NIFAS: Visual analysis of domain evolution in proteins

Bioinformatics

Volumn 17, Issue 4, 2001, Pages 343-348

  Storm, C E V ^a   Sonnhammer, E L L ^a  

^a KAROLINSKA INSTITUTE   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN KINASE C;

ARTICLE; COMPUTER GRAPHICS; COMPUTER PROGRAM; DATA BASE; GENE DELETION; GENE INSERTION; GENE SEQUENCE; GENETIC VARIABILITY; INFORMATION RETRIEVAL; INTERNET; MOLECULAR EVOLUTION; PHYLOGENY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FAMILY;

EID: 0035016852     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.4.343     Document Type: Article

References (11)

1. The Pfam protein families database
2. The Newick tree format
3. On the classification and evolution of protein modules
4. On the stochastic model for estimation of mutational distance between homologous proteins
5. Hidden Markov models in computational biology. Applications to protein modeling
6. Phylogenetic analysis & comparativegenomics
7. Interplay of C1 and C2 domains of protein kinase C-alpha in its membrane binding and activation
8. The neighbor-joining method: A new method for reconstructing phylogenetic trees
9. Functional and biochemical analysis of the C2 domains of synaptotagmin IV
10. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
11. Improved sensitivity of profile searches through the use of sequence weights and gap excision