-
2
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae
-
Fleischmann, R. D. et al. Whole-genome random sequencing and assembly of Haemophilus influenzae. Science 269, 496-512 (1995).
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
-
3
-
-
0020465927
-
Nucleotide sequence of bacteriophage lambda DNA
-
Sanger, F., Coulson, A. R., Hong, G. E., Hill, D. F. & Petersen, S. Nucleotide sequence of bacteriophage lambda DNA. J. Mol. Biol. 162, 729 (1982).
-
(1982)
J. Mol. Biol.
, vol.162
, pp. 729
-
-
Sanger, F.1
Coulson, A.R.2
Hong, G.E.3
Hill, D.F.4
Petersen, S.5
-
4
-
-
0001899550
-
TIGR assembler: A new tool for assembling large shotgun sequencing projects
-
Sutton, G. G., White, O., Adams, M. D. & Kerlavage, A. R. TIGR Assembler: a new tool for assembling large shotgun sequencing projects. Genome Sci. Technol. 1, 9-19 (1995).
-
(1995)
Genome Sci. Technol.
, vol.1
, pp. 9-19
-
-
Sutton, G.G.1
White, O.2
Adams, M.D.3
Kerlavage, A.R.4
-
5
-
-
0033485517
-
Improved microbial gene identification with glimmer
-
Delcher, A. I., Harmon, D., Kasif, S., White, O. & Salzberg, S. I., Improved microbial gene identification with Glimmer. Nucleic Acids Res. 27, 4636-4641 (1999).
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.I.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.I.5
-
6
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T. & Eddy, S. R. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25, 955-964 (1997).
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 955-964
-
-
Lowe, T.1
Eddy, S.R.2
-
7
-
-
0033976458
-
The Pfam protein families database
-
Bateman, A. et al. The Pfam Protein Families Database. Nucleic Acids Res. 28, 263-266 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 263-266
-
-
Bateman, A.1
-
8
-
-
0001271789
-
Phylogenetic structure of the prokaryotic domain: The primary kingdoms
-
Woese, C. R. & Fox, G. E. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc. Natl Acad. Sci. USA 74, 5088-5090 (1977).
-
(1977)
Proc. Natl Acad. Sci. USA
, vol.74
, pp. 5088-5090
-
-
Woese, C.R.1
Fox, G.E.2
-
9
-
-
0030091189
-
Origins and evolution of antibiotic resistance
-
Davies, J. Origins and evolution of antibiotic resistance. Microbiology 12, 9-16 (1996).
-
(1996)
Microbiology
, vol.12
, pp. 9-16
-
-
Davies, J.1
-
10
-
-
0032482924
-
Molecular archaeology of the Escherichia coli genome
-
Lawrence, J. G. & Ochman, H. Molecular archaeology of the Escherichia coli genome. Proc. Natl. Acad. Sci. USA 95, 9413-9417 (1998).
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 9413-9417
-
-
Lawrence, J.G.1
Ochman, H.2
-
11
-
-
0033603539
-
Phylogenetic classification and the universal tree
-
Doolittle, W. F. Phylogenetic classification and the universal tree. Science 284, 2124-2129 (1999).
-
(1999)
Science
, vol.284
, pp. 2124-2129
-
-
Doolittle, W.F.1
-
12
-
-
0033082247
-
Mosaic bacterial chromosomes: A challenge en route to a tree of genomes
-
Martin, W. Mosaic bacterial chromosomes: a challenge en route to a tree of genomes. Bioessays 21, 99-104 (1999).
-
(1999)
Bioessays
, vol.21
, pp. 99-104
-
-
Martin, W.1
-
13
-
-
0031736121
-
Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles
-
Aravind, L., Tatusov, R. L., Wolf, Y. I., Walker, D. R. & Koonin, E. V. Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles. Trends Genet. 14, 442-444 (1998).
-
(1998)
Trends Genet.
, vol.14
, pp. 442-444
-
-
Aravind, L.1
Tatusov, R.L.2
Wolf, Y.I.3
Walker, D.R.4
Koonin, E.V.5
-
14
-
-
0033609333
-
Genome sequencing of thermotoga muritima: Evidence for lateral gene transfer between bacteria and archaea
-
Nelson, K. E. et al. Genome sequencing of Thermotoga muritima: evidence for lateral gene transfer between bacteria and archaea. Nature 399, 323-329 (1999).
