SCOPUS 정보 검색 플랫폼

Bioinformatics

Volumn 17, Issue 7, 2001, Pages 587-601

Extending traditional query-based integration approaches for functional characterization of post-genomic data

(3) Eckman, Barbara A a Kosky, Anthony S b Laroco, Leonardo A a

a GLAXOSMITHKLINE (United States)

b Gene Logic Inc (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NEUROPEPTIDE; PROTEIN;

ARTICLE; CODON; COMPUTER PROGRAM; CONTROLLED STUDY; DATA ANALYSIS; DATA BASE; EXON; GENE EXPRESSION; GENE LOCATION; GENE SEQUENCE; GENE STRUCTURE; GENETIC ANALYSIS; GENETIC PROCEDURES; GENOME; HUMAN; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INTERNET; LICENSING; MEDICAL EDUCATION; MEDICAL INFORMATION; MEDICAL LITERATURE; MEDICAL RESEARCH; METHODOLOGY; NEOPLASM; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN MOTIF; QUALITY CONTROL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS; SYSTEM ANALYSIS;

EID: 0034903818 PISSN: 13674803 EISSN: 13674811 Source Type: Journal
DOI: 10.1093/bioinformatics/17.7.587 Document Type: Article

Times cited : (41)

References (50)

1
- 0344080156
- Concurrency control and recovery for global procedures in federated database systems
- (1987) IEEE Data Eng. Bull. , pp. 10
- Alonso, R.¹ Garcia-Molina, H.² Salem, K.³

2
- 0025183708
- Basic local alignment search tool
- (1990) J. Mol. Biol. , vol.215 , pp. 403-410
- Altschul, S.F.¹ Gish, W.² Miller, W.³ Myers, E.W.⁴ Lipman, D.J.⁵

3
- 0030801002
- Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
- (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
- Altschul, S.F.¹ Madden, T.L.² Schaffer, A.A.³ Zhang, J.⁴ Zhang, Z.⁵ Miller, W.⁶ Lipman, D.J.⁷

4
- 85037402739
- Apache Software Foundation Apache HTTP Server 1.3.1.
- (1995)

5
- 0028108989
- PRINTS-a database of protein motif fingerprints
- (1994) Nucleic Acids Res. , vol.22 , pp. 3590-3596
- Attwood, T.K.¹ Beck, M.E.² Bleasby, A.J.³ Parry-Smith, D.J.⁴

6
- 0033957834
- The SWISSOT protein sequence database and its supplement TrEMBL in 2000
- (2000) Nucleic Acids Res. , vol.1 , pp. 45-48
- Bairoch, A.¹ Apweiler, R.²

7
- 0031604395
- TAMBIS-Transparent Access to Multiple Bioinformatics Information Sources
- AAAI Press
- (1998) Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology , pp. 25-34
- Baker, P.G.¹ Brass, A.² Bechhofer, S.³ Goble, C.A.⁴ Paton, N.W.⁵ Stevens, S.⁶

8
- 0032810063
- An ontology for bioinformatics applications
- (1999) Bioinformatics , vol.15 , pp. 510-520
- Baker, P.G.¹ Goble, C.A.² Bechhofer, S.³ Paton, N.W.⁴ Stevens, R.⁵ Brass, A.⁶

9
- 0033976454
- GenBank
- (2000) Nucleic Acids Res. , vol.28 , pp. 15-18
- Benson, D.A.¹ Karsch-Mizrachi, I.² Lipman, D.J.³ Ostell, J.⁴ Rapp, B.A.⁵ Wheeler, D.L.⁶

10
- 0034098730
- Using GeneWise in the Drosophila annotation experiment
- [see comments]
- (2000) Genome Res. , vol.10 , pp. 547-548
- Birney, E.¹ Durbin, R.²

11
- 0029221422
- Towards heterogeneous multimedia information systems: The Garlic approach
- Bukhres O.A. et al. (eds), (RIDE '95). Taipei, Taiwan
- (1995) Proceedings of the International Workshop on Research Issues in Data Engineering , pp. 124-131
- Carey, M.J.¹ Haas, L.M.² Schwarz, P.M.³ Arya, M.⁴ Cody, W.F.⁵ Fagin, R.⁶ Flickner, M.⁷ Luniewski, A.⁸ Niblack, W.⁹ Petkovic, D.¹⁰ Thomas II, J.¹¹ Williams, J.H.¹² Wimmers, E.L.¹³

