-
1
-
-
0032928868
-
NMR assignments and secondary structure of the UvrC binding domain of UvrB
-
Alexandrovich A., Sanderson M.R., Moolenaar G.F., Goosen N., Lane A.N. NMR assignments and secondary structure of the UvrC binding domain of UvrB. FEBS Lett. 451:1999;181-185.
-
(1999)
FEBS Lett.
, vol.451
, pp. 181-185
-
-
Alexandrovich, A.1
Sanderson, M.R.2
Moolenaar, G.F.3
Goosen, N.4
Lane, A.N.5
-
2
-
-
0033105094
-
Conserved domains in DNA repair proteins and evolution of repair systems
-
Aravind L., Walker D.R., Koonin E.V. Conserved domains in DNA repair proteins and evolution of repair systems. Nucleic Acids Res. 27:1999;1223-1242.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1223-1242
-
-
Aravind, L.1
Walker, D.R.2
Koonin, E.V.3
-
4
-
-
0031039924
-
The limited strand-separating activity of the UvrAB protein complex and its role in the recognition of DNA damage
-
Gordienko I., Rupp W.D. The limited strand-separating activity of the UvrAB protein complex and its role in the recognition of DNA damage. EMBO J. 16:1997;889-895.
-
(1997)
EMBO J.
, vol.16
, pp. 889-895
-
-
Gordienko, I.1
Rupp, W.D.2
-
5
-
-
0034705293
-
Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily
-
Hopfner K.P., Karcher A., Shin D.S., Craig L., Arthur L.M., Carney J.P., Tainer J.A. Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily. Cell. 101:2000;789-800.
-
(2000)
Cell
, vol.101
, pp. 789-800
-
-
Hopfner, K.P.1
Karcher, A.2
Shin, D.S.3
Craig, L.4
Arthur, L.M.5
Carney, J.P.6
Tainer, J.A.7
-
6
-
-
0032518490
-
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: The crystal structure provides insights into the mode of unwinding
-
Kim J.L., Morgenstern K.A., Griffith J.P., Dwyer M.D., Thomson J.A., Murcko M.A., Lin C., Caron P.R. Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding. Structure. 6:1998;89-100.
-
(1998)
Structure
, vol.6
, pp. 89-100
-
-
Kim, J.L.1
Morgenstern, K.A.2
Griffith, J.P.3
Dwyer, M.D.4
Thomson, J.A.5
Murcko, M.A.6
Lin, C.7
Caron, P.R.8
-
7
-
-
0030740262
-
Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep Helicase bound to single-stranded DNA and ADP
-
Korolev S., Hsieh J., Gauss G.H., Lohmann T.M., Waksman G. Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep Helicase bound to single-stranded DNA and ADP. Cell. 90:1997;635-647.
-
(1997)
Cell
, vol.90
, pp. 635-647
-
-
Korolev, S.1
Hsieh, J.2
Gauss, G.H.3
Lohmann, T.M.4
Waksman, G.5
-
8
-
-
0026722539
-
Active site of (A)BC excinuclease. I. Evidence for 5′ incision by UvrC through a catalytic site involving Asp399, Asp438, Asp466, and His538 residues
-
Lin J.J., Sancar A. Active site of (A)BC excinuclease. I. Evidence for 5′ incision by UvrC through a catalytic site involving Asp399, Asp438, Asp466, and His538 residues. J. Biol. Chem. 267:1992;17688-17692.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 17688-17692
-
-
Lin, J.J.1
Sancar, A.2
-
9
-
-
0032717259
-
Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus
-
Machius M., Henry L., Palnitkar J., Deisenhofer J. Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus. Proc. Natl. Acad. Sci. USA. 86:1999;11717-11722.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 11717-11722
-
-
Machius, M.1
Henry, L.2
Palnitkar, J.3
Deisenhofer, J.4
-
10
-
-
0025917391
-
Dimerization of Escherichia coli UvrA and its binding to undamaged and ultraviolet-light damaged DNA
-
Mazur S.J., Grossman L. Dimerization of Escherichia coli UvrA and its binding to undamaged and ultraviolet-light damaged DNA. Biochemistry. 30:1991;4432-4443.
