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Journal of Medical Virology

Volumn 64, Issue 3, 2001, Pages 325-333

Genetic characterization of hypervariable region 1 in patients chronically infected with hepatitis C virus genotype 2

(2) Fan, X a Di Bisceglie, A M a

a SAINT LOUIS UNIVERSITY SCHOOL OF MEDICINE (United States)

Author keywords

Genotype; Hepatitis; Quasi species

Indexed keywords

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; GENE CLUSTER; GENETIC ANALYSIS; GENOME; GENOTYPE; HEPATITIS C; HEPATITIS C VIRUS; HUMAN; HYPERVARIABLE REGION 1; MAJOR CLINICAL STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY;

AMINO ACID SEQUENCE; BASE SEQUENCE; BAYES THEOREM; COHORT STUDIES; COMPUTER SIMULATION; CONSENSUS SEQUENCE; CONSERVED SEQUENCE; EVOLUTION, MOLECULAR; GENOME, VIRAL; GENOTYPE; HEPACIVIRUS; HEPATITIS C, CHRONIC; HUMANS; LIKELIHOOD FUNCTIONS; MOLECULAR SEQUENCE DATA; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SOFTWARE; VARIATION (GENETICS);

HEPATITIS C VIRUS;

EID: 0034967685 PISSN: 01466615 EISSN: None Source Type: Journal
DOI: 10.1002/jmv.1054 Document Type: Article

Times cited : (7)

References (37)

1
- 0028798382
- Evaluation of branched DNA signal amplification for the detection of hepatitis C virus RNA
- (1995) J Viral Hepat , vol.2 , pp. 121-132
- Alter, H.J.¹ Sanchez-Pescador, R.² Urdea, M.S.³ Wilber, J.C.⁴ Lagier, R.J.⁵ Di Bisceglie, A.M.⁶ Shih, J.W.⁷ Neuwald, P.D.⁸

2
- 0346720473
- Genotype, viral load and age as independent predictors of treatment outcome of interferon-alpha 2a treatment in patients with chronic hepatitis C
- Construct group
- (1997) Scand J Infect Dis , vol.29 , pp. 17-22
- Bell, H.¹ Hellum, K.² Harthug, S.³ Maeland, A.⁴ Ritland, S.⁵ Myrvang, B.⁶ Von der Lippe, B.⁷ Raknerud, N.⁸ Skaug, K.⁹ Gutigard, B.G.¹⁰ Skjaerven, R.¹¹ Prescott, L.E.¹² Simmonds, P.¹³

3
- 0029064288
- Causes of HIV diversity
- (1995) Nature , vol.376 , pp. 125
- Bonhoeffer, S.¹ Holmes, E.C.² Nowakm, M.A.³

4
- 18344414346
- Predictors of sustained response, relapse and no response in patients with chronic hepatitis C treated with interferon-alpha
- (1995) Viral Hepat , vol.2 , pp. 91-96
- Chemello, L.¹ Cavalletto, L.² Noventa, F.³ Bonetti, P.⁴ Casarin, C.⁵ Bernardinello, E.⁶ Pontisso, P.⁷ Donada, C.⁸ Casarin, P.⁹ Belussi, F.¹⁰

5
- 0018110116
- Prediction of the secondary structure of proteins from their amino acid sequence
- (1978) Adv Enzymol Relat Areas Mol Biol , vol.47 , pp. 45-148
- Chou, P.Y.¹ Fasman, G.D.²

6
- 0034235427
- Iron reduction as an adjuvant to interferon therapy in patients with chronic hepatitis C who have previously not responded to interferon: A multicenter, prospective, randomized, controlled trial
- (2000) Hepatology , vol.32 , pp. 135-138
- Di Bisceglie, A.M.¹ Bonkovsky, H.² Krawitt, E.³ Grace, N.⁴ Killerberg, P.⁵ Hunt, C.⁶ Chopra, S.⁷ Reddy, P.K.⁸ Flamm, S.⁹ Tavill, A.S.¹⁰ Ferguson, R.¹¹ Tamburro, C.¹² Osmack, P.¹³ Bacon, B.R.¹⁴

7
- 0027222068
- Viral quasispecies
- (1993) Sci Am , vol.269 , pp. 42-49
- Eigen, M.¹

