Solution structure of Eps15's third EH domain reveals coincident Phe-Trp and Asn-Pro-Phe binding sites

Biochemistry

Volumn 39, Issue 15, 2000, Pages 4309-4319

  Enmon, Jennifer L ^a   De Beer, Tonny ^b   Overduin, Michael ^b  

^a UNIVERSITY OF COLORADO   (United States)

^b UNIVERSITY OF COLORADO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; ASPARAGINE; CALCIUM ION; CARBON 13; NITROGEN 15; PHENYLALANINE; PROLINE;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; BINDING SITE; ENDOCYTOSIS; ESCHERICHIA COLI; MUTAGENESIS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; POINT MUTATION; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; SIGNAL TRANSDUCTION;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BINDING SITES; CALCIUM; CALCIUM-BINDING PROTEINS; EF HAND MOTIFS; HUMANS; INTRACELLULAR SIGNALING PEPTIDES AND PROTEINS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTATION; NERVE TISSUE PROTEINS; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PHOSPHOPROTEINS; PHOSPHORIC MONOESTER HYDROLASES; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RAB GTP-BINDING PROTEINS; RECEPTOR, IGF TYPE 2; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SUBSTRATE SPECIFICITY; SURFACE PLASMON RESONANCE; THERMODYNAMICS;

ESCHERICHIA COLI;

EID: 0034681932     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9927383     Document Type: Article

References (58)