-
(1991)
Biochemistry
, vol.30
, pp. 4432-4443
-
-
Mazur, S.J.1
Grossman, L.2
-
11
-
-
0028066920
-
Helicase motifs V and VI of the Escherichia coli UvrB protein of the UvrABC endonuclease are essential for the formation of the preincision complex
-
Moolenaar G.F., Visse R., Ortiz-Buysse M., Goosen N., van de Putte P. Helicase motifs V and VI of the Escherichia coli UvrB protein of the UvrABC endonuclease are essential for the formation of the preincision complex. J. Mol. Biol. 240:1994;294-307.
-
(1994)
J. Mol. Biol.
, vol.240
, pp. 294-307
-
-
Moolenaar, G.F.1
Visse, R.2
Ortiz-Buysse, M.3
Goosen, N.4
Van De Putte, P.5
-
12
-
-
0029557494
-
The C-terminal region of the UvrB protein of Escherichia coli contains an important determinant for UvrC binding to the preincision complex but not the catalytic site for 3′ -incision
-
Moolenaar G.F., Franken K.L.M.C., Dijkstra D.M., Thomas-Oates J.E., Visse R., van de Putte P., Goosen N. The C-terminal region of the UvrB protein of Escherichia coli contains an important determinant for UvrC binding to the preincision complex but not the catalytic site for 3′ -incision. J. Biol. Chem. 270:1995;30508-30515.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 30508-30515
-
-
Moolenaar, G.F.1
Franken, K.L.M.C.2
Dijkstra, D.M.3
Thomas-Oates, J.E.4
Visse, R.5
Van De Putte, P.6
Goosen, N.7
-
13
-
-
0031423316
-
Function of the homologous regions of the Escherichia coli DNA excision repair proteins UvrB and UvrC in stabilization of the UvrBC-DNA complex in 3′ -incision
-
Moolenaar G.F., Franken K.L.M.C., van de Putte P., Goosen N. Function of the homologous regions of the Escherichia coli DNA excision repair proteins UvrB and UvrC in stabilization of the UvrBC-DNA complex in 3′ -incision. Mutat. Res. 385:1998;195-203.
-
(1998)
Mutat. Res.
, vol.385
, pp. 195-203
-
-
Moolenaar, G.F.1
Franken, K.L.M.C.2
Van De Putte, P.3
Goosen, N.4
-
14
-
-
0034677897
-
The effect of the DNA flanking the lesion on formation of the UvrB-DNA preincision complex. Mechanism for the UvrA-mediated loading of UvrB onto a DNA damage
-
Moolenaar G.F., Monaco V., van der Marel G.A., van Boom J.H., Visse R., Goosen N. The effect of the DNA flanking the lesion on formation of the UvrB-DNA preincision complex. Mechanism for the UvrA-mediated loading of UvrB onto a DNA damage. J. Biol. Chem. 275:2000;8038-8043.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 8038-8043
-
-
Moolenaar, G.F.1
Monaco, V.2
Van Der Marel, G.A.3
Van Boom, J.H.4
Visse, R.5
Goosen, N.6
-
15
-
-
0038957298
-
The role of ATP binding and hydrolysis by UvrB during nucleotide excision repair
-
Moolenaar G.F., Peòa Herron F., Monaco V., van der Marel G.A., van Boom J.H., Visse R., Goosen N. The role of ATP binding and hydrolysis by UvrB during nucleotide excision repair. J. Biol. Chem. 275:2000;8044-8050.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 8044-8050
-
-
Moolenaar, G.F.1
Peòa Herron, F.2
Monaco, V.3
Van Der Marel, G.A.4
Van Boom, J.H.5
Visse, R.6
Goosen, N.7
-
16
-
-
0033813441
-
The role of the Escherichia coli nucleotide excision repair proteins in DNA replication
-
Moolenaar G.F., Moorman C., Goosen N. The role of the Escherichia coli nucleotide excision repair proteins in DNA replication. J. Bacteriol. 182:2000;5706-5714.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5706-5714
-
-
Moolenaar, G.F.1
Moorman, C.2
Goosen, N.3
-
17
-
-
0025897229
-
Site-specific mutagenesis of conserved residues within Walker A and B sequences of Escherichia coli UvrA protein
-
Myles G.M., Hearst J.E., Sancar A. Site-specific mutagenesis of conserved residues within Walker A and B sequences of Escherichia coli UvrA protein. Biochemistry. 30:1991;3824-3834.