12
- 0000592249
- SRS: Analyzing and using data from heterogeneous textual databanks
- Letovsky,S.I. (ed.), Kluwer Academic, Boston
- (1999) Bioinformatics: Databases and Systems , pp. 213-231
- Carter, P.¹ Coupaye, T.² Kreil, D.P.³ Etzold, T.⁴

13
- 0003605891
- The Object Database Standard: ODMG-2.0
- Morgan Kaufmann, San Francisco, CA.
- (1996)
- Cattell, R.G.G.¹

14
- 33749767459
- An overview of the Object-Protocol Model and OPM data management tools
- (1995) Inf. Syst. , pp. 20
- Chen, I.A.¹ Markowitz, V.M.²

15
- 0004280480
- 3rd edn, Springer, New York.
- (1987) Programming in Prolog
- Clocksin, W.F.¹ Mellish, C.S.²

16
- 0029436725
- Challenges in integrating biological data
- (1995) J. Comput. Biol , vol.2 , pp. 557-572
- Davidson, S.B.¹ Overton, C.² Buneman, P.³

17
- 0001957926
- BioKleisli: A digital library for biomedicalresearchers
- (1997) Int. J. Digit. Libraries , vol.1 , pp. 36-53
- Davidson, S.B.¹ Overton, C.² Tannen, V.³ Wong, L.⁴

18
- 0001336049
- BioKleisli: Integrating biomedical data and analysis packages
- Letovsky,S.I. (ed.), Kluwer Academic, Boston
- (1999) Bioinformatics: Databases and Systems , pp. 201-211
- Davidson, S.B.¹ Buneman, O.P.² Crabtree, J.³ Tannen, V.⁴ Overton, G.C.⁵ Wong, L.⁶

19
- 85037413087
- Daylight Chemical Information Systems Inc.
- (2000)

20
- 85037417168
- DNA Data Bank of Japan, EMBL Nucleotide Sequence Database and GenBank The DDBJ/EMBL/GenBank Feature Table: Definition.
- (1999)

21
- 85037404322
- DoubleTwist Inc. DoubleTwist.com.
- (2000)

22
- 0031877015
- The Merck Gene Index browser: An extensible data integration system for gene finding, gene characterization and EST data mining
- (1998) Bioinformatics , vol.14 , pp. 2-13
- Eckman, B.A.¹ Aaronson, J.S.² Borkowski, J.A.³ Bailey, W.J.⁴ Elliston, K.O.⁵ Williamson, A.R.⁶ Blevins, R.A.⁷

23
- 0003818089
- HMMER: pPofile hidden markov models for sequence analysis
- (2000)
- Eddy, S.¹

24
- 0027457706
- SRS: An indexing and retrieval tool for flat file data libraries
- (1993) Comput. Appl. Biosci. , vol.9 , pp. 49-57
- Etzold, T.¹ Argos, P.²

25
- 0004363387
- Genetics Computer Group (GCG) Wisconsin Package Version 10.0. Madison, WI.
- (1998)

26
- 85037408685
- WU-BLAST 2.0. Washington University School of Medicine, St Louis, MO.
- (2000)
- Gish, W.¹

27
- 84952323782
- Integrating life sciences data-with a little garlic
- (BIBE 2000)
- (2000) IEEE Symposium on Bio-Informatics and Biomedical Engineering
- Haas, L.¹ Kodali, P.² Rice, J.³ Schwartz, P.⁴ Swope, W.⁵

28
- 0004362472
- Discovery Link: A system for integrating life sciences data
- in press
- (2000) IBM Syst. J.
- Haas, L.M.¹ Schwarz, P.M.² Kodali, P.³ Kotlar, E.⁴ Rice, J.E.⁵ Swope, W.C.⁶

29
- 0033985936
- Online Mendelian Inheritance in Man (OMIM)
- (2000) Hum. Mutat. , vol.15 , pp. 57-61
- Hamosh, A.¹ Scott, A.F.² Amberger, J.³ Valle, D.⁴ McKusick, V.A.⁵

30
- 84976715007
- A federated architecture for information management
- (1985) ACM Trans. Office Inf. Syst. , vol.3 , pp. 253-278
- Heimbigner, D.¹ McLeod, D.²

31
- 0032944238
- The PROSITE database, its status in 1999
- (1999) Nucleic Acids Res. , vol.27 , pp. 215-219
- Hofmann, K.¹ Bucher, P.² Falquet, L.³ Bairoch, A.⁴

