Comparisons of two methods for haplotype reconstruction and haplotype frequency estimation from population data [2]

American Journal of Human Genetics

Volumn 69, Issue 4, 2001, Pages 906-912

  Zhang, Shuanglin ^a   Pakstis, Andrew J ^a   Kidd, Kenneth K ^a   Zhao, Hongyu ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; GENE; GENOTYPE; HAPLOTYPE; HUMAN; LETTER; MAXIMUM LIKELIHOOD METHOD; POPULATION; POPULATION GENETICS; PRIORITY JOURNAL; SYSTEM ANALYSIS;

ALGORITHMS; ALLELES; BAYES THEOREM; CALPAIN; COMPUTER SIMULATION; GENE FREQUENCY; HAPLOTYPES; HETEROZYGOTE; HUMANS; LIKELIHOOD FUNCTIONS; REPRODUCIBILITY OF RESULTS; RESEARCH DESIGN; SENSITIVITY AND SPECIFICITY; SOFTWARE;

EID: 0034822101     PISSN: 00029297     EISSN: None     Source Type: Journal    
DOI: 10.1086/323622     Document Type: Letter

References (7)

1. L Excoffier M Slatkin Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population Mol Biol Evol 12 1995 921 927
2. M Hawley K Kidd Haplo: a program using the EM algorithm to estimate the frequencies of multi-site haplotypes J Hered 86 1995 409 411
3. JC Long RC Williams M Urbanek An E-M algorithm and testing strategy for multiple-locus haplotypes Am J Hum Genet 56 1995 799 810
4. MV Osier KH Cheung JR Kidd AJ Pakstis PL Miller KK Kidd ALFRED: an allele frequency database for diverse populations and DNA polymorphisms—an update Nucleic Acids Res 29 2001 317 319
5. M Stephens NJ Smith P Donnelly A new statistical method for haplotype reconstruction from population data Am J Hum Genet 68 2001 978 989
6. SA Tishkoff AJ Pakstis G Ruano KK Kidd The accuracy of statistical methods for estimation of haplotype frequencies: an example from the CD4 locus Am J Hum Genet 67 2000 518 522
7. X Xie J Ott Testing linkage disequilibrium between a disease gene and marker loci Am J Hum Genet Suppl 53 1993 1107