AAA proteins: Lords of the ring

Journal of Cell Biology

Volumn 150, Issue 1, 2000, Pages

  Vale, Ronald D ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ENZYME; OLIGOMER;

CONFORMATIONAL TRANSITION; DNA REPLICATION; ENZYME ACTIVITY; MEMBRANE TRANSPORT; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DEGRADATION; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN PROTEIN INTERACTION; PROTEIN SYNTHESIS; SHORT SURVEY;

EID: 0034632063     PISSN: 00219525     EISSN: None     Source Type: Journal    
DOI: 10.1083/jcb.150.1.f13     Document Type: Short Survey

References (44)

1. Arlt, H., R. Tauer, H. Feldmann, W. Neupert, and T. Langer. 1996. The YTA10-12 complex, an AAA protease with chaperone-like activity in the inner membrane of mitochondria. Cell. 85:875-885.
2. Babor, S.M., and D. Fass. 1999. Crystal structure of the Sec18p N-terminal domain. Proc. Natl. Acad. Sci. USA. 96:14759-14764.
3. Babst, M., B. Wendland, E.J. Estepa, and S.D. Emr. 1998. The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function. EMBO (Eur. Mol. Biol. Organ.) J. 17:2982-2993.
4. Barnard, R.J., A. Morgan, and R.D. Burgoyne. 1997. Stimulation of NSF ATPase activity by alpha-SNAP is required for SNARE complex disassembly and exocytosis. J. Cell Biol. 139:875-883.
5. Baumeister, W., J. Walz, F. Zuhl, and E. Scemuller. 1998. The proteasome: paradigm of a self-compartmentalizing protease. Cell. 92:367-380.
6. Bochtler, M., C. Hartmann, H.K. Song, G.P. Bourenkov, H.D. Bartunik, and R. Huber. 2000. The structures of HsIU and the ATP-dependent protease HsIU-HsIV. Nature. 403:800-805.
7. Burgess, S.A. 1995. Rigor and relaxed outer dynein arms in replicas of cryofixed motile flagella. J. Mol. Biol. 250:52-63.
8. Confalonieri, F., and M. Duguet. 1995. A 200-amino acid ATPase module in search of a basic function. Bioessays. 17:639-650.
9. Dye, R.B., P.F. Flicker, D.Y. Lien, and R.C. Williams, Jr. 1992. End-stabilized microtubules observed in vitro: stability, subunit interchange, and breakage. Cell Motil. Cytoskeleton. 21:171-186.
10. Farr, G.W., K. Furtak, M.B. Rowland, N.A. Ranson, H.R. Saibil, T. Kirchhausen, and A.L. Horwich. 2000. Multivalent binding of nonnative substrate proteins by the chaperonin GroEL. Cell. 100:561-573.
11. Fasshauer, D., H. Otto, W.K. Eliason, R. Jahn, and A.T. Brunger. 1997. Structural changes are associated with soluble N-ethylmaleimide-sensitive fusion protein attachment protein receptor complex formation. J. Biol. Chem. 272: 28036-28041.
12. Gee, M.A., J.E. Heuser, and R.B. Vallee. 1997. An extended microtubule-binding structure with the dynein motor domain. Nature. 390:636-639.
13. Goodenough, U.W., and J.E. Heuser. 1982. Substructure of the outer dynein arm. J. Cell Biol. 96:798-815.
14. Guenther, B., R. Onrust, A. Sali, M. O'Donnell, and J. Kuriyan. 1997. Crystal structure of the δ′ subunit of the clamp-loader complex of E. coli DNA polymerase III. Cell. 91:335-345.
15. Hanson, P.I., R. Roth, H. Morisaki, R. Jahn, and J.E. Heuser. 1997. Structure and conformational changes in NSF and ils membrane receptor complexes visualized by quick-freeze/deep-etch electron microscopy. Cell. 90:523-535.
16. Hartman, J.J., J. Mahr, K. McNally, K. Okawa, A. Iwamatsu, S. Thomas, S. Cheesman, J. Heuser, R.D. Vale, and F.J. McNally. 1998. Katanin, a microtubule-severing protein, is a novel AAA ATPase that targets to the centrosome using a WD40-containing subunit. Cell. 93:277-287.
17. Hartman, J.J., and R.D. Vale. 1999. Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin. Science. 286:782-785.
18. Hohl, T.M., F. Parlati, C. Wimmer, J.E. Rothman, T.H. Sollner, and H. Engelhardt. 1998. Arrangement of subunits in 20 S particles consisting of NSF. SNAPs, and SNARE complexes. Mol. Cell 2:539-548.
19. Hoskins, J.R., M. Pak, M.R. Maurizi, and S. Wickner. 1998. The role of the ClpA chaperone in proteolysis by ClpAP. Proc. Natl. Acad. Sci. USA. 95: 12135-12140.
20. Karata, K., T. Inagawa, A.J. Wilkinson, T. Tatsuta, and T. Ogura. 1999. Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases. Site-directed mutagenesis of the ATP-dependent protease FtsH. J. Biol. Chem. 274:26225-26232.
