A comparison of sole carbon source utilization patterns and phospholipid fatty acid profiles to detect changes in the root microflora of hydroponically grown crops

Canadian Journal of Microbiology

Volumn 47, Issue 4, 2001, Pages 302-308

  Khalil, S ^a   Baath E ^a   Alsanius, B ^a   Englund, J E ^a   Sundin, P ^a   Gertsson, U E ^a   Jensen P ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

Author keywords

Capsicum annum; Indigenous microflora; Lactuca sativa; Lycopersicon esculentum; Phospholipid fatty acid (PLFA) profiles; Sole carbon source utilization (SCSU) patterns

Indexed keywords

BIODIVERSITY; CARBON; CROPS; FATTY ACIDS; HARVESTING; PHOSPHOLIPIDS; PRINCIPAL COMPONENT ANALYSIS;

SOLE CARBON SOURCE UTILIZATION (SCSU);

MICROBIOLOGY;

CARBON; FATTY ACID;

CARBON; FATTY ACID; IDENTIFICATION METHOD; MICROBIAL COMMUNITY; ROOT SYSTEM;

AGRICULTURE; ARTICLE; CULTIVAR; INTERMETHOD COMPARISON; LETTUCE; MICROFLORA; NONHUMAN; PEPPER; PLANT GROWTH; PLANT ROOT; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; TECHNIQUE; TOMATO;

CAPSICUM; CAPSICUM ANNUM; CAPSICUM ANNUUM VAR. ANNUUM; GITANA; LACTUCA; LACTUCA SATIVA; LYCOPERSICON ESCULENTUM;

EID: 0034888101     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/w01-011     Document Type: Article

References (27)

1. Effect of metal-rich sludge amendments on the soil microbial community
2. The rhizosphere: The hidden half of the hidden half
3. Microbial community structure and function in the spermosphere as affected by soil and seed type
4. Microbial distribution in soil: New techniques
5. Microbial biomass measured as total lipid phosphate in soils of different organic content
6. Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals
7. Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysis
8. Patterns of potential C source utilization by rhizosphere communities
9. Analytical approaches to the characterization of samples of microbial communities using patterns of potential C source utilization
10. Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization
11. Dilution/extinction of community phenotypic characters to estimate relative structural diversity in mixed communities
12. Functional biodiversity of microbial communities in the rhizosphere of hybrid larch (Larix eurolepis) and Sitka spruce (Picea sitchensis)
13. Selective influence of plant species on microbial diversity in the rhizosphere
14. Phospholipid fatty acid profiles and carbon utilization patterns for analysis of microbial community structure under field and greenhouse conditions
15. Fatty acid methyl ester (FAME) profiles as a tool to investigate community structure of two agricultural soils
16. Evaluation of plant growth promoting rhizobacteria for biological control of Pythium root rot of cucumbers grown in rockwool and effects on yield
17. Plant root exudates and their influence upon soil microorganisms
18. Hydroponics, a solution for zoosporic pathogens
19. Characterization of bacteria that suppress Rhizoctonia damping-off in bark compost media by analysis of fatty acid biomarkers
20. Potential danger for infection and spread of root disease of tomatoes in hydroponics
21. Plant growth responses to bacterization with selected Pseudomonas spp. strains and rhizosphere microbial development in hydroponic cultures
22. Lipid analysis in microbial ecology: Quantitative approaches to the study of microbial communities
23. Prospects for microbial stabilization in the hydroponic culture of tomato using circulating nutrient solution
24. Study of the microbial dynamics in the root environment of closed, hydroponic cultivation systems for tomato using phospholipid fatty acid profiles
25. Comparison of sole carbon source profiles monitored at two different wavelengths
26. Extraction and identification of phytotoxic substances accumulated in nutrient solution for the hydroponic culture of tomato