-
(1999)
Nature
, vol.399
, pp. 323-329
-
-
Nelson, K.E.1
-
15
-
-
0342768762
-
Archaeal and bacterial hyperthermophiles: Horizontal gene exchange or common ancestry?
-
Kyrpides, N. C. & Olsen, G. J. Archaeal and bacterial hyperthermophiles: horizontal gene exchange or common ancestry? Trends Genet 15, 298-299 (1999).
-
(1999)
Trends Genet
, vol.15
, pp. 298-299
-
-
Kyrpides, N.C.1
Olsen, G.J.2
-
16
-
-
0033118273
-
Proteome composition and codon usage in spirochaetes: Species-specific and DNA strand-specific mutational biases
-
Lafay, B. et al. Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases. Nucleic Acids Res. 27, 1642-1649 (1999).
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1642-1649
-
-
Lafay, B.1
-
17
-
-
0027616543
-
Alignment-ambigous nucleotide sites and the exclusion of systematic data
-
Gatesy, J., Desalle, R. & Wheller, W. Alignment-ambigous nucleotide sites and the exclusion of systematic data. Mol. Phylog. Evol. 2, 152-157 (1993).
-
(1993)
Mol. Phylog. Evol.
, vol.2
, pp. 152-157
-
-
Gatesy, J.1
Desalle, R.2
Wheller, W.3
-
18
-
-
0032874259
-
The rooting of the universal tree of life is not reliable
-
Philippe, H. & Forterre, P. The rooting of the universal tree of life is not reliable. J. Mol. Evol. 49, 509-523 (1999).
-
(1999)
J. Mol. Evol.
, vol.49
, pp. 509-523
-
-
Philippe, H.1
Forterre, P.2
-
19
-
-
0029610851
-
The RecA protein as a model molecular systematic studies of bacteria: Comparison of trees of RecAs and 16s rRNAs from the same species
-
Eisen, J. A. The RecA protein as a model molecular systematic studies of bacteria: comparison of trees of RecAs and 16s rRNAs from the same species. J. Mol. Evol. 41, 1105-1123 (1995).
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 1105-1123
-
-
Eisen, J.A.1
-
20
-
-
0032900532
-
Genome phylogioy based on gene content
-
Snel, B., Bork, P. & Huynen, M. A. Genome phylogioy based on gene content. Nature Genet. 21, 108-110 (1999).
-
(1999)
Nature Genet.
, vol.21
, pp. 108-110
-
-
Snel, B.1
Bork, P.2
Huynen, M.A.3
-
21
-
-
0032766490
-
Comparative genomics of the Archaea (Euyarchaeota): Evolution of conserved protein families, the stable core, and the variable shell
-
Makarova, K. S. et al. Comparative genomics of the Archaea (Euyarchaeota): evolution of conserved protein families, the stable core, and the variable shell. Genome Res. 9, 608-628 (1999).
-
(1999)
Genome Res.
, vol.9
, pp. 608-628
-
-
Makarova, K.S.1
-
22
-
-
0034724342
-
An archaeal genomic signature
-
Graham, D. E., Overbeek, R., Olsen, G. J. & Woese, C. R. An archaeal genomic signature. Proc. Natl Acad. Sci. USA 97, 3304-3308 (2000).
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 3304-3308
-
-
Graham, D.E.1
Overbeek, R.2
Olsen, G.J.3
Woese, C.R.4
-
23
-
-
0033616714
-
Horizontal gene transfer among genomes: The complexity hypothesis
-
Jain, R., Rivera, M. Lake, J. A. Horizontal gene transfer among genomes: the complexity hypothesis. Proc. Natl. Acad. Sci. USA 96, 3801-3806 (1999).
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3801-3806
-
-
Jain, R.1
Rivera, M.2
Lake, J.A.3
-
24
-
-
0033552961
-
Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen. Helicobacter pylori
-
Alm, R. A. et al. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen. Helicobacter pylori. Nature 397, 176-180 (1999).
