed spacer of yeast pre-rRNA [corrected and republished in Nucleic Acids Res, 1994, 22:5139-5147]. Nucleic Acids Res 22:4057-4065.
6. Birkenmeier EH, Brown DD, Jordan E. 1978. A nuclear extract of Xenopus laevis oocytes that accurately transcribes 5S RNA genes. Cell 15:1077-1086.
7. Cavaille J, Nicoloso M, Bachellerie JP. 1996. Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides. Nature 333:732-735.
8. Cheng Y, Dahlberg JE, Lund E. 1995. Diverse effects of the guanine nucleotide exchange factor RCC1 on RNA transport. Science 267:1807-1810.
9. Gall JG, Murphy C, Callan H, Wu Z. 1991. Lampbrush chromosomes. In: Kay B, ed. Xenopus laevis: Practical uses in cell and molecular biology. San Diego: Academic Press, Inc. pp 149-166.
10. Ganot P, Bortolin M-L, Kiss T. 1997. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Cell 89:799-809.
11. Glibetic M, Larson DE, Sienna N, Bachellerie JP, Sells BH. 1992. Regulation of U3 snRNA expression during myoblast differentiation. Exp Cell Res 202:183-189.
12. Hadjiolov AA. 1985. The nucleolus and ribosome biogenesis. New York: Springer-Verlag.
13. Hadjiolova KV, Nicoloso M, Mazan S, Hadjiolov AA, Bachellerie JP. 1993. Alternative pre-rRNA processing pathways in human cells and their alteration by cycloheximide inhibition of protein synthesis. Eur J Biochem 212:211-215.
14. Haselbeck RC, Greer CL. 1993. Minimum intron requirements for tRNA splicing and nuclear transport in Xenopus oocytes. Biochemistry 32:8575-8581.
15. Henry Y, Wood H, Morrissey JP, Petfalski E, Kearsey S, Tollervey D. 1994. The 5′ end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site. EMBO J 13:2452-2463.
16. Jimenez-Garcia LF, Segura-Valdez ML, Ochs RL, Rothblum LI, Hannan R, Spector DL. 1994. Nucleologenesis: U3 snRNA-containing prenucleolar bodies move to sites of active pre-rRNA transcription after mitosis. Mol Biol Cell 5:955-966.
17. Kiss-Laszlo Z, Henry Y, Bachellerie JP, Caizergues-Ferrer M, Kiss T. 1996. Site-specific ribose methylation of preribosomal RNA: A novel function for small nucleolar RNAs. Cell 85:1077-1088.
18. Maden BEH, Hughes JMX. 1997. Eukaryotic ribosomal RNA: The recent excitement in the nucleotide modification problem. Chromosoma 105:391-400.
19. Matera AG, Tycowski KT, Steitz JA, Ward DC. 1994. Organization of small nucleolar ribonucleoproteins (snoRNPs) by fluorescence in situ hybridization and immunocytochemistry. Mol Biol Cell 5:1289-1299.
20. Mattaj IW, Tollervey D, Séraphin B. 1993. Small nuclear RNAs in messenger RNA and ribosomal RNA processing. FASEB J 7:47-53.
21. Mattoccia E, Baldi IM, Gandini-Attardi D, Ciafre S, Tocchini-Valentini GP. 1988. Site selection by the tRNA splicing endonuclease of Xenopus laevis. Cell 55:731-738.
22. Maxwell ES, Fournier MJ. 1995. The small nucleolar RNAs. Annu Rev Biochem 64:897-934.
23. Michaud N, Goldfarb D. 1992. Microinjected U snRNAs are imported to oocyte nuclei via the nuclear pore complex by three distinguishable targeting pathways. J Cell Biol 116:851-861.
24. Murdoch KJ, Allison LA. 1996. A role for ribosomal protein L5 in the nuclear import of 5S rRNA in Xenopus oocytes. Exp Cell Res 227:332-343.
25. Ni J, Tien AL, Fournier MJ. 1997. Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA. Cell 89: 565-573.
26. Nicoloso M, Qu LH, Michot B, Bachellerie JP. 1996. Intron-encoded, antisense small nucleolar RNAs: The characterization of nine novel species points to their direct role as guides for the 2′-O-ribose methylation of rRNAs. J Mol Biol 260:178-195.
