-
1
-
-
0030861915
-
DNA glycosylases in the base excision repair of DNA
-
PID: 9224623, COI: 1:CAS:528:DyaK2sXksFCju7s%3D
-
Krokan HE, Standal R, Slupphaug G: DNA glycosylases in the base excision repair of DNA. Biochem J. 1997, 325: 1-16. DOI: 10.1042/bj3250001
-
(1997)
Biochem J
, vol.325
, pp. 1-16
-
-
Krokan, H.E.1
Standal, R.2
Slupphaug, G.3
-
3
-
-
0028959237
-
The structural basis of specific base-excision repair by uracil-DNA glycosylase
-
PID: 7845459, COI: 1:CAS:528:DyaK2MXjs1Wnsr4%3D
-
Savva R, McAuley-Hecht K, Brown T, Pearl L: The structural basis of specific base-excision repair by uracil-DNA glycosylase. Nature. 1995, 373: 487-493. 10.1038/373487a0. DOI: 10.1038/373487a0
-
(1995)
Nature
, vol.373
, pp. 487-493
-
-
Savva, R.1
McAuley-Hecht, K.2
Brown, T.3
Pearl, L.4
-
4
-
-
0028934537
-
Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis
-
PID: 7697717, COI: 1:CAS:528:DyaK2MXkslOmtbs%3D
-
Mol CD, Arvai AS, Slupphaug G, Kavli B, Alseth I, Krokan HE, Tainer JA: Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis. Cell. 1995, 80: 869-878. 10.1016/0092-8674(95)90290-2. DOI: 10.1016/0092-8674(95)90290-2
-
(1995)
Cell
, vol.80
, pp. 869-878
-
-
Mol, C.D.1
Arvai, A.S.2
Slupphaug, G.3
Kavli, B.4
Alseth, I.5
Krokan, H.E.6
Tainer, J.A.7
-
5
-
-
0032498302
-
Crystal structure of a G:T/U mismatch-specific DNA glycosylase: mismatch recognition by complementary-strand interactions
-
PID: 9489705, COI: 1:CAS:528:DyaK1cXlt1yjuw%3D%3D
-
Barrett TE, Savva R, Panayotou G, Barlow T, Brown T, Jiricny J, Pearl LH: Crystal structure of a G:T/U mismatch-specific DNA glycosylase: mismatch recognition by complementary-strand interactions. Cell. 1998, 92: 117-129. 10.1016/S0092-8674(00)80904-6. DOI: 10.1016/S0092-8674(00)80904-6
-
(1998)
Cell
, vol.92
, pp. 117-129
-
-
Barrett, T.E.1
Savva, R.2
Panayotou, G.3
Barlow, T.4
Brown, T.5
Jiricny, J.6
Pearl, L.H.7
-
6
-
-
0029805081
-
A new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase
-
PID: 8878487, COI: 1:CAS:528:DyaK28XmsVGns70%3D
-
Gallinari P, Jiricny J: A new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase. Nature. 1996, 383: 735-738. 10.1038/383735a0. DOI: 10.1038/383735a0
-
(1996)
Nature
, vol.383
, pp. 735-738
-
-
Gallinari, P.1
Jiricny, J.2
-
7
-
-
0034705405
-
Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus
-
PID: 10777501, COI: 1:CAS:528:DC%2BD3cXksVGku74%3D
-
Sandigursky M, Franklin WA: Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus. J Biol Chem. 2000, 275: 19146-19149. 10.1074/jbc.M001995200. DOI: 10.1074/jbc.M001995200
-
(2000)
J Biol Chem
, vol.275
, pp. 19146-19149
-
-
Sandigursky, M.1
Franklin, W.A.2
-
8
-
-
0033587149
-
Thermostable uracil-DNA glycosylase from Thermotoga maritima, a member of a novel class of DNA repair enzymes
-
PID: 10339434, COI: 1:CAS:528:DyaK1MXjsVymt74%3D
-
Sandigursky M, Franklin WA: Thermostable uracil-DNA glycosylase from Thermotoga maritima, a member of a novel class of DNA repair enzymes. Curr Biol. 1999, 9: 531-534. 10.1016/S0960-9822(99)80237-1. DOI: 10.1016/S0960-9822(99)80237-1
-
(1999)
Curr Biol
, vol.9
, pp. 531-534
-
-
Sandigursky, M.1
Franklin, W.A.2
-
9
-
-
0033602148
-
Identification of a new uracil-DNA glycosylase family by expression cloning using synthetic inhibitors
-
PID: 10074426, COI: 1:CAS:528:DyaK1MXhsFyrsb4%3D
-
Haushalter KA, Todd Stukenberg MW, Kirschner MW, Verdine GL: Identification of a new uracil-DNA glycosylase family by expression cloning using synthetic inhibitors. Curr Biol. 1999, 9: 174-185. 10.1016/S0960-9822(99)80087-6. DOI: 10.1016/S0960-9822(99)80087-6
