Sequence diversity and interrelationships among isolates of satsuma dwarf-related viruses

Archives of Virology

Volumn 146, Issue 4, 2001, Pages 807-813

  Iwanami, T ^a   Kondo, Y ^a   Kobayashi, M ^a   Han, S S ^a   Karasev, A V ^b  

^a NATIONAL INSTITUTE OF FRUIT TREE SCIENCE   (Japan)

^b THOMAS JEFFERSON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CITRUS MOSAIC VIRUS; GENETIC RELATIONSHIP; GENETIC STRAIN; NATSUDAIDAI DWARF VIRUS; NAVEL ORANGE INFECTIOUS MOTTLING VIRUS; PHYLOGENETIC ANALYSIS; SATSUMA DWARF VIRUS; SPECIES DIVERSITY; VIRUS RNA;

3' UNTRANSLATED REGIONS; BASE SEQUENCE; CAPSID; CITRUS; GENES, VIRAL; MOLECULAR SEQUENCE DATA; NEPOVIRUS; PHYLOGENY; PLANT DISEASES; RNA, VIRAL; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; VARIATION (GENETICS);

CIMV STRAIN ND-1; CITRUS; CITRUS MOSAIC VIRUS; CITRUS SINENSIS; NAVEL ORANGE INFECTIOUS MOTTLING VIRUS; RNA VIRUSES; SATSUMA DWARF VIRUS;

EID: 0035003690     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050170149     Document Type: Article

References (22)

1. Ahlawat YS, Pant RP (1996) Association of a badnavirus with citrus mosaic disease in India. Plant Dis 80: 590-592
2. Azeri T (1973) First report of satsuma dwarf virus disease on satsuma mandarin in Turkey. Plant Dis Rep 57: 149-153
3. Barbara DJ, Ashby SC, McNamara DG (1985) Host range, purification and some properties of rubus Chinese seed-borne virus. Ann Appl Biol 107: 45-55
4. Chi PF, Gu CF, Roistacher CN (1991) Occurrence of satsuma dwarf virus in Zhejiang Province, China. Plant Dis 75: 242-244
5. (1995) PHYLIP-Phylogeny Inference Package (version 3.5). Department of Genetics, University of Washington, Seattle
6. Garnsey SM, Koizumi M (1988) Satsuma dwarf. In: Whiteside JO, Garnsey SM, Timmer LW (eds) Compendium of citrus diseases. APS Press, The American Phytopathological Society, St. Paul, pp 45-46
7. Goldbach R, Martelli GP, Milne RG (1995) Family Comovoridae. In: Murphy FA, Fauquet CM, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo MA, Summers MD (eds) Virus Taxonomy. Classification and Nomenclature of Viruses. Sixth Report of the International Committee on Taxonomy of Viruses. Springer, Wien New York, pp 341-347 (Arch Virol [Suppl] 10)
8. Hewick RM, Hunkerpiller MW, Hood LE, Dreyer WJ (1981) A gas-liquid solid phase peptide and protein sequenator. J Biol Chem 256: 7990-7997
9. Imada J (1984) Purification and some properties of natsudaidai dwarf virus. Bull Fruit Tree Res Stn E5: 55-59
10. Iwanami T, Koizumi M, Ieki H (1993) Diversity of properties among satsuma dwarf virus and related viruses. Ann Phytopathol Soc Jpn 59: 642-650
11. Iwanami T, Ieki H (1996) Nucleotide sequence of the coat protein genes of citrus mosaic virus. Virus Res 42: 181-186
12. Iwanami T, Yamao F, Seno T, Ieki H (1996) Nucleotide sequence of the 3′-terminal region of RNA1 of satsuma dwarf virus. Ann Phytopathol Soc Jpn 62: 4-10
13. Iwanami T, Kondo Y, Makita Y, Azeyanagi C, Ieki H (1998) The nucleotide sequence of the coat protein genes of satsuma dwarf virus and navel infectious mottling virus. Arch Virol 143: 405-412
14. Iwanami T, Kondo Y, Karasev AV (1999) Nucleotide sequences and taxonomy of satsuma dwarf virus. J Gen Virol 80: 793-797
15. Kreiah S, Strunk G, Cooper JI (1994) Sequence analysis and location of capsid proteins within RNA2 of strawberry latent ringspot virus. J Gen Virol 75: 2575-2532
16. Laemmli VK (1970) Cleavage of the structural proteins during the assembly of the head of bacteriophage T-4. Nature 227: 680-685
17. Nakazato H, Edmonds M (1974) Purification of messenger RNA and heterogeneous nuclear RNA containing poly(A) sequences. Methods Enzymol 29: 431-443
18. Remah A, Jones AT, Mitchell M J (1986) Purification and properties of lucerne Australian symptomless virus, a new virus infecting lucerne in Australia. Ann Appl Biol 109: 307-315
19. Tanaka K, Yamada S (1972) Evidence for a relationship among the viruses of satsuma dwarf, citrus mosaic, navel infectious mottling, natsudaidai dwarf, citrus variagation and citrus crinkley leaf. In: Price WC (ed) Proc. 5th Conf. IOCV. University of Florida Press, Florida, pp 71-76
20. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
21. Usugi T, Saito Y (1977) Some properties of satsuma dwarf virus. Ann Phytopathol Soc Jpn 43: 137-144
22. Usugi T, Saito Y (1979) Satsuma dwarf virus. CMI/AAB Descriptions of Plant Viruses No 208