-
(1991)
Biochemistry
, vol.30
, pp. 3824-3834
-
-
Myles, G.M.1
Hearst, J.E.2
Sancar, A.3
-
18
-
-
0025808755
-
Isolation and characterization of functional domains of UvrA
-
Myles G.M., Sancar A. Isolation and characterization of functional domains of UvrA. Biochemistry. 30:1991;3834-3840.
-
(1991)
Biochemistry
, vol.30
, pp. 3834-3840
-
-
Myles, G.M.1
Sancar, A.2
-
19
-
-
0033376420
-
Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair
-
Nakagawa N., Sugahara M., Masui R., Kato R., Fukuyama K., Kuramitsu S. Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair. J. Biochem. 126:1999;986-990.
-
(1999)
J. Biochem.
, vol.126
, pp. 986-990
-
-
Nakagawa, N.1
Sugahara, M.2
Masui, R.3
Kato, R.4
Fukuyama, K.5
Kuramitsu, S.6
-
20
-
-
0024441308
-
Evidence from extended X-ray absorption fine-structure and site-specific mutagenesis for zinc fingers in UvrA protein of Escherichia coli
-
Navaratman S., Myles G.M., Strange R.W., Sancar A. Evidence from extended X-ray absorption fine-structure and site-specific mutagenesis for zinc fingers in UvrA protein of Escherichia coli. J. Biol. Chem. 264:1989;16067-16071.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 16067-16071
-
-
Navaratman, S.1
Myles, G.M.2
Strange, R.W.3
Sancar, A.4
-
21
-
-
0024357127
-
ATPase activity of the UvrA and UvrB protein complexes of the Escherichia coli UvrABC endonuclease
-
Oh E.Y., Claassen L., Thiagalingam S., Mazur S., Grossman L. ATPase activity of the UvrA and UvrB protein complexes of the Escherichia coli UvrABC endonuclease. Nucleic Acids Res. 17:1989;4145-4159.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 4145-4159
-
-
Oh, E.Y.1
Claassen, L.2
Thiagalingam, S.3
Mazur, S.4
Grossman, L.5
-
22
-
-
0024371067
-
The (A)BC excinuclease of Escherichia coli has only the UvrB and UvrC subunits in the incision complex
-
Orren D.K., Sancar A. The (A)BC excinuclease of Escherichia coli has only the UvrB and UvrC subunits in the incision complex. Proc. Natl. Acad. Sci. USA. 86:1989;5237-5241.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 5237-5241
-
-
Orren, D.K.1
Sancar, A.2
-
23
-
-
0029360376
-
The SMC proteins and the coming of age of the chromosome scaffold hypothesis
-
Saitoh N., Goldberg I., Earnshaw W.C. The SMC proteins and the coming of age of the chromosome scaffold hypothesis. BioEssays. 17:1995;759-766.
-
(1995)
BioEssays
, vol.17
, pp. 759-766
-
-
Saitoh, N.1
Goldberg, I.2
Earnshaw, W.C.3
-
24
-
-
0020053107
-
Purification and properties of the UvrA protein from Escherichia coli
-
Seeberg E., Steinum A. Purification and properties of the UvrA protein from Escherichia coli. Proc. Natl. Acad. Sci. USA. 79:1982;988-992.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 988-992
-
-
Seeberg, E.1
Steinum, A.2
-
25
-
-
0027905034
-
Molecular mechanism of transcription-repair coupling
-
Selby C.P., Sancar A. Molecular mechanism of transcription-repair coupling. Science. 260:1993;53-58.
-
(1993)
Science
, vol.260
, pp. 53-58
-
-
Selby, C.P.1
Sancar, A.2
-
26
-
-
0034661711
-
Common fold in helix-hairpin-helix proteins
-
Shao X., Grishin N.V. Common fold in helix-hairpin-helix proteins. Nucleic. Acids. Res. 28:2000;2643-2650.
-
(2000)
Nucleic. Acids. Res.
