The role of nucleotide excision repair of Escherichia coli in repair of spontaneous and gamma-radiation-induced DNA damage in the lacZα gene

Mutation Research - DNA Repair

Volumn 460, Issue 2, 2000, Pages 117-125

  Kuipers, Gitta K ^a   Slotman, Ben J ^a   Poldervaart, Hester A ^a   van Vilsteren, Ingrid M J ^a   Reitsma Wijker, Carola A ^a   Lafleur, M Vincent M ^a  

^a VU UNIVERSITY AMSTERDAM   (Netherlands)

Author keywords

Fpg deficiency; lacZ gene; M13; Mutation spectrum; Nucleotide excision repair; Radiation

Indexed keywords

BUTYLCRESOL; DNA GLYCOSYLTRANSFERASE; SINGLE STRANDED DNA;

ARTICLE; BASE PAIRING; DNA DAMAGE; ESCHERICHIA COLI; EXCISION REPAIR; FRAMESHIFT MUTATION; GAMMA RADIATION; IONIZING RADIATION; NONHUMAN; PRIORITY JOURNAL; SPONTANEOUS MUTATION;

ADENOSINE TRIPHOSPHATASES; BACTERIAL PROTEINS; DNA DAMAGE; DNA MUTATIONAL ANALYSIS; DNA REPAIR; DNA, BACTERIAL; DNA-BINDING PROTEINS; DNA-FORMAMIDOPYRIMIDINE GLYCOSYLASE; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GAMMA RAYS; LAC OPERON; MUTATION; N-GLYCOSYL HYDROLASES; REACTIVE OXYGEN SPECIES; TRANSFORMATION, BACTERIAL;

EID: 0034713911     PISSN: 09218777     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0921-8777(00)00021-5     Document Type: Article

References (33)

