In vitro binding of nucleolin to double-stranded telomeric DNA

Biochemical and Biophysical Research Communications

Volumn 268, Issue 3, 2000, Pages 909-915

  Pollice, Alessandra ^a,b   Zibella, Maria Pia ^a   Bilaud, Thomas ^d   Laroche, Thierry ^c   Pulitzer, John F ^a,b   Gilson, Eric ^d  

^a UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^b INSTITUTE OF GENETICS AND BIOPHYSICS ADRIANO BUZZATI TRAVERSO   (Italy)

^c SWISS INST FOR EXP CANCER RESEARCH   (Switzerland)

^d Univ Claude Bernard   (France)

Author keywords

DNA binding; Mammalian; Nucleolin; Telomere

Indexed keywords

DOUBLE STRANDED DNA; NUCLEOLIN; POLYCLONAL ANTIBODY;

ARTICLE; CELL NUCLEUS; HELA CELL; HUMAN; HUMAN CELL; MOUSE; NONHUMAN; NUCLEIC ACID ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DNA BINDING; PROTEIN PURIFICATION; TELOMERE;

MAMMALIA;

EID: 0034708249     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1006/bbrc.2000.2237     Document Type: Article

References (41)

1. Zakian V. A. Telomeres: Beginning to understand the end. Science. 270:1995;1601-1607.
2. Olovnikov A. M. A theory of marginotomy. J. Theor. Biol. 41:1973;181-190.
3. Blackburn E. H., Greider C. W. Telomeres 1. 1995;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
4. de Lange T., DePinho R. A. Unlimited mileage from telomerase. Science. 283:1999;947-949.
5. Mc Clintock B. The stability of broken ends of chromosomes in Zea mays. Genetics. 26:1941;234-282.
6. Sandell L. L., Zakian V. A. Loss of a yeast telomere: Arrest, recovery, and chromosome loss. Cell. 75:1993;729-739.
7. van Steensel B., Smogorzewska A., de Lange T. TRF2 protects human telomeres from end-to-end fusions. Cell. 92:1998;401-413.
8. Bilaud T., Koering C. E., Binet-Brasselet E., Ancelin K., Pollice A., Gasser S. M., Gilson E. The telobox, a Myb-related telomeric DNA binding motif found in proteins from yeast, plants and human. Nucleic Acids Res. 24:1996;1294-1303.
9. Bilaud T., Brun C., Ancelin K., Koering C. E., Laroche T., Gilson E. Telomeric localization of TRF2, a novel human telobox protein. Nature Genet. 17:1997;236-239.
10. Gasser S. M., Laroche T., Falquet J., Boy de la Tour E., Laemmli U. K. Metaphase chromosome structure - Involvement of topoisomerase II. J. Mol. Biol. 188:1986;613-629.
11. Gilson E., Roberge M., Giraldo R., Rhodes D., Gasser S. M. Distortion of the DNA double helix by RAP1 at silencers and multiple telomeric binding sites. J. Mol. Biol. 231:1993;293-310.
12. Miskimins W. K., Roberts M. P., McClelland A., Ruddle F. H. Use of protein-blotting procedure and a specific DNA probe to identify nuclear proteins that recognize the promoter region of the transferrin receptor gene. Proc. Natl. Acad. Sci. USA. 82:1985;6741-6744.
13. von Kries J. P., Buhrmester H., Stratling W. H. A matrix/scaffold attachment region binding protein: Identification, purification, and mode of binding. Cell. 64:1991;123-135.
14. Moyzis R. K., Buckingham J. M., Cram L. S., Dani M., Deaven L. L., Jones M. D., Meyne J., Ratliff R. L., Wu J. R. A highly conserved repetitive DNA sequence, (TTAGGG)n′ present at the telomeres of human chromosomes. Proc. Natl. Acad. Sci. USA. 85:1988;6622-6626.
15. Wellinger R. J. n, Zakian V. A. Lack of positional requirements for autonomously replicating sequence elements on artificial yeast chromosomes. Proc. Natl. Acad. Sci. USA. 86:1989;973-977.
16. Shore D., Nashmyth K. Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements. Cell. 51:1987;727-732.
17. Pollice A., Ciaramella M., Pulitzer J. F. Saccharomyces cerevisiae multifunctional protein RAP1 binds to a conserved sequence in the Polyoma virus enhancer and is responsible for its transcriptional activity in yeast cells. FEBS Lett. 323:1993;77-82.
18. Yang T. H., Tsai W. H., Lee Y. M., Lei H. Y., Lai M. Y., Chen D. S., Yeh N. H., Lee S. C. Purification and characterization of nucleolin and its identification as transcriptional repressor. Mol. Cell. Biol. 14:1994;6068-6074.
