RAPD analysis of Nectomys squamipes (Rodentia, Sigmodontinae) populations

Genetics and Molecular Biology

Volumn 23, Issue 4, 2000, Pages 793-797

  Almeida, Francisca C ^a,b   Moreira, Miguel A M ^a   Bonvicino, Cibele R ^a   Cerqueira, Rui ^b  

^a Instituto de Cancer   (Brazil)

^b FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

PRIMER DNA;

ARTICLE; CLUSTER ANALYSIS; CONTROLLED STUDY; DNA DETERMINATION; GENE STRUCTURE; GENETIC DISTANCE; GENETIC POLYMORPHISM; GEOGRAPHIC DISTRIBUTION; HYPOTHESIS; MARKER GENE; MORPHOMETRICS; NECTOMYS SQUAMIPES; NONHUMAN; RANDOM AMPLIFIED POLYMORPHIC DNA; RAT; RODENT; SCORING SYSTEM; SIGMODONTINAE;

NECTOMYS SQUAMIPES; RODENTIA; SIGMODONTINAE;

EID: 0034432278     PISSN: 14154757     EISSN: None     Source Type: Journal    
DOI: 10.1590/S1415-47572000000400014     Document Type: Article

References (26)

1. Baruffi, L., Damiani, G, Guglielmino, C.R., Bandis, C., Malacrida, A.R. and Gasperi, G. (1995). Polymorphism within and between populations of Ceratitis capitata: comparison between RAPD and multilocus enzyme electrophoresis data. Heredity 74: 425-437.
2. Bonvicino, C.R. (1994). Especiação do rato d'água Nectomys. Abordagem cariológica, morfológica e geográfica. PhD thesis, Universidade Federal do Rio de Janeiro, Rio de Janeiro.
3. Bonvicino, C.R., D'Andrea, P.S., Cerqueira, R. and Seuánez, H.N. (1996). The chromosomes of Nectomys (Rodentia, Cricetidae) with 2n = 52, 2n = 56, and interspecific hybrids (2n = 54). Cytogenet. Cell Genet. 73: 190-193.
4. D'Andrea, P.S., Horta, C., Cerqueira, R. and Rey, L. (1996). Breeding of the water rat Nectomys squamipes in the laboratory. Lab. Anim. 30: 369-376.
5. Ernest, K.A. and Mares, M.A. (1986). Ecology of Nectomys squamipes, the neotropical water rat, in central Brazil: home range, habitat selection, reproduction and behaviour. J. Zool. 210: 599-612.
6. Excoffier, L., Smouse, P.E. and Quattro, J.M. ( 1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:419-491.
7. Gilbert, A.D., Lelunan, N., O'Brien, S J. and Wayne, R.K. ( 1990). Genetic fingerprinting reflects population differentiation in the California Channel Island fox. Nature 344:764-767.
8. Haig, S.M., Bowman, R. and Mullins, T.D. (1996). Population structure of red-cockaded woodpeckers in south Florida: RAPDs revisited. Mol. Ecol. 5: 725-734.
9. Kumar, S., Tamura, K. and Nei, M. (1993). MEGA: Molecular Evolutionary Genetics Analysis, Version 1.02. The Pennsylvania State Univer-sity, University Park, PA.
10. Lynch, M. and Milligan, B.G. ( 1994). Analysis of population genetic structure with RAPD markers. Mol Ecol 3:91 -99.
11. Maia, V., Yonenaga-Yassuda, Y., Freitas, T.R.O., Kasahara, S., SuñéMattevi, M., Oliveira, L.F., Galindo, M.A. and Sbalqueiro, IJ. (1984). Supernumerary chromosomes in Neciomys squamipes (Cricetidae-Rodentia). Genética 63:121-128.
12. Maruyama, T. and Kimura, M. (1980). Genetic variability and effective population size when local extinction and recolonization of subpopulation are frequent. Proc. Natl. Acad. Sci. 77: 6710-6714.
13. Musser, G.G. and Carleton, M.D. (1993). Family Muridae. In: Mammal Species of the World (Wilson, D.E. and Reeder, D.M., eds.). 2nd edn. Smithsonian Institution, Washington, pp. 501-753.
14. Nusser, J.A., Goto, R.M., Ledig, D.B., Fleischer, R.C. and Miller, M.M. (1996). RAPD analysis reveals low genetic variability in the endangered light-footed clapper rail. Mol. Ecol. 5: 463-472.
15. Rey, L. (1993). Non-human vertebrate hosts of Schistosoma mansoni and schistosomiasis transmission in Brazil. Res. Rev. Parasitol. 53:13-25.
16. Rohlf, F.J. (1993). NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System. Exeter Software, New York.
17. Sambrook, J., Fritsch, E.F. and Maniatis,T.(1989). Molecular Cloning: A Laboratory Manual. 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
18. Sinclair, E.A.,Webb, N.J., Marchant, A.D. and Tidemann, C.R. (1996). Genetic variation in the little red flying-fox Pteropus scaputatus (Chiroptera: Pteropodidae) implications for management. Biol. Conserv. 76:45-50.
19. Slatkin, M. (1987). Gene flow and the geographic structure of natural populations. Science 236:787-792.
20. Slatkin, M. (1993). Isolation by distance in equilibrium and non-equilibrium populations. Evolution 47: 264-279.
21. Smith, L J., Braylan, R.C., Nutkis, J.E., Edmundson, K.B., Downing, J.R. and Wakeland, E.K. (1987). Extraction of cellular DNA from human cells and tissues fixed with ethanol. Anal. Biochem. 160: 135-138.
22. Stott, W., Ihssen, RE. and White, B.N. (1997). Inheritance of RAPD molecular markers in lake trout Salvelinus namaycush. Mol Ecol. 6:609-613.
23. Welsh, J. and McClelland, M. ( 1990). Fingerprint genomes using PCR with arbitrary primers. Nucleic Acids Res. 18: 7213-7218.
24. Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A. and Tingey, S.V. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18: 6531-6535.
25. Wright, S. ( 1951 ). The genetical structure of populations. Ann. Eugen. 15: 323-335.
26. Yonenaga-Yassuda, Y., Maia, V. and L'Abbate, M. (1987). Two tandem fusions and supernumerary chromosomes in Nectomys squamipes (Cricetidae, Rodentia). Caryologia 41:25-39.