Identification of mariner-like elements from the root-knot nematode Meloidogyne spp.

Molecular and Biochemical Parasitology

Volumn 107, Issue 2, 2000, Pages 181-190

  Leroy, Hélène ^a   Leroy, Frédéric ^a   Augé Gouillou, Corinne ^b   Castagnone Sereno, Philippe ^a   Vanlerberghe Masutti, Flavie ^a   Bigot, Yves ^b   Abad, Pierre ^a  

^a CEMAGREF   (France)

^b UNIVERSITÉ DE TOURS   (France)

Author keywords

Mariner; Meloidogyne; Plant parasitic nematode; Transposable element

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; CONTROLLED STUDY; HOST PARASITE INTERACTION; MELOIDOGYNE; NEMATODE; NONHUMAN; OPEN READING FRAME; PHYLOGENY; PLANT ROOT; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SOUTHERN BLOTTING; TRANSPOSON;

AMINO ACID SEQUENCE; ANIMALS; BLOTTING, SOUTHERN; CLONING, MOLECULAR; DNA TRANSPOSABLE ELEMENTS; DNA, HELMINTH; GENE DOSAGE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANTS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; TYLENCHOIDEA;

MELOIDOGYNE; MELOIDOGYNE JAVANICA; NEMATODA;

EID: 0034656338     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0166-6851(00)00183-3     Document Type: Article

References (39)