1. Santolini, E., Salcini, A. E., Kay, B. K., Yamabhai, M., and Di Fiore, P. P. (1999) Exp. Cell Res. 253, 186-209.
2. Salcini, A. E., Confalonieri, S., Doria, M., Santolini, E., Minenkova, O., Pelicci, P. G., and Di Fiore, P. P. (1997) Genes Dev. 11, 2239-2249.
3. Paoluzi, S., Castagnoli, L., Lauro, I., Salcini, A. E., Coda, L., Fre, S., Confalonieri, S., Pelicci, P. G., Di Fiore, P. P., and Cesareni, G. (1998) EMBO J. 17, 6541-6550.
4. Kohtz, D. S., and Puszkin, S. (1998) J. Biol. Chem. 263, 2144-2155.
5. Haffner, C., Takei, K., Chen, H., Ringstad, N., Hudson, A., Butler, M. H., Salcini, A. E., Di Fiore, P. P., and De Camilli, P. (1997) FEBS Lett. 419, 175-180.
6. Chen, H., Fre, S., Slepnev, V. I., Capua, M. R., Takei, K., Butler, M. H., Di Fiore, P. P., and De Camilli, P. (1998) Nature 394, 793-797.
7. Schweizer, A., Kornfeld, S., and Rohrer, J. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 14471-14476.
8. Johnson, K., Chan, W., and Kornfeld, S. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 10010-10014.
9. de Beer, T., Carter, R. E., Lobel-Rice, K. E., Sorkin, A., and Overduin, M. (1998) Science 281, 1357-1360.
10. Di Fiore, P. P., Peliccini, P. G., and Sorkin, A. (1997) Trends Biochem. Sci. 22, 411-413.
11. Tebar, F., Confalonieri, S., Carter, R. E., Di Fiore, P. P., and Sorkin, A. (1997) J. Biol. Chem. 272, 15413-15418.
12. Wong, W. T., Schumacher, C., Salcini, A. E., Romano, A., Castagnino, P., Pelicci, P. G., and Di Fiore, P. P. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9530-9534.
13. Yamabhai, M., Hoffman, N. G., Hardison, N. L., McPherson, P. S., Castagnoli, L., Cesareni, G., and Kay, B. K. (1998) J. Biol. Chem. 273, 21401-31407.
14. Page, L. J., Sowerby, P. J., Lui, W. W. Y., and Robinson, M. S. (1999) J. Cell Biol. 146, 993-1004.
15. Mintz, L., Galperin, E., Pasmanik-Chor, M., Tulzinsky, S., Bromberg, Y., Kozak, C. A., Joyner, A., Fein, A., and Horowitz, M. (1999) Genomics 59, 66-76.
16. Benmerah, A., Gagnon, J., Bègue, B., Mégarbané, B., Dautry-Varsat, A., and Cerf-Bensussan, N. (1995) J. Cell Biol. 131, 1831-1838.
17. Benmerah, A., Bègue, B., Dautry-Varsat, A., and Cerf-Bensussan, N. (1996) J. Biol. Chem. 271, 12111-12116.
18. van Delft, S., Schumacher, C., Hage, W., Verkleij, A. J., and van Bergen en Henegouwen, P. M. P. (1997) J. Cell Biol. 136, 811-821.
19. Iannolo, G., Salcini, A. E., Gaidarov, I., Goodman, O. B., Jr., Baulida, J., Carpenter, G., Pelicci, P. G., Di Fiore, P. P., and Keen, J. H. (1997) Cancer Res. 57, 240-245.
20. Sengar, A. S., Wang, W., Bishay, J., Cohen, S., and Egan, S. E. (1999) EMBO J. 18, 1159-1171.
21. Coda, L., Salcini, A. E., Confalonieri, S., Pelicci, G., Sorkina, T., Sorkin, A., Pelicci, P. G., and Di Fiore, P. P. (1998) J. Biol. Chem. 273, 3003-3012.
22. Whitehead, B., Tessari, M., Carotenuto, A., van Bergen en Henegouwen, P. M. P., and Vuister, G. W. (1999) Biochemistry 38, 11271-11277.
23. Strynadka, N. C. J., and James, M. N. G. (1989) Annu. Rev. Biochem. 58, 951-98,
24. Fin, B. E., Evenäs, J., Drakenberg, T., Waltho, J. P., Thulin, E., and Forsén, S. (1995) Nat. Struct. Biol. 2, 777-783.
25. Strynadka, N. C. J., Cherney, M., Sielecki, A. R., Li, M. X., Smillie, L. B., and James, M. N. G. (1997) J. Mol. Biol. 273, 238-255.
26. Skelton, N. J., Kordel, J., and Chazin, W. J. (1995) J. Mol. Biol. 249, 441-462.
27. Altieri, A. S., Hinton, D. P., and Byrd, R. A. (1995) J. Am. Chem. Soc. 117, 7566-7567.
28. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfiefer, J., and Bax, A. (1995) J. Biomol. NMR 6, 277-293.
29. Garret, D. S., Powers, R., Gronenborn, A. M., and Clore, G. M. (1991) J. Magn. Reson. 95, 214-220.
30. Enmon, J. L., de Beer, T., and Overduin, M. (2000) J. Biomol. NMR 16, 81-82.
31. Grzesiek, S., Anglister, J., and Bax, A. (1993) J. Magn. Reson. B 101, 114-119.
32. Kay, L. E., Xu, G. Y., Singer, A. U., Muhandiram, D. R., and Forman-Kay, J. D. (1993) J. Magn. Reson. B 101, 333-337.
33. Muhandiram, D. R., and Kay, L. E. (1994) J. Magn. Reson. B 103, 203-216.
34. Yamazaki, T., Forman-Kay, J. D., and Kay, L. E. (1993) J. Am. Chem. Soc. 115, 11054-11055.
35. Vuister, G. W., and Bax, A. (1993) J. Am. Chem. Soc. 115, 7772-7777.
36. Kay, L. E., and Bax, A. (1990) J. Magn. Reson. 86, 110-126.
37. Wishart, D. S., and Sykes, B. D. (1994) J. Biomol. NMR 4, 171-180.
38. Marion, D., Driscoll, P. C., Kay, L. E., Windfield, P. T., Bax, A., Gronenborn, A. M., and Clore, G. M. (1989) Biochemistry 28, 6150-6156.
39. Fesik, S. W., and Zuiderweg, E. R. P. (1988) J. Magn. Reson. 78, 588-593.
40. Vuister, G. W., Clore, M. G., Gronenborn, A. M., Powers, R., Garret, D. S., Tschudin, R., and Bax, A. (1993) J. Magn. Reson. B 101, 210-213.
41. Pascal, S. M., Muhandiram, T., Yamazaki, T., Forman-Kay, J. D., and Kay, L. E. (1994) J. Magn. Reson. B 103, 197-201.
42. Fletcher, C. M., Jones, D. N. M. Diamond, R., and Neuhaus, D. (1996) J. Biomol. NMR 8, 292-310.
43. Chattopadhyaya, R., Meador, W. E., Means, A. R., and Quiocho, F. A. (1992) J. Mol. Biol. 228, 1177-1192.
44. Declercq, J. P., Tinant, B., Parello, J., and Rambaud, J. (1991) J. Mol. Biol. 220, 1017-1039.
45. Svensson, L. A., Thulin, E., and Forsén, S. (1992) J. Mol. Biol. 223, 601-606.
46. Brunger, A. T. (1992) X-PLOR, Version 3.1, A System for X-ray Crystallography and NMR, Yale University Press, New Haven, CT.
47. Laskowski, R. A., Rullman, J. A. C., MacArthur, R., Kaptein, J. M., and Thorton, J. (1996) J. Biomol. NMR 8, 477-486.
48. Frenkiel, T., Bauer, C., Carr, M. D., Birdsall, B., and Freeney, J. (1990) J. Magn. Reson. 93, 420-425.
49. Bodenhausen, G., and Ruben, D. J. (1980) Chem. Phys. Lett. 69, 185-189.
50. Kay, L. E., Keifer, P., and Saarinen, T. (1992) J. Am. Chem. Soc. 114, 10663-10665.
51. Drake, S. K., Lee, K. L., and Falke, J. L. (1996) Biochemistry 35, 6697-6705.
52. Andersson, M., Malmendal, A., Linse, S., Ivarsson, I., Forsén, S., and Svensson, L. A. (1997) Protein Sci. 6, 1139-1147.
53. Biekofsky, R. R., Martin, S. R., Browne, J. P., Bayley, P. M., and Feeney, J. (1998) Biochemistry 37, 7617-7629.
54. Koshiba, S., Kigawa, T., Iwahara, J., Kikuchi, A., and Yokoyama S. (1999) FEBS Lett. 442, 138-142.
55. Torrisi, M. R., Lotti, L. V., Belleudi, F., Gradini, R., Salcini, A. E., Confalonieri, S., Pelicci, P. G., and Di Fiore, P. P. (1999) Mol. Biol. Cell 10, 417-434.
56. Nicholls, A., Sharp, K. A., and Honig, B. (1991) Proteins 11, 281-296.
57. Kretsinger, R. H. (1980) CRC Crit. Rev. Biochem. 8, 119-174.
58. Nico Tjandra. Interhlx program (October 20, 1998) http:// diana.oci.utoronto.ca/ikura/datasoft.html.