, vol.28
, pp. 2643-2650
-
-
Shao, X.1
Grishin, N.V.2
-
27
-
-
0033959604
-
Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-UvrC interaction
-
Sohi M., Alexandrovich A., Moolenaar G.F., Visse R., Goosen N., Vernede X., Fontecilla-Camps J., Champness J., Sanderson M.R. Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-UvrC interaction. FEBS Lett. 465:2000;161-164.
-
(2000)
FEBS Lett.
, vol.465
, pp. 161-164
-
-
Sohi, M.1
Alexandrovich, A.2
Moolenaar, G.F.3
Visse, R.4
Goosen, N.5
Vernede, X.6
Fontecilla-Camps, J.7
Champness, J.8
Sanderson, M.R.9
-
28
-
-
0033573066
-
Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair
-
Theis K., Chen P.J., Skorvaga M., Houten B.V., Kisker C. Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair. EMBO J. 18:1999;6899-6907.
-
(1999)
EMBO J.
, vol.18
, pp. 6899-6907
-
-
Theis, K.1
Chen, P.J.2
Skorvaga, M.3
Houten, B.V.4
Kisker, C.5
-
29
-
-
0034734379
-
The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch
-
Theis K., Skorvaga M., Machius M., Nakagawa N., Van Houten B., Kisker C. The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch. Mutation Res. 460:2000;277-300.
-
(2000)
Mutation Res.
, vol.460
, pp. 277-300
-
-
Theis, K.1
Skorvaga, M.2
Machius, M.3
Nakagawa, N.4
Van Houten, B.5
Kisker, C.6
-
30
-
-
0025859722
-
Both ATPase sites of Escherichia coli UvrA have functional roles in nucleotide excision repair
-
Thiagalingham S., Grossman L. Both ATPase sites of Escherichia coli UvrA have functional roles in nucleotide excision repair. J. Biol. Chem. 266:1991;11395-11403.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 11395-11403
-
-
Thiagalingham, S.1
Grossman, L.2
-
31
-
-
0033515425
-
Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism
-
Velankar S.S., Soultanas P., Dillingham M.S., Subramanya H.S., Wigley D.B. Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism. Cell. 97:1999;75-84.
-
(1999)
Cell
, vol.97
, pp. 75-84
-
-
Velankar, S.S.1
Soultanas, P.2
Dillingham, M.S.3
Subramanya, H.S.4
Wigley, D.B.5
-
32
-
-
0034681350
-
Catalytic sites for 3′ - And 5′ incision of E. coli nucleotide excision repair are both located in UvrC
-
Verhoeven E.E.A., van Kesteren M., Moolenaar G.F., Visse R., Goosen N. Catalytic sites for 3′ - and 5′ incision of E. coli nucleotide excision repair are both located in UvrC. J. Biol. Chem. 275:2000;5120-5123.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 5120-5123
-
-
Verhoeven, E.E.A.1
Van Kesteren, M.2
Moolenaar, G.F.3
Visse, R.4
Goosen, N.5
-
33
-
-
0027515237
-
The first zinc-binding domain of UvrA is not essential for UvrABC-mediated DNA excision repair
-
Visse R., de Ruijter M., Ubbink M., Brandsma J.A., van de Putte P. The first zinc-binding domain of UvrA is not essential for UvrABC-mediated DNA excision repair. Mutat. Res. 294:1993;263-274.
-
(1993)
Mutat. Res.
, vol.294
, pp. 263-274
-
-
Visse, R.1
De Ruijter, M.2
Ubbink, M.3
Brandsma, J.A.4
Van De Putte, P.5
-
34
-
-
0028307439
-
A mutational study of the C-terminal zinc-finger motif of the Escherichia coli UvrA protein
-
Wang J., Mueller K.L., Grossman L. A mutational study of the C-terminal zinc-finger motif of the Escherichia coli UvrA protein. J. Biol. Chem. 269:1994;10771-10775.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 10771-10775
-
-
Wang, J.1
Mueller, K.L.2
Grossman, L.3
-
35
-
-
0033199492
-
Strand opening by the UvrA(2)B complex allows dynamic recognition of DNA damage
-
Zou Y., Van Houten B. Strand opening by the UvrA(2)B complex allows dynamic recognition of DNA damage. EMBO J. 18:1999;4889-4901.
-
(1999)
EMBO J.
, vol.18
, pp. 4889-4901
-
-
Zou, Y.1
Van Houten, B.2
|