Characterization of JDP genes, an evolutionarily conserved J domain-only protein family, from human and moths

Biochimica et Biophysica Acta - Gene Structure and Expression

Volumn 1491, Issue 1-3, 2000, Pages 355-363

  Lee, Jieun ^a   Hahn, Yoonsoo ^a   Yun, Ji Hye ^a   Mita, Kazuei ^b   Chung, Jae Hoon ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

^b NATIONAL INSTITUTE OF RADIOLOGICAL SCIENCES   (Japan)

Author keywords

Bombyx mori; Human; J domain protein; Manduca sexta; Phylogenetic analysis

Indexed keywords

CHAPERONE; HEAT SHOCK PROTEIN 40; HEAT SHOCK PROTEIN 70;

AMINO ACID SEQUENCE; CHROMOSOMAL LOCALIZATION; CHROMOSOME 10; CONTROLLED STUDY; DROSOPHILA; GENE EXPRESSION; HUMAN; LEPIDOPTERA; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYADENYLATION; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN PROCESSING; SHORT SURVEY; SILKWORM; SOUTHERN BLOTTING; TISSUE DISTRIBUTION;

BOMBYX MORI; LEPIDOPTERA; MANDUCA SEXTA;

EID: 0034712787     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-4781(00)00047-6     Document Type: Article

References (34)