21. Koonce, M.P. 1997. Identification of a microtubule-binding domain in a cytoplasmic dynein heavy chain. J. Biol. Chem. 272:19714-19718.
22. Lenzen, C.U., D. Steinmann, S.W. Whiteheart, and W.I. Weis. 1998. Crystal structure of the hexamerization domain of N-ethylmaleimide-sensitive fusion protein. Cell. 94:525-536.
23. Leonhard, K., A. Stiegler, W. Neupert, and T. Langer. 1999. Chaperone-like activity of the AAA domain of the yeast Yme1 AAA protease. Nature. 398: 348-351.
24. May, A.P., K.M.S. Misura, S.W. Whiteheart, and W.I. Weis. 1999. Crystal structure of the amino-terminal domain of N-ethylmaleimide-sensitive fusion protein. Nature Cell Biol. 1:175-182.
25. Mocz, G., and I.R. Gibbons. 1996. Phase partition analysis of nucleotide binding to axonemal dynein. Biochemistry. 35:9204-9211.
26. Nagiec, E.E., A. Bernstein, and S.W. Whiteheart. 1995. Each domain of the N-ethylmaleimide-sensitive fusion protein contributes to its transport activity. J. Biol. Chem. 270:29182-29188.
27. Neuwald, A.F., L. Aravind, J.L. Spouge, and E.V. Koonin. 1999. AAA+: a class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res. 9:27-43.
28. Pak, M., J.R. Hoskins, S.K. Singh, M.R. Maurizi, and S. Wickner. 1999. Concurrent chaperone and protease activities of ClpAP and the requirement for the N-terminal ClpA ATP binding site for chaperone activity. J. Biol. Chem. 274:19316-19322.
29. Patel, S., and M. Latterich. 1998. The AAA team: related ATPases with diverse functions. Trends Cell Biol. 8:65-71.
30. Porter, M.E., and K.A. Johnson. 1983. Transient state kinetic analysis of the ATP-induced dissociation of the dynein-microtubule complex. J. Biol. Chem. 258:6582-6587.
31. Quarmby, L. 2000. Cellular samurai: katanin and the severing of microtubules. J. Cell Sci. In press.
32. Rice, L.M., and A.T. Brunger. 1999. Crystal structure of the vesicular transport protein Sec17: implications for SNAP function in SNARE complex disassembly. Mol. Cell 4:85-95.
33. Rubin, D.M., M.H. Glickman, C.N. Larsen, S. Dhruvakumar, and D. Finley, 1998. Active site mutants in the six regulatory particle ATPases reveal multiple roles for ATP in the proteasome. EMBO (Eur. Mol. Biol. Organ.) J. 17: 4909-4919.
34. Samso, M., M. Radermacher, J. Frank, and M.P. Koonce. 1998. Structural characterization of a dynein motor domain. J. Mol. Biol. 276:927-937.
35. Shingyoji, C., H. Higuchi, M. Yoshimura, E. Katayama, and T. Yanagida. 1998. Dynein arms are oscillating force generators. Nature. 393:711-714.
36. Shtilerman, M., G.H. Lorimer, and S.W. Englander. 1999. Chaperonin function: folding by forced unfolding. Science. 284:822-825.
37. Singh, S.K., F. Guo, and M.R. Maurizi. 1999. ClpA and ClpP remain associated during multiple rounds of ATP-dependent protein degradation by ClpAP protease. Biochemistry. 38:14906-14915.
38. Sutton, R.B., D. Fasshauer, R. Jahn, and A.T. Brunger. 1998. Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 Å resolution. Nature. 395:347-353.
39. Turner, J., M.M. Hingorani, Z. Kelman, and M. O'Donnell. 1999. The internal workings of a DNA polymerase clamp-loading machine. EMBO (Eur. Mol. Biol. Organ.) J. 18:771-783.
40. Vale, R.D., and R.M. Milligan. 2000. The way things move: looking under the hood of molecular motor proteins. Science. 288:88-95.
41. Weber-Ban, E.U., B.G. Reid, A.D. Miranker, and A.L. Horwich. 1999. Global unfolding of a substrate protein by the Hsp100 chaperone ClpA. Nature. 401: 90-93.
42. Whiteheart, S.W., K. Rossnagel, S.A. Buhrow, M. Brunner, R. Jaenicke, and J.E. Rothman. 1994. N-ethylmaleimide-sensitive fusion protein: a trimeric ATPase whose hydrolysis of ATP is required for membrane fusion. J. Cell Biol. 126:945-954.
43. Yu, R.C., P.I. Hanson, R. Jahn, and A.T. Brunger. 1998. Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP. Nature Struct. Biol. 5:803-811.
44. Yu, R.C., R. Jahn, and A.T. Brunger. 1999. NSF N-terminal domain crystal structure: models of NSF function. Mol. Cell. 4:97-107.