-
(1999)
Nature
, vol.397
, pp. 176-180
-
-
Alm, R.A.1
-
25
-
-
0034654345
-
Genome sequences of Chlomydia trachomatis MoPn and Chlamydia pneumoniae AR39
-
Read, T. D. et al. Genome sequences of Chlomydia trachomatis MoPn and Chlamydia pneumoniae AR39. Nucleic Acids Res. 28, 1397-1406 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1397-1406
-
-
Read, T.D.1
-
26
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb, J. F. et al. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388, 539-547 (1997).
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
-
27
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complex genome sequence
-
Cole, S. T. et al. Deciphering the biology of Mycobacterium tuberculosis from the complex genome sequence. Nature 393, 537-544 (1998).
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
-
28
-
-
0028829125
-
The minimal gene complement of Mycoplasma genetalium
-
Fraser, C. M. et al. The minimal gene complement of Mycoplasma genetalium. Science 270, 397-403 (1995).
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
-
29
-
-
10544255079
-
Complete sequence analysis of the genome of the bacterium, Mycoplasma pneumoniae
-
Himmelreich, R. et al. Complete sequence analysis of the genome of the bacterium, Mycoplasma pneumoniae. Nucleic Acids Res. 24, 4420-4291 (1996).
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 4420-14291
-
-
Himmelreich, R.1
-
30
-
-
0032540874
-
Complete genome sequence of Treponema pallidum, the syphilis spirochete
-
Fraser, C. M. et al. Complete genome sequence of Treponema pallidum, the syphilis spirochete. Science 281, 375-388 (1998).
-
(1998)
Science
, vol.281
, pp. 375-388
-
-
Fraser, C.M.1
-
31
-
-
12744257602
-
Chromosome 2 sequence of the human malaria parasite plasmodium falciparum
-
Gardner, M. J. et al. Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum. Science 282, 1126-1132 (1998).
-
(1998)
Science
, vol.282
, pp. 1126-1132
-
-
Gardner, M.J.1
-
32
-
-
0031470826
-
Genomic sequence of a lyme disease spirochaete. Borrelia burgdorferi
-
Fraser, C. M. et al. Genomic sequence of a lyme disease spirochaete. Borrelia burgdorferi. Nature 390, 580-586 (1997).
-
(1997)
Nature
, vol.390
, pp. 580-586
-
-
Fraser, C.M.1
-
33
-
-
0029618707
-
Characterization of repetitive DNA in the Mycoplasma genitalium genome: Possible role in the generation of antigenic variation
-
Peterson, S. N. et al. Characterization of repetitive DNA in the Mycoplasma genitalium genome: possible role in the generation of antigenic variation. Proc. Natl Acad Sci. USA 92, 11829-11833 (1995).
-
(1995)
Proc. Natl Acad Sci. USA
, vol.92
, pp. 11829-11833
-
-
Peterson, S.N.1
-
34
-
-
0034629284
-
Identification of vaccine candidates against serogroup B meningococcus by whole genome sequencing
-
Pizza, M. et al. Identification of vaccine candidates against serogroup B meningococcus by whole genome sequencing. Science 287, 1816-1820 (2000).
-
(2000)
Science
, vol.287
, pp. 1816-1820
-
-
Pizza, M.1
-
35
-
-
0034629478
-
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58
-
Tettelin, H. et al. Complete genome sequence of Neisseria meningitidis serogroup B strain MC58. Science 287, 1809-1815 (2000).
-
(2000)
Science
, vol.287
, pp. 1809-1815
-
-
Tettelin, H.1
-
36
-
-
0033520336
-
Inhibitors of the nonmevalonate pathway of isoprenoid biosynthesis as antimalarial drugs
-
Jomaa, H. et al. Inhibitors of the nonmevalonate pathway of isoprenoid biosynthesis as antimalarial drugs. Science 285, 1573-1576 (1999).
-
(1999)
Science
, vol.285
, pp. 1573-1576
-
-
Jomaa, H.1
-
37
-
-
0033520437
-
Planting the seeds of new antirmalarial drugs
-
Ridley, R. G. Planting the seeds of new antirmalarial drugs. Science 285, 1502-1503 (1999).
-
(1999)
Science
, vol.285
, pp. 1502-1503
-
-
Ridley, R.G.1
|