1. Bukau B., Horwich A.L. The Hsp70 and Hsp60 chaperone machines. Cell. 92:1998;351-366.
2. Rudiger S., Buchberger A., Bukau B. Interaction of Hsp70 chaperones with substrates. Nat. Struct. Biol. 4:1997;342-349.
3. Mayer M.P., Bukau B. Hsp70 chaperone systems: diversity of cellular functions and mechanism of action. Biol. Chem. 379:1998;261-268.
4. Caplan A.J., Douglas M.G. Characterization of YDJ1: a yeast homologue of the bacterial dnaJ protein. J. Cell Biol. 114:1991;609-621.
5. Rowley N., Prip-Buus C., Westermann B., Brown C., Schwarz E., Barrell B., Neupert W. Mdj1p, a novel chaperone of the DnaJ family, is involved in mitochondrial biogenesis and protein folding. Cell. 77:1994;249-259.
6. Ohtsuka K. Cloning of a cDNA for heat-shock protein hsp40, a human homologue of bacterial DnaJ. Biochem. Biophys. Res. Commun. 197:1993;235-240.
7. Blumberg H., Silver P.A. A homologue of the bacterial heat-shock gene DnaJ that alters protein sorting in yeast. Nature. 349:1991;627-630.
8. Raabe T., Manley J.L. A human homologue of the Escherichia coli DnaJ heat-shock protein. Nucleic Acids Res. 19:1991;6645.
9. Kanazawa M., Terada K., Kato S., Mori M. HSDJ, a human homolog of DnaJ, is farnesylated and is involved in protein import into mitochondria. J. Biochem. 121:1997;890-895.
10. Andres D.A., Shao H., Crick D.C., Finlin B.S. Expression cloning of a novel farnesylated protein, RDJ2, encoding a DnaJ protein homologue. Arch. Biochem. Biophys. 346:1996;113-124.
11. Kelley W.L., Georgopoulos C. The T/t common exon of simian virus 40, JC, and BK polyomavirus T antigens can functionally replace the J-domain of the Escherichia coli DnaJ molecular chaperone. Proc. Natl. Acad. Sci. USA. 94:1997;3679-3684.
12. Buchner E., Gundersen C.B. The DnaJ-like cysteine string protein and exocytotic neurotransmitter release. Trends Neurosci. 20:1997;223-227.
13. Sadler I., Chiang A., Kurihara T., Rothblatt J., Way J., Silver P. A yeast gene important for protein assembly into the endoplasmic reticulum and the nucleus has homology to DnaJ, an Escherichia coli heat shock protein. J. Cell Biol. 109:1989;2665-2675.
14. Zhang S., Lockshin C., Herbert A., Winter E., Rich A. Zuotin, a putative Z-DNA binding protein in Saccharomyces cerevisiae. EMBO J. 11:1992;3787-3796.
15. Ungewickell E., Ungewickell H., Holstein S.E., Lindner R., Prasad K., Barouch W., Martin B., Greene L.E., Eisenberg E. Role of auxilin in uncoating clathrin-coated vesicles. Nature. 378:1995;632-635.
16. Syken J., De-Medina T., Munger K. TID1, a human homolog of the Drosophila tumor suppressor l(2)tid, encodes two mitochondrial modulators of apoptosis with opposing functions. Proc. Natl. Acad. Sci. USA. 96:1999;8499-8504.
17. Pellecchia M., Szyperski T., Wall D., Georgopoulos C., Wuthrich K. NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone. J. Mol. Biol. 260:1996;236-250.
18. Huang K., Flanagan J.M., Prestegard J.H. The influence of C-terminal extension on the structure of the 'J-domain' in E. coli DnaJ. Protein Sci. 8:1999;203-214.
19. Qian Y.Q., Patel D., Hartl F.U., McColl D.J. Nuclear magnetic resonance solution structure of the human Hsp40 (HDJ-1) J-domain. J. Mol. Biol. 260:1996;224-235.
20. Kelley W.L. The J-domain family and the recruitment of chaperone power. Trends Biochem. Sci. 23:1998;R222-R227.
21. Kelly W.L. Molecular chaperones: how J domains turn on Hsp70s. Curr. Biol. 9:1999;305-308.
22. Hahn Y., Lee J., Seong C., Yoon J., Chung J.H. Structural analysis of phylogenetically conserved J domain protein gene. Biochim. Biophys. Acta. 1447:1999;325-333.
23. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:1997;3389-3402.
24. Huang X. A contig assembly program based on sensitive detection of fragment overlaps. Genomics. 14:1992;18-25.
25. Mita K., Morimyo M., Okano K., Shimada T., Maeda S. The construction of EST database for genome analysis of Bombyx mori. RIKEN Rev. 22:1999;63-67.
26. H.M. Robertson, R. Martos, C.R. Sears, E.Z. Todres, K.K.O. Walden, J.B. Nardi, Diversity of odorant binding proteins revealed by an expressed sequence tag project on male Manduca sexta moth antennae, Insect Mol. Biol., in press.
27. Church G.M., Gilbert W. Genomic sequencing. Proc. Natl. Acad. Sci. USA. 81:1984;1991-1995.
28. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
29. Bateman A., Birney E., Durbin R., Eddy S.R., Finn R.D., Sonnhammer E.L.L. Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins. Nucleic Acids Res. 27:1999;260-262.
30. Pearson W.R., Lipman D.J. Improved tools for biological sequence analysis. Proc. Natl. Acad. Sci. USA. 85:1988;2444-2448.
31. Aguinaldo A.M.A., Turbeville J.M., Linford L.S., Rivera M.C., Garey J.R., Raff R.A., Lake J.A. Evidence for a clade of nematodes, arthropods and other moulting animals. Nature. 387:1997;489-493.
32. Olson M., Hood L., Cantor C., Botstein D. A common language for physical mapping of the human genome. Science. 245:1989;1434-1435.
33. Deloukas P., Schuler G.D., Gyapay G., Beasley E.M., Soderlund C., Rodriguez-Tome P., Hui L., Matise T.C., McKusick K.B., Beckmann J.S., et al. A physical map of 30,000 human genes. Science. 282:1998;744-746.
34. Blake J.A., Richardson J.E., Davisson M.T., Eppig J.T. The Mouse Genome Database (MGD): genetic and genomic information about the laboratory mouse. The Mouse Genome Database Group. Nucleic Acids Res. 27:1999;95-98.