8
- 0029161576
- Comparison of full-length sequences of interferon-sensitive and resistant hepatitis C virus 1b. Sensitivity to interferon is conferred by amino acid substitutions in the NS5A region
- (1995) Clin Invest , vol.96 , pp. 224-230
- Enomoto, N.¹ Sakuma, I.² Asahina, Y.³ Kurosaki, M.⁴ Murakami, T.⁵ Yamamoto, C.⁶ Izumi, N.⁷ Marumo, F.⁸ Sato, C.⁹

9
- 0033135353
- Comparison of genetic heterogeneity of hepatitis C viral RNA in liver tissue and serum
- (1999) Am J Gastroenterol , vol.94 , pp. 1347-1354
- Fan, X.¹ Solomon, H.² Poulos, J.E.³ Neuschwander-Tetri, B.A.⁴ Di Bisceglie, A.M.⁵

10
- 0003437299
- Seattle, WA
- (1993) PHYLIP-phylogeny inference package (version 3.5)
- Felsenstein, J.¹

11
- 0031060165
- Human immunodeficiency virus type 1 genetic evolution in children with different rates of development of disease
- (1997) J Virol , vol.71 , pp. 663-677
- Ganeshan, S.¹ Dickover, R.E.² Korber, B.T.³ Bryson, Y.J.⁴ Wolinsky, S.M.⁵

12
- 0000075317
- Glover D, editor, London: IRL Press Ltd.
- (1985) DNA cloning , vol.1
- Hanahan, D.¹

13
- 0004747681
- Varying antibody response profile to HCV E2 in individuals infected with different genotypes
- Bethesda, MD. Abstract P228
- (1999) Sixth Int. Symposium on Hepatitis C and Related Viruses
- Hadlock, K.G.¹ Gish, R.² Rajyaguru, S.S.³ Rowe, J.⁴ Foung, S.K.H.⁵

14
- 0024234855
- CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
- (1988) Gene , vol.73 , pp. 237-244
- Higgins, D.G.¹ Sharp, P.M.²

15
- 0026021431
- Hypervariable region in the putative glycoprotein of hepatitis C virus
- (1991) Biochem Biophys Res Commun , vol.175 , pp. 220-228
- Hijikata, M.¹ Kato, N.² Ootsuyama, Y.³ Nakagawa, M.⁴ Ohkoshi, S.⁵ Shimotohno, K.⁶

16
- 0027081378
- Characterization of hypervariable regions in the putative envelope protein of hepatitis C virus
- (1992) Biochem Biophys Res Commun , vol.189 , pp. 119-127
- Kato, N.¹ Ootsuyama, Y.² Ohkoshi, S.³ Nakazawa, T.⁴ Sekiya, H.⁵ Hijikata, M.⁶ Shimotohno, K.⁷

17
- 0026335327
- Market sequence diversity in the putative envelope proteins of hepatitis C viruses
- (1992) Virus Res , vol.22 , pp. 107-123
- Kato, N.¹ Ootsuyama, Y.² Tanaka, T.³ Nakagawa, M.⁴ Nakazawa, T.⁵ Muraiso, K.⁶ Ohkoshi, S.⁷ Hijikata, M.⁸ Shimotohno, K.⁹

18
- 0029117598
- Hepatitis C virus genotypes 1 and 2 respond to interferon-alpha with different virologic kinetics
- (1995) J Infect Dis , vol.172 , pp. 934-938
- Kohara, M.¹ Anaka, T.² Tsukiyama-Kohara, K.³ Tanaka, S.⁴ Mizokami, M.⁵ Lau, J.Y.⁶ Hattori, N.⁷

19
- 0019296687
- A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
- (1980) J Mol Evol , vol.16 , pp. 111-120
- Kimura, M.¹

20
- 0003496662
- Pennsylvania State University, Philadelphia
- (1993) MEGA: Molecular Evolutionary Genetics Analysis, version 1.0
- Kimura, S.¹ Tamura, K.² Nei, M.³

21
- 0024973417
- Avoiding false positive with PCR
- (1989) Nature , vol.339 , pp. 327-328
- Kwok, S.¹ Higuchi, R.²

22
- 0020475449
- A simple method for displaying the hydropathic character of a protein
- (1982) J Mol Biol , vol.157 , pp. 105-132
- Kyte, J.¹ Doolittle, R.F.²

23
- 0003160461
- The divergence of species-specific abalone sperm lysins is promoted by positive Darwinian selection
- (1992) Biol Bull , vol.182 , pp. 97-104
- Lee, J.A.¹ Vacquier, V.D.²

