Genomic organization and promoter characterization of the rat cyclin B1 gene

Gene

Volumn 255, Issue 1, 2000, Pages 93-104

  Trembley, Janeen H ^a,b   Chen, Zongyu ^a   Rodrigues, Cecilia M P ^a   Kren, Betsy T ^a   Steer, Clifford J ^a,b  

^a UNIVERSITY OF MINNESOTA MEDICAL SCHOOL   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Cell cycle; Consensus binding site; Liver regeneration; Reporter gene constructs; Transcription start point; Transcriptional repressor; Translation start site

Indexed keywords

CYCLIN B1; MESSENGER RNA; OLIGONUCLEOTIDE; PROTEIN P21; PROTEIN P53; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR AP 1; TRANSCRIPTION FACTOR AP 2; TRANSCRIPTION FACTOR ETS 1;

ARTICLE; BINDING SITE; DNA FLANKING REGION; DNA SEQUENCE; GENE DELETION; GENETIC ORGANIZATION; GENOME; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; TATA BOX; TRANSLATION INITIATION;

5' UNTRANSLATED REGIONS; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; CYCLIN B; DNA; DNA, COMPLEMENTARY; HELA CELLS; HUMANS; LUCIFERASES; MALE; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); RATS; RECOMBINANT FUSION PROTEINS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE DELETION; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRANSCRIPTION, GENETIC; TUMOR CELLS, CULTURED;

EID: 0034609436     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(00)00319-X     Document Type: Article

References (38)