1. Teebor G.W., Boorstein R.J., Cadet J. The repairability of oxidative free radical mediated damage to DNA: a review. Int. J. Radiat. Biol. 54:1988;131-150.
2. Boiteux S. Properties and biological functions of the NTH and FPG proteins of Escherichia coli: two DNA glycosylases that repair oxidative damage in DNA. J. Photochem. Photobiol. 19:1993;87-96.
3. Demple B., Harrison L. Repair of oxidative damage to DNA: enzymology and biology. Annu. Rev. Biochem. 63:1994;915-948.
4. Von Sonntag C. The Chemical Basis of Radiation Biology. 1987;Taylor and Francis, London.
5. Hutchinson F. Chemical changes induced in DNA by ionizing radiation. Progr. Nucleic Acids Res. Mol. Biol. 32:1985;115-154.
6. Chetsanga C.J., Lindahl T. Release of 7-methylguanine residues whose imidazole rings have been opened from damaged DNA by a DNA glycosylase from Escherichia coli. Nucleic Acids Res. 6:1979;3673-3684.
7. Tchou J., Kasai H., Shibutani S., Chung M.-H., Laval J., Grollman A.P., Nishimura S. 8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity. Proc. Natl. Acad. Sci. U. S. A. 88:1991;4690-4694.
8. Michaels M.L., Tchou J., Grollman A.P., Miller J.H. A repair system for 8-oxo-7,8-dihydrodeoxyguanine. Biochemistry. 31:1992;10964-10968.
9. Shibutani S., Takeshita M., Grollman A.P. Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8oxodG. Nature. 349:1991;431-434.
10. Cheng K.C., Cahill D.S., Kasai H., Nishimura S., Loeb L.A. 8-hydroxyguanine, an abundant form of oxidative DNA damage, causes G→T and A→C substitutions. J. Biol. Chem. 267:1992;166-172.
11. Wood M.L., Dizdaroglu M., Gajewski E., Essigmann J.M. Mechanistic studies of ionizing radiation and oxidative mutagenesis: genetic effects of a single 8-hydroxyguanine (7-hydro-8-oxoguanine) residue inserted at a unique site in a viral genome. Biochemistry. 29:1990;7024-7032.
12. Klein J.C., Bleeker M.J., Saris C.P., Roelen H.C.P.F., Brugghe H.F., van den Elst H., van der Marel G.A., van Boom J.H., Westra J.G., Kriek E., Berns A.J.M. Repair and replication of plasmids with site-specific 8-oxodG and 8-AAFdG residues in normal and repair-deficient human cells. Nucleic Acids Res. 20:1992;4437-4443.
13. Moriya M., Grollman A.P. Mutations in the mutY gene of Escherichia coli enhance the frequency of targeted G:C→T:A transversions induced by a single 8-oxoguanine residue in single-stranded DNA. Mol. Gen. Genet. 239:1993;72-76.
14. Moriya M. Single-stranded shuttle plasmid for mutagenesis studies in mammalian cells: 8-oxoguanine in DNA induces targeted G:C→T:A transversions in simian kidney cells. Proc. Natl. Acad. Sci. U. S. A. 90:1993;1122-1126.
15. Kuipers G.K., Poldervaart H.A., Slotman B.J., Lafleur M.V.M. The influence of formamido-pyrimidine-DNA glycosylase on the spontaneous and γ-radiation-induced mutation spectrum of the lacZα gene. Mutat. Res. 435:1999;141-150.
16. 6-methylguanine by ABC exinuclease of Escherichia coli in vitro. J. Biol. Chem. 264:1989;5172-5176.
17. Lin J.-J., Sancar A. A new mechanism for repairing oxidative DNA damage to DNA: (A)BC exinuclease removes AP sites and thymine glycols from DNA. Biochemistry. 28:1989;7979-7984.
18. Kow Y.W., Wallace S.S., van Houten B. UvrABC nuclease complex repairs thymine glycol, an oxidative DNA base damage. Mutat. Res. 235:1990;147-156.
19. Sancar A., Sancar G.B. DNA repair enzymes. Annu. Rev. Biochem. 57:1988;29-67.
20. vanHouten B. Nucleotide excision repair in Escherichia coli. Microbiol. Rev. 54:1990;18-51.
21. Nabben F.J., Lafleur M.V.M., Sikkers J.C.M., Loman A.C., Retèl J., Loman H. Repair of damage in double-stranded φX174 (RF) DNA due to radiation-induced water radicals. Int. J. Radiat. Biol. 45:1984;379-388.
22. 60Co γ-rays induce predominantly C/G to G/C transversions in double-stranded M13 DNA. Nucleic Acids Res. 16:1988;8147-8156.
23. Maniatis T., Fritsch E.F., Sambrook J. Molecular Cloning: A Laboratory Manual. 1982;Coldspring Harbor Laboratory Press, Cold Spring Harbor, NY.
24. Sanger F., Nicklen S., Coulson A.R. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. U. S. A. 74:1977;5463-5467.
25. Sancar A., Tang M.S. Nucleotide excision repair. Photochem. Photobiol. 57:1993;905-921.
26. Braun J.E.F., Wanamarta A.H., Westmijze E.J., Wientjes N.M., Wijker C.A., Lafleur M.V.M., Retèl J. Influence of nucleotide excision repair of Escherichia coli on radiation-induced mutagenesis of double-stranded M13 DNA. Mutat. Res. 384:1997;45-53.
27. Murata-Kamiya N., Kaji H., Kasai H. Deficient nucleotide excision repair increases base pair substitutions but decreases TGGC frameshifts induced by methylglyoxal in Escherichia coli. Mutat. Res. 442:1999;19-28.
28. 2. Nucleic Acids Res. 16:1988;7703-7711.
29. Cohen-Fix O., Livneh Z. Biochemical analysis of UV mutagenesis in Escherichia coli by using a cell-free reaction coupled to a bioassay: identification of a DNA repair-dependent, replication-independent pathway. Proc. Natl. Acad. Sci. U. S. A. 89:1992;3300-3304.
30. Cohen-Fix O., Livneh Z. In vitro UV mutagenesis associated with nucleotide excision-repair gaps in Escherichia coli. J. Biol. Chem. 269:1994;4953-4958.
31. de Jong J., Loman H., Blok Joh. Host-cell reactivation of φX174 RF-DNA damaged by γ-ray-induced phenylalanine and water-radicals. Int. J. Radiat. Biol. 22:1972;579-587.
32. Tudek B., Laval J., Boiteux S. SOS-independent mutagenesis in lacZ induced by methylene blue plus visible light. Mol. Gen. Genet. 236:1993;433-439.
33. Blaisdell J.O. A novel role for Escherichia coli endonuclease VIII in prevention of spontaneous G→T transversions. J. Bacteriol. 181:1999;6396-6402.