Investigation of the DsbA mechanism through the synthesis and analysis of an irreversible enzyme-ligand complex

Biochemistry

Volumn 39, Issue 22, 2000, Pages 6732-6742

  Couprie, Joël ^a   Vinci, Floriana ^b   Dugave, Christophe ^a   Quéméneur, Eric ^a,c   Mouliez, Mireille ^a  

^a CEA SACLAY   (France)

^b UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^c DIF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; CYSTEINE; CYSTINE; DISULFIDE; LIGAND; OXIDOREDUCTASE; THIOLACID;

ARTICLE; COMPLEX FORMATION; COVALENT BOND; DISULFIDE BOND; ENTHALPY; ENZYME BINDING; ENZYME DENATURATION; ENZYME MECHANISM; ENZYME STABILITY; ENZYME STRUCTURE; LIGAND BINDING; NUCLEAR OVERHAUSER EFFECT; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; THERMODYNAMICS;

ALKYLATION; BACTERIAL PROTEINS; BROMINE COMPOUNDS; CALORIMETRY, DIFFERENTIAL SCANNING; ESCHERICHIA COLI; LIGANDS; MAGNETIC RESONANCE SPECTROSCOPY; PEPTIDE FRAGMENTS; PERIPLASM; PROTEIN DISULFIDE-ISOMERASE; SULFIDES; THERMODYNAMICS;

BACTERIA (MICROORGANISMS);

EID: 0034612337     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi992873f     Document Type: Article

References (57)

