Prediction whether a human cDNA sequence contains initiation codon by combining statistical information and similarity with protein sequences

Bioinformatics

Volumn 16, Issue 11, 2000, Pages 960-967

  Nishikawa, Tetsuo ^a,b   Ota, Toshio ^a,c   Isogai, Takao ^a  

^a Helix Research Institute   (Japan)

^b HITACHI LTD   (Japan)

^c KYOWA HAKKO KOGYO CO LTD   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BRAIN NATRIURETIC PEPTIDE; COMPLEMENTARY DNA; DNA FRAGMENT; PROTEIN;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GENE CLUSTER; HUMAN; INFORMATION; NUCLEOTIDE SEQUENCE; PREDICTION; PRIORITY JOURNAL; SCORING SYSTEM; SENSITIVITY AND SPECIFICITY; START CODON; STATISTICAL ANALYSIS;

EID: 0034521884     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.11.960     Document Type: Article

References (6)

1. Generation and analysis of 280 000 human expressed sequence tags
2. Oligo-capping: A simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides
3. Assessing protein coding region integrity in cDNA sequencing projects
4. Database of homology-derived protein structures and the structural meaning of sequence alignment
5. Pieces of the puzzle: Expressed sequence tags and the catalog of human genes
6. Inferring gene structures in genomeic sequences using pattern recognition and expressed sequence tags