Phylogenetic relationships of the Japanese minnows, Pseudorasbora (Cyprinidae), as inferred from mitochondrial 16S rRNA gene sequences

Ichthyological Research

Volumn 47, Issue 1, 2000, Pages 43-50

  Watanabe, Katsutoshi ^a,c   Iguchi, Kei'ichiroh ^b   Hosoya, Kazumi ^b   Nishida, Mutsumi ^a,c  

^a FUKUI PREFECTURAL UNIVERSITY   (Japan)

^b FISHERIES RESEARCH AGENCY   (Japan)

^c UNIVERSITY OF TOKYO   (Japan)

Author keywords

16S rRNA; Cyprinidae; Mitochondrial DNA; Molecular phytogeny; Pseudorasbora

Indexed keywords

CYPRINIDAE; CYPRINIFORMES; PISCES; PSEUDORASBORA; PSEUDORASBORA PARVA; PSEUDORASBORA PUMILA; PUNGTUNGIA HERZI;

EID: 0034711892     PISSN: 13418998     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02674312     Document Type: Article

References (29)

1. Bargelloni, L., P. A. Ritchie, T. Patarnello, B. Battaglia, D. M. Lambert and A. Meyer. 1994. Molecular evolution at subzero temperatures: mitochondrial and nuclear phylogenies of fishes from Antarctica (Suborder Notothenioidei), and the evolution of antifreeze glycopeptides. Mol. Biol. Evol., 11: 854-863.
2. Cheng, Q. and B. Zheng, eds. 1987. Systematic synopsis of Chinese fishes. Science Press, Beijing. 1458 pp. (In Chinese.)
3. Goldman, N. 1993. Statistical tests of models of DNA substitution. J. Mol. Evol., 22: 182-198.
4. Environmental Agency of Japan. 1991. Threatened species of Japan - Red Data Book, Vertebrates. Japan Wildlife Research Center, Tokyo. 331 pp. (In Japanese.)
5. Eschmeyer, W. N. et al. 1998. Catalog of fishes. Special publication No. 1, Center for Biodiversity Research and Information, California Academy of Sciences, San Francisco. 2905 pp.
6. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
7. Hasegawa, M., H. Kishino, and T. Yano. 1985. Dating the human-ape split by a molecular clock of mitochondrial DNA. J. Mol. Evol., 22: 160-174.
8. Hosoya, K. 1993. Cyprinidae and Cobitidae. Pages 212-235 and 1258-1261 in T. Nakabo, ed. Fishes of Japan with pictorial keys to the species. Tokai Univ. Press, Tokyo. (In Japanese.)
9. Kawamura, K. and K. Hosoya. 1997. Discovery of an endangered cyprinid, Pseudorasbora pumila subsp. sensu Nakamura (1969), from the Miya River system, Mie. Japan. J. Ichthyol., 44: 57-60. (In Japanese with English abstract.)
10. Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol., 16: 111-120.
11. Kishino, H. and M. Hasegawa. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea. J. Mol. Evol., 29: 170-179.
12. Kitaura, J., K. Wada and M. Nishida. 1998. Molecular phylogeny and evolution of unique mud-using territorial behavior in ocypodid crabs (Crustacea: Brachyura: Ocypodidae). Mol. Biol. Evol., 15: 626-637.
13. Kumar, S., K. Tamura and M. Nei. 1993. MEGA: Molecular evolutionary genetics analysis, version 1.01. The Pennsylvania State University, University Park. 130 pp.
14. Lu, Y.-L, P.-Q. Luo and Y.-Y. Chen. 1977. Gobioninae. Pages 439-549 in X. Wu, ed. The cyprinid fishes of China, Volume 2. Science Press, Peking. (In Chinese.)
15. Meyer, A., Biermann, C. H. and G. Orti. 1993. The phylogenetic position of the zebrafish (Danio rerio), a model system in developmental biology: an invitation to the comparative method. Proc. R. Soc. Lond. B, 252: 231-236.
16. Miya, M. and M. Nishida. 1996. Molecular phylogenetic perspective on the evolution of the deep-sea fish genus Cyclothone (Stomiiformes: Gonostomatidae). Ichthyol. Res., 43: 375-398.
17. Miya, M. and M. Nishida. 1998. Molecular phylogeny and evolution of the deep-sea fish genus Sternoptyx. Mol. Phylogenet. Evol., 10: 11-22.
18. Moritz, C. 1994. Defining evolutionarily significant units for conservation. Trends in Ecology and Evolution, 9: 373-375.
19. Nakamura, M. 1963, Keys to the freshwater fishes of Japan fully illustrated in colors. Hokuryukan, Tokyo. 258 pp. (In Japanese.)
20. Nakamura, M. 1969. Nippon no koi-ka gyorui (Cyprinid fishes of Japan). Research Institute of Natural Resources, Tokyo. 455 pp. (In Japanese.)
21. Nishimura, S. 1980. Nihon-kai no seiritsu (Formation of the Sea of Japan), 2nd ed. Tsukiji-Shokan, Tokyo. 230 pp. (In Japanese.)
22. Page, R. D. M. and E. C. Holmes. 1998. Molecular Evolution: a phylogenetic approach. Blackwell Science, Oxford, v+346 pp.
23. Simons, A. M. and R. L. Mayden. 1998. Phylogenetic relationships of the Western North American phoxinins (Actinopterygii: Cyprinidae) as inferred from mitochondrial 12S and 16S ribosomal RNA sequences. Mol. Phylogenet. Evol., 9: 308-329.
24. Swofford, D. L. 1999. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
25. Tatsukawa, K. 1989. Ctenopharyngodon and Hypophthalmichthys. Pages 282-293 in H. Kawanabe and N. Mizuno, eds. Nippon no tansuigyo (Japanese freshwater fishes). Yama-Kei Publ., Tokyo. (In Japanese.)
26. Templeton, A. R. 1983. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and apes. Evolution, 37: 221-244.
27. Uchiyama, R. 1987. Morphology and ecology of Pseudorasbora pumila subsp. Tansuigyo, 13: 74-84. (In Japanese.)
28. Uchiyama, R. 1989. Pseudorasbora. Pages 302-309 in H. Kawanabe and N. Mizuno, eds. Nippon no tansuigyo (Japanese freshwater fishes). Yama-Kei Publ., Tokyo. (In Japanese.)
29. Watanabe, K. 1998. Parsimony analysis of the distribution pattern of Japanese primary freshwater fishes, and its application to the distribution of the bagrid catfishes. Ichthyol. Res., 45: 259-270.