1. Freedman, R. B. (1995) Curr. Opin. Struct. Biol. 5, 85-91.
2. Creighton, T., Zapun, A., and Darby, N. (1995) Trends Biotrchnol. 13, 18-23.
3. Raina, S., and Missiakas, D. (1997) Annu. Rev. Microbiol. 51, 179-202.
4. Creighton, T. E., and Freedman, R. B. (1993) Curr. Biol. 3, 790-793.
5. Chivers, P. T., Laboissiere, M. C. and Raines, R. T. (1996) EMBO J. 15, 2659-2667.
6. Martin, J. L., Bardwell, J. C., and Kuriyan, J. (1993) Nature 365, 464-468.
7. Guddat, L. W., Bardwell, J. C. A., Zander, T., and Martin, J. L. (1997) Protein Sci. 6, 1148-1156.
8. Darby, N. J., and Creighton, T. E. (1995) Biochemistry 34, 3576-3587.
9. Wunderlich, M., and Glockshuber, R. (1993) Protein Sci. 2, 717-726.
10. Nelson, J. W., and Creighton, T. E. (1994) Biochemistry 33, 5974-5983.
11. Bardwell, J., Lee, J.-O., Jander, G., Martin, N., Belin, D., and Beckwith, J. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 1038-1042.
12. Guilhot, C., Jander, G., Martin, N. L., and Beckwith, J. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9895-9899.
13. Kishigami, S., Kanaya, E., Kikuchi, M., and Ito, K. (1995) J. Biol. Chem. 270, 17072-17074.
14. Frech, C., Wunderlich, M., Glockshuber, R., and Schmid, F. X. (1996) EMBO J. 15, 392-398.
15. Lin, S.-R., Chang, L.-S., and Chang, C.-C. (1999) Biochem. Biophys. Res. Commun. 254, 104-108.
16. Nakamura, K., Era, S., Ozaki, Y., Sogami, M., Hayashi, T., and Murakami, M. (1997) FEBS Lett. 417, 375-378.
17. Dugave, C., and Ménez, A. (1997) Tetrahedron Asymm. 8, 1453-1465.
18. Mayer, J., Zhang, J., Groeger, S., Liu, C., and Jarosinski, M. (1998) J. Pept. Res. 51, 432-436.
19. Sieber, P., and Riniker, B. (1987) Tetrahedron Lett., 6031-6034.
20. Davis, A. L., Laue, E. D., Keeler, J., Moskau, D., and Lohman, J. (1991) J. Magn. Reson. 94, 637-644.
21. Cavanagh, J., and Rance, M. (1990) J. Magn. Reson. 88, 72-85.
22. Shaka, A. J., Lee, C. J., and Pines, A. (1988) J. Magn. Reson. 77, 274-293.
23. Kumar, A., Ernst, R. R., and Wüthrich, K. (1980) Biochem. Biophvs. Res. Commun. 95, 1-6.
24. Desvaux, H., Berthault, P., Birlirakis, N., and Goldman, M. (1993) J. Magn. Reson. A108, 219-229.
25. Desvaux, H., Berthault, P., Birlirakis, N., Goldman, M., and Piotto, M. (1995) J. Magn. Reson. A113, 47-52.
26. Kay, L. E., Keifer, P., and Saarinen, T. (1992) J. Am. Chem. Soc. 114, 10663-10665.
27. Grzesiek, S., and Bax, A. (1993) J. Biomol. NMR 3, 185-204.
28. Wishart, D. S., Sykes, B. D., and Richards, F. M. (1992) Biochemistry 31, 1647-1651.
29. Wishart, D. S., and Sykes, B. D. (1994) J. Biomol. NMR 4, 171-180.
30. Wishart, D. S., Colin, G. B., Holm, A., Hodges, R. S., and Sykes, B. D. (1995) J. Biomol. NMR 5, 67-81.
31. Couprie, J., Remerowski, M., Bailleul, A., Courçon, M., Gilles, N., Quéméneur, E., and Jamin, N. (1998) Protein Sci. 7, 2065-2080.
32. Ikura, M., and Bax, A. (1992) J. Am. Chem. Soc. 114, 2433-2440.
33. Ogura, K., Terasawa, H., and Inagaki, F. (1996) J. Biomol. NMR 8, 492-498.
34. Zwahlen, C., Legault, P., Vincent, S. J. F., Greenblatt, J., Konrat, R., and Kay, L. E. (1997) J. Am. Chem. Soc. 119, 6711-6721.
35. Piotto, M., Saudek, V., and Sklenar, V. (1992) J. Biomol. NMR 2, 661-665.
36. Shaka, A. J., Barker, P. B., and Freeman, R. (1985) J. Magn. Reson. 64, 547-552.
37. Marion, D., Ikura, M., Tschudin, R., and Bax, A. (1989) J. Magn. Reson. 85, 393-399.
38. Moutiez, M., Burova, T., Haertlé, T., and Quéméneur, E. (1999) Protein Sci. 8, 106-112.
39. Barlos, K., Gatos, D., Koutsogianni, S., Schafer, W., Stavropoulos, G., and Wenqing, Y. (1991) Tetrahedron Lett. 32, 471-474.
40. Rabinowitz, R., and Marcus, R. (1962) J. Am. Chem. Soc. 84, 1312-1313.
41. Ramirez, F., Desai, N., and McKelvie, N. (1962) J. Am. Chem. Soc. 84, 1745-1747.
42. Wüthrich, K. (1986) NMR of proteins and nucleic acids, John Wiley & Sons, Inc., New York.
43. Grathwohl, C., and Wüthrich, K. (1976) Biopolymers 15, 2025-2041.
44. Grathwohl, C., and Wüthrich, K. (1981) Biopolymers 20, 2623-2633.
45. Ruoppolo, M., Freedman, R. B., Pucci, P., and Marino, G. (1996) Biochemistry 35, 13636-13646.
46. Ruoppolo, M., Lundström-Ljung, J., Talamo, F., Pucci, P., and Marino, G. (1997) Biochemistry 36, 12259-12267.
47. Ruoppolo, M., Moutiez, M., Mazzeo, M., Pucci, P., Ménez, A., Marino, G., and Quéméneur, E. (1998) Biochemistry 37, 16060-16068.
48. Zapun, A., Bardwell, J. C., and Creighton, T. E. (1993) Biochemistry 32, 5083-5092.
49. Bushweller, J., Billeter, M., Holmgren, A., and Wüthrich, K. (1994) J. Mol. Biol. 235, 1585-1597.
50. Nordstrand, K., Aslund, F., Holmgren, A., Otting, G., and Berndt, K. (1999) J. Mol. Biol. 286, 541-552.
51. Qin, J., Clore, G. M., Kennedy, W. M., Huth, J. R., and Gronenborn, A. M. (1995) Structure 3, 289-297.
52. Qin, J., Clore, G., Kennedy, W., Kuszewski, J., and Gronenborn, A. (1996) Structure 4, 613-620.
53. Berardi, M., Pendred, C., and Bushweller, J. (1998) Biochemistry 37, 5849-5857.
54. Berardi, M., and Bushweller, J. (1999) J. Mol. Biol. 292, 151-161.
55. Hennecke, J., Spleiss, C., and Glockshuber, R. (1997) J. Biol. Chem. 272, 189-195.
56. Guddat, L., Bardwell, J., and Martin, J. (1998) Curr. Biol. 6, 757-767.
57. Schirra, H., Renner, C., Czisch, M., Huber-Wunderlich, M., Holak, T., and Glockshuber, R. (1998) Biochemistry 37. 6263-6276.