1. Plasterk R.H. Reverse genetics of Caenorhabditis elegans. Bioassays. 14:1992;629-633.
2. Aeby P., Spicher A., de Chastonay Y., Mueller F., Tobler H. Structure and genomic organization of proretrovirus-like element partially eliminated from the somatic genome of Ascaris lumbricoides. EMBO J. 5:1986;3353-3360.
3. Wiley L.J., Riley L.G., Sangster N.C., Weiss A.S. mle, a mariner-like transposable element in the nematode Trichostrongylus colubriformis. Gene. 188:1997;235-237.
4. Mai W.F. Plant-parasitic nematodes: their threat to agriculture. Sasser J.N., Carter CC An Advanced Treatise on Meloidogyne. 1:1985;11-17 North Carolina State University Graphics, Raleigh.
5. Moerman D.G., Benian G.M., Waterston R.H. Molecular cloning of the muscle gene unc-22 in Caenorhabditis elegans by Tc1 transposon tagging. Proc. Natl. Acad. Sci. USA. 83:1986;2579-2583.
6. Searles L.L., Jokerst R.S., Bingham P.M., Voelker R.A., Greenleaf A.L. Molecular cloning of sequences from a Drosophila RNA polymerase II locus by P element transposon tagging. Cell. 31:1982;585-592.
7. Fedoroff N., Furtek D., Nelson O. Jr Cloning of the Bronze locus in maize by a simple and generalizable procedure using the transposable controlling element Ac. Proc. Natl. Acad. Sci. USA. 81:1984;3825-3829.
8. Jacobson J.W., Medhora M.M., Hartl D.L. Molecular structure of a somatically unstable transposable element in Drosophila. Proc. Natl. Acad. Sci. USA. 83:1986;8684-8688.
9. Lidholm D.A., Gudmundsson G.H., Boman H.G. A highly repetitive, mariner-like element in the genome of Hyalophora cecropia. J. Biol. Chem. 266(18):1991;11518-11521.
10. Robertson H.M., MacLeod E.G. Five major subfamilies of mariner transposable elements in insects, including the Mediterranean fruit fly, and related arthropods. Insect Mol. Biol. 2:1993;125-139.
11. Sedensky M.M., Hudson S.J., Everson B., Morgan P.G. Identification of a mariner-like repetitive sequence in C. elegans. Nucleic Acids Res. 22:1994;1719-1723.
12. Bigot Y., Hamelin M.H., Capy P., Periquet G. Mariner-like elements in hymenopteran species: insertion site and distribution. Proc. Natl. Acad. Sci. USA. 91:1994;3408-3412.
13. Augé-Gouillou C., Bigot Y., Pollet N., Hamelin M.H., Meunier-Rotival M., Periquet G. Human and other mammalian genomes contain transposons of the mariner family. FEBS Lett. 368:1995;541-546.
14. Jarvik T., Lark K.G. Characterization of Soymar1, a mariner element in soybean. Genetics. 149:1998;1569-1574.
15. Lohe A.R., De Aguiar D., Hartl D.L. Mutations in the transposase: The D,D(35)E consensus sequence is nonfunction(n)al. Proc. Natl. Acad. Sci. USA. 94:1997;1293-1297.
16. Medhora M.M., MacPeek A.H., Hartl D.L. Excision of the Drosophila transposable element mariner: identification and characterization of the Mos factor. EMBO J. 7:1988;2185-2189.
17. Medhora M., Maruyama K., Hartl D.L. Molecular and functional analysis of the mariner mutator element Mos1 in Drosophila. Genetics. 128:1991;311-318.
18. Robertson H.M. The mariner transposable element is widespread in insects. Nature. 362:1993;241-245.
19. Sulston J., Du Z., Thomas K., Wilson R., Hillier L., Staden R., Halloran N., Green P., Thierry-Mieg J., Qiu L., Dear S., Coulson A., Craxton M., Durbin R., Breks M., Metzstein M., Hawkins T., Ainscough R., Waterston R. The C. elegans genome sequencing project; a beginning. Nature. 356:1992;37-41.
20. Garcia-Fernàndez J., Marfany G., Baguñà J., Salo E. Infiltration of mariner elements. Nature. 364:1993;109-110.
21. Dalmasso A., Bergé J.B. Molecular polymorphism and phylogenetic relationship in some Meloidogyne spp.: application to the taxonomy of Meloidogyne. J. Nematol. 10:1978;323-332.
22. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual. 2nd edition:1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
23. Southern E.M. Detection of specific sequence among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 90:1975;503-517.
24. Higgings D.G., Bleasby A.J., Fuchs R. CLUSTAL V: improved software for multiple sequence alignment. Comput. Appl. Biosci. 8:1992;189-191.
25. Dessen P., Fondrat C., Valencien C., Mugnier C. A French service for access to biomolecular sequence databases. Cabios. 6:1990;355-356.
26. Felsenstein J. PHYLIP (Phylogeny Inference Package) version 3.5c. 1993;University of Washington, Seattle.
27. Robertson H.M., Asplund M. Bmmar1: a basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori. Insect Biochem. Mol. Biol. 26:1996;945-954.
28. Robertson H.M., Lampe D.J., MacLeod E.G. A mariner transposable element from a lacewing. Nucleic Acids Res. 20:1992;6409.
29. Robertson H.M. The Tc1-mariner superfamily of transposons in animals. J. Insect Physiol. 41:1995;99-105.
30. Craig N.L. Unity in transposition reactions. Science. 270:1995;253-254.
31. Grenier E., Abadon M., Brunet F., Capy P., Abad P. A mariner-like transposable element in the entomopathogenic nematode Heterorhabditis bacteriophora, horizontal transmission versus ancient origin. J. Mol. Evol. 48:1999;328-336.
32. Robertson H.M., Lampe D.J. Recent horizontal transfer of a mariner transposable element among and between Diptera and Neuroptera. Mol. Biol. Evol. 12(5):1995;850-862.
33. Triantaphyllou A.C. Cytogenetics, cytotaxonomy and phylogeny of root-knot nematodes. Sasser J.N., Carter C.C. An Advance Treatise on Meloidogyne. 1:1985;113-126 North Carolina State University Graphics, Raleigh.
34. Garcia-Fernàndez J., Bayascas-Ramirez J.R., Marfany G., Muñoz-Marmol A.M., Casali A., Baguñà J., Salo E. High copy number of highly similar mariner-like transposons in Planarian (Platyhelminthe): evidence for a Trans-Phyla horizontal transfer. Mol. Biol. Evol. 12(3):1995;421-431.
35. Hartl Daniel L., Lohe Allan R., Lozovskaya Elena R. Modern thoughts on an ancyent marinere: fonction, evolution, regulation. Annu. Rev. Genet. 31:1997;337-358.
36. Maruyama K., Hartl D.L. Evidence for interspecific transfer of the transposable element mariner between Drosophila and Zaprionus. J. Mol. Evol. 33:1991;514-524.
37. Brunet B., Godin F., David J.R., Capy P. The mariner transposable element in natural populations of Drosophila teissieri. Heredity. 73:1994;377-385.
38. Kaplan N., Darden T., Langley C.H. Evolution and extinction of transposable elements in Mendelian populations. Genetics. 109:1985;459-480.
39. Lohe A.R., Moriyama E.N., Lidholm D.A., Hartl D.L. Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements. Mol. Biol. Evol. 12:1995;62-72.