Differentiation of mycobacterial species by PCR-restriction analysis of DNA (342 base pairs) of the RNA polymerase gene (rpoB)

Journal of Clinical Microbiology

Volumn 39, Issue 6, 2001, Pages 2102-2109

  Kim, B J ^a   Lee, K H ^a   Park, B N ^a   Kim, S J ^a   Bai, G H ^a   Kook, Y H ^a  

^a Seoul National University College of Medicine   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM IDENTIFICATION; LUNG LAVAGE; MYCOBACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SPECIES DIFFERENCE;

DNA RESTRICTION ENZYMES; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; DNA-DIRECTED RNA POLYMERASES; HUMANS; MOLECULAR SEQUENCE DATA; MYCOBACTERIUM; MYCOBACTERIUM INFECTIONS; POLYMERASE CHAIN REACTION;

ACTINOBACTERIA (CLASS); BACTERIA (MICROORGANISMS); CORYNEBACTERINEAE; MYCOBACTERIUM GASTRI; MYCOBACTERIUM KANSASII; MYCOBACTERIUM TUBERCULOSIS; UNCULTURED ACTINOMYCETE;

EID: 0035009631     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.39.6.2102-2109.2001     Document Type: Article

References (35)

1. Demonstration of Mycobacterium kansasii species heterogeneity by the amplification of the 16S-23S spacer region
2. Heterogeneity and clonality among isolates of Mycobacterium kansasii: Implications for epidemiological and pathogenicity studies
3. Incidence and clinical implications of isolation of Mycobacterium kansasii: Results of a 5-year, population-based study
4. Rapid identification of mycobacteria to species level by PCR-restriction fragment length polymorphism analysis of the hsp65 gene and proposition of an algorithm to differentiate 34 mycobacterial species
5. Molecular characterization of Mycobacterium avium complex isolates giving discordant results in AccuProbe tests by PCR-restriction enzyme analysis, 16S rRNA gene sequencing, and DT1-DT6 PCR
6. Restriction fragment length polymorphisms of 16S rRNA genes in the differentiation of fast-growing mycobacterial species
7. The occurrence of Mycobacterium kansasii in tapwater
8. Rapid differentiation of Mycobacterium avium and M. paratuberculosis by PCR and restriction enzyme analysis
9. Identification of mycobacteria from animals by restriction enzyme analysis and direct DNA cycle sequencing of polymerase chain reaction-amplified 16S rRNA gene sequences
10. Rapid characterization of Mycobacterium fortuitum-chelonei complex by restriction fragment length polymorphism of ribosomal RNA genes
11. Demonstration of homology between IS6110 of Mycobacterium tuberculosis and DNAs of other Mycobacterium spp.?
12. Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB)
13. The prevalence of environmental mycobacteria in drinking water supply systems in a demarcated region in Czech Republic, in the period 1984-1989
14. Species identification of mycobacteria by PCR-restriction fragment length polymorphism of the rpoB gene
15. Assessment of genetic markers for species differentiation within the Mycobacterium tuberculosis complex
16. IS6110 homologs are present in multiple copies in mycobacteria other than tuberculosis-causing mycobacteria
17. Mycobacterium
18. Genotypic characterization of five subspecies of Mycobacterium kansasii
19. Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis
20. Rapid, amplification-based finger-printing of Mycobacterium tuberculosis
21. Improved technique for isolation of Mycobacterium kansasii from water
22. Species-specific identification of Mycobacterium leprae by PCR-restriction fragment length polymorphism analysis of the hsp65 gene
23. Identification of Mycobacterium kansasii by using a DNA probe (AccuProbe) and molecular techniques
24. Towards a phylogeny and definition of species at the molecular level within the genus Mycobacterium
25. Nontuberculous mycobacterial disease in the immunocompetent adult
26. Identification of a genetically distinct subspecies of Mycobacterium kansasii
27. Mycobacterium haemophilum: Microbiology and expanding clinical and geographic spectra of disease in humans
28. PCR amplification and restriction endonuclease analysis of a 65-kilodalton heat shock protein gene sequence for taxonomic separation of rapidly growing mycobacteria
29. Nucleotide sequence comparison of the mycobacterial dnaJ gene and PCR-restriction fragment length polymorphism analysis for identification of mycobacterial species
30. Routine use of PCR-restriction fragment length polymorphism analysis for identification of mycobacteria growing in liquid media
31. Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis
32. IS6110, an IS-like element of Mycobacterium tuberculosis complex
33. Identification of Mycobacterium species by using amplified ribosomal DNA restriction analysis
34. Identification of an insertion, sequence-like element in a subspecies of Mycobacterium kansasii
35. Characterization of Mycobacterium tuberculosis strains from Vietnamese patients by Southern blot hybridization