-
(1999)
Curr Biol
, vol.9
, pp. 174-185
-
-
Haushalter, K.A.1
Todd Stukenberg, M.W.2
Kirschner, M.W.3
Verdine, G.L.4
-
10
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
PID: 9254694, COI: 1:CAS:528:DyaK2sXlvFyhu7w%3D
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25: 3389-3402. 10.1093/nar/25.17.3389. DOI: 10.1093/nar/25.17.3389
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
11
-
-
0032167424
-
Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA
-
PID: 9724657, COI: 1:CAS:528:DyaK1cXmt1Ghu7s%3D
-
Parikh SS, Mol CD, Slupphaug G, Bharati S, Krokan HE, Tainer JA: Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA. EMBO J. 1998, 17: 5214-5226. 10.1093/emboj/17.17.5214. DOI: 10.1093/emboj/17.17.5214
-
(1998)
EMBO J
, vol.17
, pp. 5214-5226
-
-
Parikh, S.S.1
Mol, C.D.2
Slupphaug, G.3
Bharati, S.4
Krokan, H.E.5
Tainer, J.A.6
-
12
-
-
0028604549
-
Unified catalytic mechanism for DNA glycosylases
-
PID: 7806489, COI: 1:CAS:528:DyaK2cXmvFGls7k%3D
-
Dodson ML, Michaels ML, Lloyd RS: Unified catalytic mechanism for DNA glycosylases. J Biol Chem. 1994, 269: 32709-32712.
-
(1994)
J Biol Chem
, vol.269
, pp. 32709-32712
-
-
Dodson, M.L.1
Michaels, M.L.2
Lloyd, R.S.3
-
13
-
-
0033554395
-
Heteronuclear NMR and crystallographic studies of wild-type and H187Q Escherichia coliuracil DNA glycosylase: electrophilic catalysis of uracil expulsion by a neutral histidine 187
-
PID: 10508390, COI: 1:CAS:528:DyaK1MXlt12rtLg%3D
-
Drohat AC, Xiao G, Tordova M, Jagadeesh J, Pankiewicz KW, Watanabe KA, Gilliland GL, Stivers JT: Heteronuclear NMR and crystallographic studies of wild-type and H187Q Escherichia coli uracil DNA glycosylase: electrophilic catalysis of uracil expulsion by a neutral histidine 187. Biochemistry. 1999, 38: 11876-11886. 10.1021/bi9910880. DOI: 10.1021/bi9910880
-
(1999)
Biochemistry
, vol.38
, pp. 11876-11886
-
-
Drohat, A.C.1
Xiao, G.2
Tordova, M.3
Jagadeesh, J.4
Pankiewicz, K.W.5
Watanabe, K.A.6
Gilliland, G.L.7
Stivers, J.T.8
-
14
-
-
0033554424
-
Role of electrophilic and general base catalysis in the mechanism of Escherichia coliuracil DNA glycosylase
-
PID: 10508389, COI: 1:CAS:528:DyaK1MXlslOhurs%3D
-
Drohat AC, Jagadeesh J, Ferguson E, Stivers JT: Role of electrophilic and general base catalysis in the mechanism of Escherichia coli uracil DNA glycosylase. Biochemistry. 1999, 38: 11866-11875. 10.1021/bi9910878. DOI: 10.1021/bi9910878
-
(1999)
Biochemistry
, vol.38
, pp. 11866-11875
-
-
Drohat, A.C.1
Jagadeesh, J.2
Ferguson, E.3
Stivers, J.T.4
-
15
-
-
0032555065
-
3,N4-ethenocytosine, a highly mutagenic adduct, is a primary substrate for Escherichia colidouble-stranded uracil-DNA glycosylase and human mismatch-specific thymine-DNA glycosylase
-
PID: 9671708, COI: 1:CAS:528:DyaK1cXkvFamurc%3D
-
Saparbaev M, Laval J: 3,N4-ethenocytosine, a highly mutagenic adduct, is a primary substrate for Escherichia coli double-stranded uracil-DNA glycosylase and human mismatch-specific thymine-DNA glycosylase. Proc Natl Acad Sci USA. 1998, 95: 8508-8513. 10.1073/pnas.95.15.8508. DOI: 10.1073/pnas.95.15.8508
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 8508-8513
-
-
Saparbaev, M.1
Laval, J.2
-
16
-
-
0030035663
-
Excision of cytosine and thymine from DNA by mutants of human uracil-DNA glycosylase
-
PID: 8670846, COI: 1:CAS:528:DyaK28XkslOjtrk%3D
-
Kavli B, Slupphaug G, Mol CD, Arvai AS, Peterson SB, Tainer JA, Krokan HE: Excision of cytosine and thymine from DNA by mutants of human uracil-DNA glycosylase. EMBO J. 1996, 15: 3442-3447.
