iSPOT: A web tool for the analysis and recognition of protein domain specificity

Comparative and Functional Genomics

Volumn 2, Issue 5, 2001, Pages 314-318

  Brannetti, Barbara ^a   Zanzoni, Andreas ^a   Montecchi Palazzi, Luisa ^a   Cesareni, Gianni ^a   Helmer Citterich, Manuela ^a  

^a UNIVERSITY OF ROME TOR VERGATA   (Italy)

Author keywords

Computational methods; Homology modelling; Molecular recognition; Prediction of specificity; Protein domains; Web tools

Indexed keywords

COMPUTER PROGRAM; DATA BASE; INFORMATION SYSTEM; INTERNET; MOLECULAR RECOGNITION; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN PROTEIN INTERACTION; REVIEW; SCORING SYSTEM;

EID: 0035168032     PISSN: 15316912     EISSN: None     Source Type: Journal    
DOI: 10.1002/cfg.104     Document Type: Review

References (8)

1. SH3-SPOT: An algorithm to predict preferred ligands of different members of the SH3 gene family
2. Profile analysis: Detection of distantly related proteins
3. Identification of sequence pattern with profile analysis
4. Scheme for ranking potential HLA-A2 binding peptides based on independent binding of individual peptide side-chains
5. SYFPEITHI: Database for MHC ligands and peptides motifs
6. Protein structure prediction - Principles and approaches
7. Distinct binding specificity of the multiple PDZ domains of the human INADL, a human protein with homology to INAD from Drosophila melanogaster