Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro

DNA Research

Volumn 7, Issue 2, 2000, Pages 143-150

  Nagase, Takahiro ^a   Kikuno, Reiko ^a   Ishikawa, Ken Ichi ^a   Hirosawa, Makoto ^a   Ohara, Osamu ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Brain; cDNA sequencing; Chromosomal location; Expression profile; In vitro transcription translation; Large proteins

Indexed keywords

RODENTIA;

COMPLEMENTARY DNA; PROTEIN;

ADULT; ARTICLE; BRAIN; DNA SEQUENCE; ENZYME LINKED IMMUNOSORBENT ASSAY; FETUS; GENE EXPRESSION PROFILING; GENOME; HUMAN; METABOLISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT;

ADULT; BRAIN; DNA, COMPLEMENTARY; ENZYME-LINKED IMMUNOSORBENT ASSAY; FETUS; GENE EXPRESSION PROFILING; GENOME, HUMAN; HUMANS; PROTEINS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

EID: 0034724504     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/7.2.143     Document Type: Article

References (16)

1. Dunham, I., Shimizu, N., Roe, B. A. et al. 1999, The DNA sequence of human chromosome 22, Nature, 402, 489-495.
2. Nomura, N., Miyajima, N., Sazuka, T. et al. 1994, Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1, DNA Res., 1, 27-35.
3. Nagase, T., Kikuno, R., Ishikawa, K.-I. et al. 2000, Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro, DNA Res., 7, 65-73.
4. Ohara, O., Nagase, T., Ishikawa, K.-I. et al. 1997, Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins, DNA Res., 4, 53-59.
5. Hirosawa, M., Nagase, T., Ishikawa, K.-I., Kikuno, R., Nomura, N., and Ohara, O. 1999, Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain, DNA Res., 6, 329-336.
6. Ishikawa, K.-I., Nagase, T., Nakajima, D. et al. 1997, Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro, DNA Res., 4, 307-313.
7. Nagase, T., Ishikawa, K.-I., Miyajima, N. et al. 1998, Prediction of the coding sequences of unidentified human genes. IX. 100 new cDNA clones from brain which can code for large proteins in vitro, DNA Res., 5, 31-39.
8. Gyapay, G., Schmitt, K., Fizames, C. et al. 1996, A radiation hybrid map of the human genome, Hum. Mol. Genet., 5, 339-346.
9. Bleasby, A. J., Akrigg, D., and Attwood, T. K. 1994, OWL - a non-redundant composite protein sequence database, Nucleic Acids Res., 22, 3574-3577.
10. Goffeau, A., Barrell, B. G., Bussey, H. et al. 1996, Life with 6000 genes, Science, 274, 546-567.
11. The C. elegans Sequencing Consortium. 1998, Genome sequence of the nematode, C. elegans: A platform for investing biology, Science, 282, 2012-2018.
12. Bateman, A., Birney, E., Durbin, R. et al. 1999, Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins, Nucleic Acids Res., 27, 260-262.
13. Kikuno, R., Nagase, T., Suyama, M., Waki, M., Hirosawa, M., and Ohara, O. 2000, HUGE: a database for human large proteins identified in Kazusa cDNA sequencing project, Nucleic Acids Res., 28, 331-332.
14. Nagase, T., Ishikawa, K.-I., Suyama, M. et al. 1998, Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro, DNA Res., 5, 277-286.
15. Deguchi, M., Hata, Y., Takeuchi, M. et al. 1998, BE-GAIN (brain-enriched guanylate kinase-associated protein), a novel neuronal PSD-95/SAP90-binding protein, J. Biol. Chem., 273, 26269-26272.
16. Taguchi, A., Wanaka, A., Mori, T. et al. 1996, Molecular cloning of novel leucine-rich repeat proteins and their expression in the developing mouse nervous system, Brain Res. Mol. Brain Res., 35, 31-40.