27. Peculis B. 1997a. RNA processing: Pocket guides to ribosomal RNA. Curr Biol 7:R480-R482.
28. Peculis BA. 1997b. The sequence of the 5′ end of the U8 small nucleolar RNA is critical for 5.8S and 28S rRNA maturation. Mol Cell Biol 17:3702-3713.
29. Peculis BA, Mount SM. 1996. Ribosomal RNA: Small nucleolar RNAs make their mark. Curr Biol 6:1413-1415.
30. Peculis BA, Steitz JA. 1993. Disruption of U8 nucleolar snRNA Inhibits 5.8S and 28S rRNA processing in the Xenopus oocyte. Cell 73:1233-1245.
31. Peculis BA, Steitz JA. 1994. Sequence and structural elements critical for U8 snRNP function in Xenopus oocytes are evolutionarily conserved. Genes & Dev 8:2241-2255.
32. Peng HB. 1991. Xenopus laevis: Practical uses in cell and molecular biology. Solutions and protocols. Methods Cell Biol 36:657-662.
33. Puvion-Dutilleul F, Mazan S, Nicoloso M, Pichard E, Bachellerie JP, Puvion E. 1992. Alterations of nucleolar ultrastructure and ribosome biogenesis by actinomycin D. Implications for U3 snRNP function. Eur J Cell Biol 58:149-162.
34. Puvion-Dutilleul F, Puvion E, Bachellerie JP. 1997. Early stages of pre-rRNA formation within the nucleolar ultrastructure of mouse cells studied by in situ hybridization with a 5′ETS leader probe. Chromosome 105:496-505.
35. Savino R, Gerbi SA. 1990. In vivo disruption of Xenopus U3 snRNA affects ribosomal RNA processing. EMBO J 9:2299-2308.
36. Shiokawa K, Fu Y, Yamana K. 1987. Acceleration of the rate of processing of 40 S pre-rRNA during Xenopus laevis embryogenesis. Dev Biol 122:586-588.
37. Sienna N, Larson DE, Sells BH. 1996. Altered subcellular distribution of U3 snRNA in response to serum in mouse fibroblasts. Exp Cell Res 227:98-105.
38. Smith LD. 1991. Oogenesis and oocyte isolation. In: Kay BK, Peng HB, eds. Methods in cell biology. New York: Academic Press.
39. Speckmann W, Narayanan A, Terns R, Terns MP. 1999. Nuclear retention elements of U3 small nucleolar RNA. Mol Cell Biol 19:8412-8421.
40. Steitz JA, Tycowski KT. 1995. Small RNA chaperones for ribosome biogenesis. Science 270:1626-1627.
41. Terns MP, Dahlberg JE. 1994. Retention and 5′ cap trimethylation of U3 snRNA in the nucleus. Science 264:959-961.
42. Terns MP, Goldfarb DS. 1998. Nuclear transport of RNAs in micro-injected Xenopus oocytes. Methods Cell Biol 53:559-589.
43. Terns MP, Grimm C, Lund E, Dahlberg JE. 1995. A common maturation pathway for small nucleolar RNAs. EMBO J 14:4860-4871.
44. Tycowski KT, Shu MD, Steitz JA. 1994. Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation. Science 266:1558-1561.
45. Venema J, Tollervey D. 1999. Ribosome synthesis in Saccharomyces cerevisiae. Annu Rev Genet 33:261-311.
46. Weisenberger D, Scheer U. 1995. A possible mechanism for the inhibition of ribosomal RNA gene transcription during mitosis. J Cell Biol 129:561-575.
47. Yang H, Moss ML, Lund E, Dahlberg JE. 1992. Nuclear processing of the 3′-terminal nucleotides of pre-U1 RNA in Xenopus laevis oocytes. Mol Cell Biol 12:1553-1560.
48. Zanchin NI, Goldfarb DS. 1999. The exosome subunit Rrp43p is required for the efficient maturation of 5.8S, 18S and 25S rRNA. Nucleic Acids Res 27:1283-1288.