-
(1996)
EMBO J
, vol.15
, pp. 3442-3447
-
-
Kavli, B.1
Slupphaug, G.2
Mol, C.D.3
Arvai, A.S.4
Peterson, S.B.5
Tainer, J.A.6
Krokan, H.E.7
-
17
-
-
0033529945
-
A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil
-
PID: 10430892, COI: 1:CAS:528:DyaK1MXltVeqt7o%3D
-
Greagg MA, Fogg MJ, Panayotou G, Evans SJ, Connolly BA, Pearl LH: A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil. Proc Natl Acad Sci USA. 1999, 96: 9045-9050. 10.1073/pnas.96.16.9045. DOI: 10.1073/pnas.96.16.9045
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 9045-9050
-
-
Greagg, M.A.1
Fogg, M.J.2
Panayotou, G.3
Evans, S.J.4
Connolly, B.A.5
Pearl, L.H.6
-
18
-
-
0033105094
-
Conserved domains in DNA repair proteins and evolution of repair systems
-
PID: 9973609, COI: 1:CAS:528:DyaK1MXhslWjtrg%3D
-
Aravind L, Walker DR, Koonin EV: Conserved domains in DNA repair proteins and evolution of repair systems. Nucleic Acids Res. 1999, 27: 1223-1242. 10.1093/nar/27.5.1223. DOI: 10.1093/nar/27.5.1223
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1223-1242
-
-
Aravind, L.1
Walker, D.R.2
Koonin, E.V.3
-
19
-
-
0032190230
-
AT-hook motifs identified in a wide variety of DNA-binding proteins
-
PID: 9742243, COI: 1:CAS:528:DyaK1cXmslygs7k%3D
-
Aravind L, Landsman D: AT-hook motifs identified in a wide variety of DNA-binding proteins. Nucleic Acids Res. 1998, 26: 4413-4421. 10.1093/nar/26.19.4413. DOI: 10.1093/nar/26.19.4413
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 4413-4421
-
-
Aravind, L.1
Landsman, D.2
-
21
-
-
0031743421
-
Profile hidden Markov models
-
PID: 9918945, COI: 1:CAS:528:DyaK1MXktlCmtQ%3D%3D
-
Eddy SR: Profile hidden Markov models. Bioinformatics. 1998, 14: 755-763. 10.1093/bioinformatics/14.9.755. DOI: 10.1093/bioinformatics/14.9.755
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
-
22
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
PID: 7984417, COI: 1:CAS:528:DyaK2MXitlSgu74%3D
-
Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22: 4673-4680. DOI: 10.1093/nar/22.22.4673
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
23
-
-
0026100921
-
A workbench for multiple alignment construction and analysis
-
PID: 2006136, COI: 1:CAS:528:DyaK3MXmtVShtbs%3D
-
Schuler GD, Altschul SF, Lipman DJ: A workbench for multiple alignment construction and analysis. Proteins. 1991, 9: 180-190. DOI: 10.1002/prot.340090304
-
(1991)
Proteins
, vol.9
, pp. 180-190
-
-
Schuler, G.D.1
Altschul, S.F.2
Lipman, D.J.3
-
24
-
-
0029144601
-
Gibbs motif sampling: detection of bacterial outer membrane protein repeats
-
PID: 8520488, COI: 1:CAS:528:DyaK2MXnvVyjsLg%3D
-
Neuwald AF, Liu JS, Lawrence CE: Gibbs motif sampling: detection of bacterial outer membrane protein repeats. Protein Sci. 1995, 4: 1618-1632. DOI: 10.1002/pro.5560040820
-
(1995)
Protein Sci
, vol.4
, pp. 1618-1632
-
-
Neuwald, A.F.1
Liu, J.S.2
Lawrence, C.E.3
-
25
-
-
0031473847
-
SWISS-MODEL and the Swiss-Pdb-Viewer: an environment for comparative protein modeling
-
PID: 9504803, COI: 1:CAS:528:DyaK1cXhvFaks70%3D
-
Guex N, Peitsch MC: SWISS-MODEL and the Swiss-Pdb-Viewer: an environment for comparative protein modeling. Electrophoresis. 1997, 18: 2714-2723. DOI: 10.1002/elps.1150181505
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
|