24
- 0031901336
- Long term evolution of the hypervariable region of hepatitis C virus in a common-source-infected cohort
- (1998) J Virol , vol.72 , pp. 4893-4905
- McAllister, J.¹ Casino, C.² Davidson, F.³ Power, J.⁴ Lawlor, E.⁵ Yap, P.L.⁶ Simmonds, P.⁷ Smith, D.B.⁸

25
- 0022507362
- Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
- (1986) Mol Biol Evol , vol.3 , pp. 418-426
- Nei, M.¹ Gojobori, T.²

26
- 0032408707
- Classification, nomenclature, and database development for hepatitis C virus (HCV) and related viruses: Proposals for standardization
- (1998) Arch Virol , vol.143 , pp. 2493-2501
- Robertson, B.¹ Myers, G.² Howard, C.³ Brettin, T.⁴ Bukh, J.⁵ Gaschen, B.⁶ Gojobori, T.⁷ Maertens, G.⁸ Mizokami, M.⁹ Nainan, O.¹⁰ Netesov, S.¹¹ Nishioka, K.¹² Shin, I.T.¹³ Simmonds, P.¹⁴ Smith, D.¹⁵ Stuyver, L.¹⁶ Weiner, A.¹⁷

28
- 0023375195
- The neighbor-joining method: A new method for reconstructing phylogenetic trees
- (1987) Mol Biol Evol , vol.4 , pp. 406-425
- Saitou, N.¹ Nei, M.²

29
- 0027178527
- Typing of hepatitis C virus isolates and characterization of new subtypes using a line probe assay
- (1993) J Gen Virol , vol.74 , pp. 1093-1102
- Stuyver, L.¹ Rossau, R.² Wyseur, A.³ Duhamel, M.⁴ Vanderborght, B.⁵ Van Heuverswyn, H.⁶ Maertens, G.⁷

30
- 0027304173
- A structurally flexible and antigenically variable N-terminal domain of the hepatitis C virus E2/NSI protein: Implication for an escape from antibody
- (1993) Virology , vol.195 , pp. 297-301
- Taniguchi, S.¹ Okamoto, H.² Sakamoto, M.³ Kojima, M.⁴ Tsuda, F.⁵ Tanaka, T.⁶ Munekata, E.⁷ Muchmore, E.E.⁸ Peterson, D.A.⁹ Mishiro, S.¹⁰

31
- 0033516497
- Inhibition of the interferon-inducible protein kinase PKR by HCV E2 protein
- (1999) Science , vol.285 , pp. 107-110
- Taylor, D.R.¹ Shi, S.T.² Romano, P.R.³ Barber, G.N.⁴ Lai, M.M.C.⁵

32
- 0026025737
- Variable and hypervariable domains are found in the regions of HCV corresponding to the flavivirus envelope and NS1 proteins and the pestivirus envelope glycoproteins
- (1991) Virology , vol.180 , pp. 842-848
- Weiner, A.J.¹ Brauer, M.J.² Rosenblatt, J.³ Richman, K.H.⁴ Tung, J.⁵ Crawford, K.⁶ Bonino, F.⁷ Saracco, G.⁸ Choo, Q.L.⁹ Houghton, M.¹⁰ Han, J.H.¹¹

33
- 0028820333
- A new method of inference of ancestral nucleotide and amino acid sequences
- (1995) Genetics , vol.141 , pp. 1641-1650
- Yang, Z.¹ Kumar, S.² Nei, M.³

34
- 0031024880
- Humoral immune response to the hypervariable region of hepatitis C virus differs between genotypes 1b and 2a
- (1997) J Infect Dis , vol.175 , pp. 505-510
- Yoshioka, K.¹ Aiyama, T.² Okumura, A.³ Takayanagi, M.⁴ Iwata, K.⁵ Ishikawa, T.⁶ Nagai, Y.⁷ Kakuma, S.⁸

35
- 0030587906
- Hepatitis C virus genotypes in the United States: Epidemiology, pathogenicity, and response to interferon therapy
- Collaborative Study Group
- (1996) Ann Intern Med , vol.125 , pp. 634-639
- Zein, N.N.¹ Rakela, J.² Krawitt, E.L.³ Reddy, K.R.⁴ Tominaga, T.⁵ Persing, D.H.⁶

36
- 0031306932
- Small-sample tests of episodic adaptive evolution: A case study of primate lysozymes
- (1997) Mol Biol Evol , vol.14 , pp. 1335-1338
- Zhang, J.¹ Kumar, S.² Nei, M.³

37
- 0024477261
- On finding all suboptimal foldings of an RNA molecule
- (1989) Science , vol.244 , pp. 48-52
- Zuker, M.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.