Isolation and characterization of cytochrome c from the marine copepod Tigriopus californicus

Gene

Volumn 248, Issue 1-2, 2000, Pages 15-22

  Rawson, Paul D ^a   Brazeau, Daniel A ^b   Burton, Ronald S ^a  

^a UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

^b University of Florida ^*  (United States)

Author keywords

cDNA; Genomic DNA; Intron; Molecular evolution; Phylogeny

Indexed keywords

CYTOCHROME C;

ALLELE; AMINO ACID SEQUENCE; ARTICLE; COPEPOD; DNA LIBRARY; DNA SEQUENCE; ENZYME ANALYSIS; ENZYME ISOLATION; GENE EXPRESSION; GENETIC VARIABILITY; INHERITANCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SPECIES DIFFERENCE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CRUSTACEA; CYTOCHROME C GROUP; DNA; DNA, COMPLEMENTARY; EXONS; FEMALE; INTRONS; MALE; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; VARIATION (GENETICS);

COPEPODA; INVERTEBRATA; TIGRIOPUS CALIFORNICUS; VERTEBRATA;

EID: 0034595383     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(00)00145-1     Document Type: Article

References (26)

1. Adkins R.M., Honeycutt R.L., Disotell T.R. Evolution of eutherian cytochrome c oxidase subunit II: heterogeneous rates of protein evolution and altered interaction with cytochrome c. Mol. Biol. Evol. 13:1996;1393-1404.
2. Burton R.S. Evolutionary consequences of restricted gene flow in the intertidal copepod Tigriopus californicus. Bull. Mar. Sci. 39:1986;526-535.
3. Burton R.S. Genetic evidence for the persistence of marine invertebrate populations in an ephemeral habitat. Evolution. 51:1997;993-998.
4. Burton R.S., Lee B.-N. Nuclear and mitochondrial gene genealogies and allozyme polymorphism across a major phylogeographic break in the copepod Tigriopus californicus. Proc. Natl. Acad. Sci. USA. 91:1994;5197-5201.
5. Burton R.S., Rawson P.D., Edmands S. Genetic architecture of physiological phenotypes: empirical evidence for coadapted gene complexes. Am. Zool. 39:1999;451-462.
6. Cann R.L., Brown W.M., Wilson A.C. Polymorphic sites and the mechanism of evolution in human mitochondrial DNA. Genetics. 104:1984;699-711.
7. Capaldi R.A. The complexity of a respiratory complex. Nature Struct. Biol. 3:1996;570-574.
8. Cline J., Braman J.C., Hogrefe H.H. PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases. Nucleic Acids Res. 24:1996;3546-3551.
9. Hampsey D.M., Das G., Sherman F. Amino acid replacements in yeast iso-1-cytochrome c. J. Biol. Chem. 261:1986;3259-3271.
10. Inoue S., Hirohoshi T., Matsubara H., Yamanaka T. Complete amino acid sequences of two isocytchromes c of the housefly, Musca domestica L. and their developmental variation in different tissues. Biochim. Biophys. Acta. 790:1984;188-195.
11. Jacob M., Gallinaro H. The 5′ splice site: phylogenetic evolution and variable geometry of association with U1 RNA. Nucleic Acids Res. 17:1989;2159-2180.
12. Keller E.B., Noon W.A. Intron splicing: a conserved internal signal in introns of Drosophila pre-mRNAs. Nucleic Acids Res. 13:1985;4971-4981.
13. Kemmerer E.C., Lei M., Wu R. Isolation and molecular evolutionary analysis of a cytochrome c gene from Oryza sative (Rice). Mol. Biol. Evol. 8:1991;212-226.
14. Limbach K.J., Wu R. Characterization of two Drosophila melanogaster cytochrome c genes and their transcripts. Nucleic Acids Res. 13:1985;631-644.
15. Montgomery D.L., Leung D.W., Smith M., Shalit P., Faye G., Hall B.D. Isolation and sequence of the gene for iso-2-cytochrome c in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA. 77:1980;541-545.
16. Moore G.R., Pettigrew G.W. Cytochromes c: Evolutionary, Structural and Physiochemical Aspects. 1990;Springer, Berlin.
17. Moriyama E.N., Powell J.R. Intraspecific nuclear DNA variation in Drosophila. Mol. Biol. Evol. 13:1996;261-277.
18. Newman W.A. Origin of the Maxillopoda. Acta Zool. 73:1992;319-322.
19. Osheroff N., Speck S.H., Margoliash E., Veerman E.C.I., Wilms J., Konig B.W., Muijsers A.O. The reaction of primate cytochrome c with cytochrome c oxidase. J. Biol. Chem. 258:1983;5731-5738.
20. Palumbi S.R., Baker C.S. Contrasting population structure from nuclear intron sequences and mtDNA of humpback whales. Mol. Biol. Evol. 11:1994;426-435.
21. Rozas J., Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics. 15:1999;174-175.
22. Skulachev V.P. Cytochrome c in the apoptotic and antioxidant cascades. FEBS Lett. 423:1998;275-280.
23. Spears T., Abele L.G. Crustacean phylogeny inferred from 18S rDNA. Fortey R.A., Thomas R.H. Systematics Association Special Volume Series 55. 1997;Chapman and Hall, London.
24. Swanson M.S., Zieminn S.M., Miller D.D., Garber E.A.E., Margoliash E. Developmental expression of nuclear genes that encode mitochondrial proteins: insect cytochromes c. Proc. Natl. Acad. Sci. USA. 82:1985;1964-1968.
25. Swofford D.L. PAUP: Phylogenetic Analysis Using Parsimony, version 3.1. 1993;Illinois Natural History Survey, Champaign.
26. Virbasius J.V., Scarpulla R.C. Structure and expression of rodent genes encoding the testis-specific cytochrome c. J. Biol. Chem. 263:1988;6791-6796.