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Volumn 80, Issue 5, 2001, Pages 2350-2363

Conformational analysis of DNA-trinucleotide-hairpin-loop structures using a continuum solvent model

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0035041676     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(01)76205-4     Document Type: Article
Times cited : (35)

References (13)
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    • Modeling the three-dimensional structure of RNA using discrete nucleotide conformational sets
    • Gautheret, D., F. Major, and R. Cedergren. 1993. Modeling the three-dimensional structure of RNA using discrete nucleotide conformational sets. J. Mol. Biol. 229:1049-1064.
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  • 5
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    • E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition
    • Glucksmann-Kuis, M. A., X. Dai, P. Markiewicz, and L. B. Rothman-Denes. 1996. E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition. Cell. 84:147-154.
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  • 6
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    • Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition
    • Glucksmann-Kuis, M. A., C. Malone, P. Markiewicz, and L. B. Rothman-Denes. 1992. Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition. Cell. 70:491-500.
    • (1992) Cell , vol.70 , pp. 491-500
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  • 7
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    • Parameterized models of aqueous free energies of solvation based on pairwise descreening of solute atomic charges from a dielectric medium
    • Hawkins, G. D., C. J. Cramer, and D. G. Truhlar. 1996. Parameterized models of aqueous free energies of solvation based on pairwise descreening of solute atomic charges from a dielectric medium. J. Phys. Chem. 100:19824-19839.
    • (1996) J. Phys. Chem. , vol.100 , pp. 19824-19839
    • Hawkins, G.D.1    Cramer, C.J.2    Truhlar, D.G.3
  • 8
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    • Structural features that give rise to the unusual stability of RNA hairpins containing GNRA tetraloops
    • Heus, H. A., and A. Pardi. 1991. Structural features that give rise to the unusual stability of RNA hairpins containing GNRA tetraloops. Science. 253:191-194.
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    • Heus, H.A.1    Pardi, A.2
  • 9
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    • Most compact hairpin-turn structure exerted by a short DNA fragment, d(GCGAAGC) in solution: An extraordinarily stable structure resistant to nuclease and heat
    • Hirao, I., G. Kawai, S. Yoshizawa, Y. Nishimura, Y. Ishido, K. Watanabe, and K. Miura. 1994. Most compact hairpin-turn structure exerted by a short DNA fragment, d(GCGAAGC) in solution: an extraordinarily stable structure resistant to nuclease and heat. Nucleic Acids Res. 22:576-582.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 576-582
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  • 10
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    • Extraordinarily stable mini-hairpins: Electrophoretical and thermal properties of the various sequence variants of d(GCGAAAGC) and their effects on DNA sequencing
    • Hirao, I., Y. Nishimura, Y. Tagawa, K. Watanabe, and K. Miura. 1992. Extraordinarily stable mini-hairpins: electrophoretical and thermal properties of the various sequence variants of d(GCGAAAGC) and their effects on DNA sequencing. Nucleic Acids Res. 20:3891-3896.
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  • 12
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.