Reverse dot blot assay (insertion site typing) for precise detection of sites of IS6110 insertion in the Mycobacterium tuberculosis genome

Journal of Clinical Microbiology

Volumn 39, Issue 3, 2001, Pages 871-878

  Steinlein, L M ^a   Crawford, J T ^a  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

ARTICLE; BACTERIUM ISOLATION; EPIDEMIC; GENE INSERTION SEQUENCE; GENOME; GENOTYPE; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TUBERCULOSIS;

BACTERIAL TYPING TECHNIQUES; DNA TRANSPOSABLE ELEMENTS; GENE AMPLIFICATION; GENOME, BACTERIAL; HUMANS; MYCOBACTERIUM TUBERCULOSIS; OLIGONUCLEOTIDE PROBES; POLYMERASE CHAIN REACTION; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; TUBERCULOSIS, PULMONARY;

ACTINOBACTERIA (CLASS); BACTERIA (MICROORGANISMS); MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS; PROKARYOTA; UNCULTURED ACTINOMYCETE;

EID: 0035095873     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.39.3.871-878.2001     Document Type: Article

References (21)

1. A prospective evaluation of the clinical value of nation-wide DNA fingerprinting of tuberculosis isolates in Denmark
2. Comparative evaluation of ligation-mediated PCR and spoligotyping as screening methods for genotyping of Mycobacterium tuberculosis strains
3. Evaluation of spoligotyping in a study of the transmission of Mycobacterium tuberculosis
4. A Mycobacterium tuberculosis IS6110 preferential locus (ipl) for insertion into the genome
5. Differences in the prevalence of IS6110 insertion sites in Mycobacterium tuberculosis strains: Low and high copy number of IS6110
6. Differentiation of Mycobacterium tuberculosis isolates by spoligotyping and IS6110 restriction fragment length polymorphism
7. Mixed-linker polymerase chain reaction: A new method for rapid fingerprinting of isolates of the Mycobacterium tuberculosis complex
8. Simultaneous detection and strain differentiation of Mycobaterium tuberculosis for diagnosis and epidemiology
9. Comparison of methods based on different molecular epidemiological markers for typing of Mycobacterium tuberculosis complex strains: Interlaboratory study of discriminatory power and reproducibility
10. Characterization of the phylogenetic distribution and chromosomal insertion sites of five IS6110 elements in Mycobacterium tuberculosis: Non-random integration in the dna A-dnaN region
11. DNA fingerprinting by infrequent-restriction-site amplification
12. Rapid detection and simultaneous strain differentiation of Mycobacterium tuberculosis complex bacteria by spoligotyping
13. Multiplex PCR assay specific for the multidrug-resistant strain W of Mycobacterium tuberculosis
14. Multiplex PCR assay to aid in the identification of the highly transmissible Mycobacterium tuberculosis strain CDC1551
15. Rapid discrimination of Mycobacterium tuberculosis complex strains by ligation-mediated PCR fingerprint analysis
16. Retrospective analysis of the Beijing family of Mycobacterium tuberculosis in preserved lung tissues
17. Mycobacterium species identification and rifampin resistance testing with high-density DNA probe arrays
18. Molecular epidemiology of tuberculosis: Coming of age
19. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: Recommendations for a standardized methodology
20. Genetic variation and evolutionary origin of the direct repeat locus of Mycobacterium tuberculosis complex bacteria
21. Detection of mutations in drug resistance genes of Mycobacterium tuberculosis by a dot-blot hybridization strategy