1. Albrecht J.H., Hoffman J.S., Kren B.T., Steer C.J. Cyclin and cyclin-dependent kinase 1 mRNA expression in models of regenerating liver and human liver diseases. Am. J. Physiol. 265:1993;G857-G864.
2. Boussif O., Lezoualch F., Zanta M.A., Mergny M.D., Scherman D., Demeneix B., Behr J.-P. A versatile vector for gene and oligonucleotide transfer into cells in culture and in vivo: Polyethylenimine. Proc. Natl. Acad. Sci. USA. 92:1995;7297-7301.
3. Chapdelaine P., Delahaye S., Gauthier E., Tremblay R.R., Dubé J.Y. A one-hour procedure for the preparation of genomic DNA from frozen tissues. BioTechniques. 14:1993;163-164.
4. Chen Z., Faaberg K.S., Plagemann P.G.W. Determination of the 5′ end of the lactate dehydrogenase-elevating virus genome by two independent approaches. J. Gen. Virol. 75:1994;925-930.
5. Chu M.D., Sun J., Bird P. Cloning and sequencing of a cDNA encoding the murine vitamin K-dependent protein S. Biochim. Biophys. Acta. 1217:1994;325-328.
6. Cogswell J.P., Godlevski M.M., Bonham M., Bisi J., Babiss L. Upstream stimulatory factor regulates expression of the cell cycle-dependent cyclin B1 gene promoter. Mol. Cell. Biol. 15:1995;2782-2790.
7. Colgan J., Manley J.L. Cooperation between core promoter elements influences transcriptional activity in vivo. Proc. Natl. Acad. Sci. USA. 92:1995;1955-1959.
8. Dalton S. Cell cycle regulation of the human cdc2 gene. EMBO J. 11:1992;1797-1804.
9. Farina A., Gaetano C., Crescenzi M., Puccini F., Manni I., Sacchi A., Piaggio G. The inhibition of cyclin B1 gene transcription in quiescent NIH3T3 cells is mediated by an E-box. Oncogene. 13:1996;1287-1296.
10. Hanley-Hyde J., Mushinski J.F., Sadofsky M., Huppi K., Krall M., Kozak C.A., Mock B. Expression of murine cyclin B1 mRNAs and genetic mapping of related genomic sequences. Genomics. 13:1992;1018-1030.
11. Hautamaa D., Merica R., Chen Z., Jenkins M.K. Murine lymphotactin: gene structure, post-translational modification and inhibition of expression by CD28 costimulation. Cytokine. 9:1997;375-382.
12. Hwang A., Maity A., McKenna W.G., Muschel R.J. Cell cycle-dependent regulation of the cyclin B1 promoter. J. Biol. Chem. 270:1995;28419-28424.
13. Hwang A., McKenna W.G., Muschel R.J. Cell cycle-dependent usage of transcriptional start sites. J. Biol. Chem. 273:1998;31505-31509.
14. Innocente S.A., Abrahamson J.L.A., Cogswell J.P., Lee J.M. p53 regulates a G2 checkpoint through cyclin B1. Proc. Natl. Acad. Sci. USA. 96:1999;2147-2152.
15. Katula K.S., Wright K.L., Paul H., Surman D.R., Nuckolls F.J., Smith J.W., Ting J.P.-Y., Yates J., Cogswell J.P. Cyclin-dependent kinase activation and S-phase induction of the cyclin B1 gene are linked through the CCAAT elements. Cell Growth Differ. 8:1997;811-820.
16. Kren B.T., Steer C.J. Posttranscriptional regulation of gene expression in liver regeneration: role of mRNA stability. FASEB J. 10:1996;559-573.
17. Li L.-h., Nerlov C., Prendergast G., MacGregor D., Ziff E.B. c-Myc represses transcription in vivo by a novel mechanism dependent on the initiator element and Myc box II. EMBO J. 13:1994;4070-4079.
18. Lucibello F.C., Truss M., Zwicker J., Ehlert F., Beato M., Müller R. Periodic cdc25C transcription is mediated by a novel cell cycle-regulated repressor element (CDE). EMBO J. 14:1995;132-142.
19. Maity A., McKenna W.G., Muschel R.J. Evidence for post-transcriptional regulation of cyclin B1 mRNA in the cell cycle and following irradiation in HeLa cells. EMBO J. 14:1995;603-609.
20. Mandl C.W., Heinz F.X., Puchhammer-Stöckl E., Kunz C. Sequencing the termini of capped viral RNA by 5′-3′ ligation and PCR. BioTechniques. 10:1991;484-486.
21. Markiewicz D.A., McKenna W.G., Flick M.B., Maity A., Muschel R.J. The effects of radiation on the expression of a newly cloned and characterized rat cyclin B mRNA. Int. J. Radiat. Oncol. Biol. Phys. 28:1994;135-144.
22. Mischoulon D., Rana B., Bucher N.L.R., Farmer S.R. Growth-dependent inhibition of CCAAT enhancer-binding protein (C/EBPα) gene expression during hepatocyte proliferation in the regenerating liver and in culture. Mol. Cell. Biol. 12:1992;2553-2560.
23. Nordeen S.K. Luciferase reporter gene vectors for analysis of promoters and enhancers. BioTechniques. 6:1988;454-457.
24. Petit J., Riviere M., Szpirer J., Szpirer C. High level of single-nucleotide polymorphism in the rat cyclin B1 gene. Mamm. Genome. 10:1999;635-637.
25. Piaggio G., Farina A., Perrotti D., Manni I., Fuschi P., Sacchi A., Gaetano C. Structure and growth-dependent regulation of the human cyclin B1 promoter. Exp. Cell Res. 216:1995;396-402.
26. cdc2. Cell. 58:1989;833-846.
27. Roy A.L., Meisterernst M., Pognonec P., Roeder R.G. Cooperative interaction of an initiator-binding transcription initiation factor and the helix-loop-helix activator USF. Nature. 354:1991;245-248.
28. Roy A.L., Carruthers C., Gutjahr T., Roeder R.G. Direct role for Myc in transcription initiation mediated by interactions with TFII-I. Nature. 365:1993;359-361.
29. Sugarman J.L., Schönthal A.H., Glass C.K. Identification of a cell-type-specific and E2F-independent mechanism for repression of cdc2 transcription. Mol. Cell. Biol. 15:1995;3282-3290.
30. Tommasi S., Pfeifer G.P. In vivo structure of the human cdc2 promoter: release of a p130-E2F-4 complex from sequences immediately upstream of the transcription initiation site coincides with induction of cdc2 expression. Mol. Cell. Biol. 15:1995;6901-6913.
31. Trembley J.H., Kren B.T., Steer C.J. Posttranscriptional regulation of cyclin B messenger RNA expression in the regenerating rat liver. Cell Growth Differ. 5:1994;99-108.
32. Trembley J.H., Ebbert J.O., Kren B.T., Steer C.J. Differential regulation of cyclin B1 RNA and protein expression during hepatocyte growth in vivo. Cell Growth Differ. 7:1996;903-916.
33. Wang J., Zindy F., Chenivesse X., Lamas E., Henglein B., Bréchot C. Modification of cyclin A expression by hepatitis B virus DNA integration in a hepatocellular carcinoma. Oncogene. 7:1992;1653-1656.
34. cdc2 expression and normal p53 suppresses cyclin A expression. Exp. Cell Res. 210:1994;94-101.
35. Zauberman A., Lupo A., Oren M. Identification of p53 target genes through immune selection of genomic DNA: the cyclin G gene contains two distinct p53 binding sites. Oncogene. 10:1995;2361-2366.
36. Zhang Y.-J., Jiang W., Chen C.J., Lee C.S., Kahn S.M., Santella R.M., Weinstein I.B. Amplification and overexpression of cyclin D1 in human hepatocellular carcinoma. Biochem. Biophys. Res. Commun. 196:1993;1010-1016.
37. Zwicker J., Gross C., Lucibello F.C., Truss M., Ehlert F., Engeland K., Müller R. Cell cycle regulation of cdc25C transcription is mediated by the periodic repression of the glutamine-rich activators NF-Y and Sp1. Nucleic Acids Res. 23:1995;3822-3830.
38. Zwicker J., Lucibello F.C., Wolfraim L.A., Gross C., Truss M., Engeland K., Müller R. Cell cycle regulation of the cyclin A, cdc25C and cdc2 genes is based on a common mechanism of transcriptional repression. EMBO J. 14:1995;4514-4522.