32
- 85037412075
- IBM DataJoiner.
- (2000)

33
- 85037419501
- Inprise Corporation Visibroker for C++ 3.3. Inprise Corporation, Scotts Valley, CA.
- (1996)

34
- 84952323269
- A schemabased approach to building a bioinformatics database federation
- (BIBE 2000)
- (2000) IEEE International Symposium on Bio-Informatics and Biomedical Engineering , pp. 13-20
- Kemp, G.J.L.¹ Angelopoulos, N.² Gray, P.M.D.³

35
- 0002815764
- OPM: Object-Protocol Model Data Management Tools '97
- Letovsky,S.I. (ed.), Kluwer Academic, Boston
- (1999) Bioinformatics: Databases and Systems , pp. 187-199
- Markowitz, V.M.¹ Chen, I.A.² Kosky, A.S.³ Szeto, E.⁴

36
- 85037410732
- MDL Information Systems Inc.
- (2000)

37
- 0003497271
- The Essential CORBA: Systems Integration Using Distributed Objects
- Wiley, New York.
- (1995)
- Mowbray, T.J.¹ Zahavi, R.²

38
- 0031762950
- GeneCards: A novel functional genomics compendium with automated data mining and query reformulation support
- (1998) Bioinformatics , vol.14 , pp. 656-664
- Rebhan, M.¹ Chalifa-Caspi, V.² Prilusky, J.³ Lancet, D.⁴

39
- 0033967854
- GXD: A Gene Expression Database for the laboratory mouse: Current status and recent enhancements. The gene expression database group
- (2000) Nucleic Acids Res. , vol.28 , pp. 115-119
- Ringwald, M.¹ Eppig, J.T.² Kadin, J.A.³ Richardson, J.E.⁴

40
- 0025489261
- Federated database systems for managing distributed, heterogeneous, and autonomous databases
- (1990) ACM Comput. Surv. , vol.22 , pp. 183-236
- Sheth, A.P.¹ Larson, J.A.²

41
- 0019541764
- The functional data model and the data language DAPLEX
- (1981) ACM Trans. Database Syst. , vol.2 , pp. 140-173
- Shipman, D.¹

42
- 0030925920
- Pfam: A comprehensive database of protein domain families based on seed alignments
- (1997) Proteins , vol.28 , pp. 405-420
- Sonnhammer, E.L.¹ Eddy, S.R.² Durbin, R.³

43
- 85037402382
- Swiss Institute of Bioinformatics The ExPASy Molecular Biology Server.
- (2000)

44
- 0004363691
- Sybase Inc. Sybase Adaptive Server Enterprise Reference Manual, Sybase Inc.
- (1997)

45
- 0028129799
- A simple tool to search for sequence motifs that are conserved in BLAST outputs
- (1994) Comput. Appl. Biosci. , vol.10 , pp. 457-459
- Tatusov, R.L.¹ Koonin, E.V.²

46
- 0033289233
- Seamless integration of biological applications within a database framework
- Lengauer T. et al. (eds), Heidelberg, Germany
- (1999) Seventh International Conference on Intelligent Systems for Molecular Biology (ISMB'99) , pp. 272-281
- Topaloglou, T.¹ Kosky, A.² Markowitz, V.³

47
- 0004207406
- 2nd edn, O'Reilly, Sebastopol, CA.
- (1996) Programming Perl
- Wall, L.¹ Christiansen, T.² Schwartz, R.³

48
- 0033957466
- Database resources of the National Center for Biotechnology Information
- (2000) Nucleic Acids Res. , vol.28 , pp. 10-14
- Wheeler, D.L.¹ Chappey, C.² Lash, A.E.³ Leipe, D.D.⁴ Madden, T.L.⁵ Schuler, G.D.⁶ Tatusova, T.A.⁷ Rapp, B.A.⁸

49
- 0034542067
- The functional guts of the Kleisli query system
- Montreal, Canada
- (2000) Proceedings of the 5th ACM SIGPLAN International Conference on Functional Programming , pp. 1-10
- Wong, L.¹

50
- 0032169849
- Protein sequence similarity searches using patterns as seeds
- (1998) Nucleic Acids Res. , vol.26 , pp. 3896-3990
- Zhang, Z.¹ Schaffer, A.A.² Miller, W.³ Madden, T.L.⁴ Lipman, D.J.⁵ Koonin, E.V.⁶ Altschul, S.F.⁷

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.