19. Srivastava M., Fleming P. J., Pollard H. B., Burns A. L. Cloning and sequencing of the human nucleolin cDNA. FEBS Lett. 250:1989;99-105.
20. Zakian V. A. Structure and function of telomeres. Annu. Rev. Genet. 23:1989;579-604.
21. Hernandez-Verdun D., Gautier T. The chromosome periphery during mitosis. BioEssays. 16:1994;179-185.
22. Schwab M. S., Gossweiler U., Dreyer C. Subcellular distribution of distinct nucleolin subfractions recognized by two monoclonal antibodies. Exp. Cell Res. 239:1998;226-234.
23. Serin G., Joseph G., Ghisolfi L., Bauzan M., Erard M., Amalric F., Bouvet P. Two RNA-binding domains determine the RNA-binding specificity of nucleolin. J. Biol. Chem. 272:1997;13109-13116.
24. Ishikawa, Matunis M. J., Dreyfuss G., Cech T. R. Nuclear proteins that bind the pre-mRNA 3′ splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n. Mol. Cell Biol. 13:1993;4301-4310.
25. Dickinson L. A., Kohwi-Shigematsu T. Nucleolin is a matrix attachment region DNA-binding protein that specifically recognizes a region with high base-unpairing potential. Mol. Cell. Biol. 15:1995;456-465.
26. Tuteja N., Huang N. W., Skopac D., Tuteja R., Hrvatic S., Zhang J., Pongor S., Joseph G., Faucher C., Amalric F. Human DNA helicase IV is nucleolin, an RNA helicase modulated by phosphorylation. Gene. 160:1995;143-148.
27. Dempsey L. A., Hanakahi L. A., Maizels N. A specific isoform of hnRNP D interacts with DNA in the LR1 heterodimer: Canonical RNA binding motifs in a sequence-specific duplex DNA binding protein. J. Biol. Chem. 273:1998;29224-29229.
28. Dempsey L. A., Sun H., Hanakahi L. A., Maizels N. G4 DNA binding by LR1 and its subunits, nucleolin and hnRNP D, a role for G-G pairing in immunoglobulin switch recombination. J. Biol. Chem. 274:1999;1066-1071.
29. Zuckerkandl E., Villet R. Generation of high specificity through low-specificity binding of proteins to DNA. FEBS Lett. 231:1988;291-298.
30. Gilson E., Müller T., Sogo J., Laroche T., Gasser S. M. RAP1 stimulates single- to double-strand association of yeast telomeric DNA: Implications for telomere-telomere interactions. Nucleic Acids Res. 22:1994;5310-5320.
31. Giraldo R., Rhodes D. The yeast telomere-binding protein RAP1 binds to and promotes the formation of DNA quadruplexes in telomeric DNA. EMBO J. 13:1994;2411-2420.
32. Eid J. E., Sollner-Webb B. ST-1, a 39 KDa protein in Trypanosoma brucei, exhibits a dual affinity for the duplex form of the 29-base-pair subtelomeric repeat and its C-rich strand. Mol. Cell. Biol. 15:1995;389-397.
33. Broccoli D., Smogorzewska A., Chong L., de Lange T. Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2. Nat. Genet. 17:1997;231-235.
34. Vassetzky N. S., Gaden F., Brun C., Gasser S. M., Gilson E. Tap1p and Teb1p, two telobox proteins in Schizosaccharomyces pombe, recognize different telomeric-related DNA sequences. Nucleic Acids Res. 27:1999;4687-4694.
35. Zentgraf U. Telomere-binding proteins of A. thaliana. Plant Mol. Biol. 27:1995;467-475.
36. Rawlins D. J., Highett M. I., Shaw P. J. Localization of telomeres in plant interphase nuclei by in situ hybridization and 3D confocal microscopy. Chromosoma. 100:1991;424-431.
37. Strivastava A. K., Schlessinger D. Structure and organization of ribosomal DNA. Biochimie. 73:1991;631-638.
38. Scherthan H., Bähler J., Kohli J. Dynamics of chromosome organization and pairing during meiotic prophase in fission yeast. J. Cell Biol. 127:1994;273-285.
39. Gotta M., Strahl-Bolsinger S., Renauld H., Laroche T., Kennedy B. K., Grunstein M., Gasser S. M. Localization of Sir2p: The nucleolus as a compartment for silent information regulators. EMBO J. 16:1997;3243-3255.
40. Kennedy B. K., Gotta M., Sinclair D. A., Mills K., McNabb D. S., Murthy M., Pak S. M., Laroche T., Gasser S. M., Guarente L. Redistribution of silencing protein from telomeres to the nucleolus is associated with extension in life span in S. cerevisiae. Cell. 89:1997;381-391.
41. Pederson T. The plurifunctional nucleolus. Nucleic Acids Res. 26:1998;3871-3876.