Assessment of genetic diversity using RAPD analysis in a germplasm collection of sea buckthorn

Agricultural and Food Science in Finland

Volumn 9, Issue 4, 2000, Pages 279-289

  Bartish, Galyna I ^a,b   Jeppsson, Niklas ^a   Bartish, Igor V ^a,c   Nybom, Hilde ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^b SÖDERTÖRN UNIVERSITY   (Sweden)

^c INSTITUTE OF MATHEMATICS   (Czech Republic)

Author keywords

Core collection; Genetic diversity; Hippophae rhamnoides; Hybridization; RAPD; Sea buckthorn

Indexed keywords

HIPPOPHAE RHAMNOIDES; RHAMNACEAE;

EID: 0034355339     PISSN: 12390992     EISSN: None     Source Type: Journal    
DOI: 10.23986/afsci.5669     Document Type: Article

References (31)

1. Alston, F.H. & Spiegel-Roy, P. 1985. Fruit tree breeding: strategies, achievements and constraints. In: Cannel, M.G.R. & Jackson, J.E. (eds.). Attributes of trees as crop plants. Institute of Terrestrial Ecology, Huntingdon, UK. p. 49-67.
2. Bartish, I.V., Jeppsson, N., Bartish, G.I., Lu, R. & Nybom, H. 2000. Inter-and intraspecific genetic variation in Hippophae (Elaeagnaceae) investigated by RAPD markers. Plant Systematics and Evolution 225 (in press).
3. -, Jeppsson, N. & Nybom, H. 1999a. Population genetic structure in the dioecious pioneer plant species Hippophae rhamnoides investigated by random amplified polymorphic DNA (RAPD) markers. Molecular Ecology 8: 791-802.
4. -, Rumpunen, K. & Nybom, H. 1999b. Genetic diversity in Chaenomeles (Rosaceae) revealed by RAPD analysis. Plant Systematics and Evolution 214: 131-145.
5. Brown, A.H.D. 1989. Core collections: a practical approach to genetic resources management. Genome 31: 818-824.
6. Burmistrov, L.A. 1995. Genetic resources and breeding potential of sea buckthorn (Hippophae rhamnoides) in Russia. WANATCA Yearbook 19: 9-13.
7. Cardoso, M.A., Provan, J., Powell, W., Ferreiras, P.C.G. & De Oliveira, D.E. 1998. High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae-Caesalpinoideae). Molecular Ecology 7: 601-608.
8. Chalmers, K.J., Waugh, R., Sprent, J.I., Simons, A.J. & Powell, W. 1992. Detection of genetic variation between and within populations of Gliricidia sepium and G. maculata using RAPD markers. Heredity 69: 465-472.
9. Degani, C., Rowland, L.J., Levi, A., Hortynski, J.A. & Galletta, G.J. 1998. DNA fingerprinting of strawberry (Fragaria x ananassa) cultivars using randomly amplified polymorphic DNA (RAPD) markers. Euphytica 102: 247-253.
10. Excoffier, L., Smouse, P.E. & Quattro, J.M. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
11. Garcia, E., Jamilena, M., Alvarez, J.I., Arnedo, T., Oliver, J.L. & Lozano, R. 1998. Genetic relationships among melon breeding lines revealed by RAPD markers and agronomic traits. Theoretical and Applied Genetics 96: 878-885.
12. Gepts, P. 1995. Genetic markers and core collections. In: Hodgkin, T. et al. (eds.). Core collections of plant genetic resources. John Wiley & Sons, Chichester, UK. p. 127-146.
13. Gillies, A.C.M., Cornelius, J.P., Newton, A.C., Navarro, C., Hernández, M. & Wilson, J. 1997. Genetic variation in Costa Rican populations of the tropical timber species Cedrela odorata L., assessed using RAPDs. Molecular Ecology 6: 1133-1145.
14. Graham, J., McNicol, R.J. & McNicol, J.W. 1996. A comparison of methods for estimation of genetic diversity in strawberry cultivars. Theoretical and Applied Genetics 93: 402-406.
15. Hancock, J.F., Callow, P.A. & Shaw, D.V. 1994. Randomly amplified polymorphic DNAs in the cultivated strawberry (Fragaria x ananassa). Journal of the American Society of Horticultural Science 118: 862-864.
16. Hokanson, S.C., Szewc-McFadden, A.K., Lamboy, W.F. & McFerson, J.R. 1998. Microsatellite (SSR) markers reveal genetic identities, genetic diversity and relationships in a Malus x domestica Borkh. core subset collection. Theoretical and Applied Genetics 97: 671-683.
17. Hormaza, J.I., Dollo, L. & Polito, V.S. 1994. Determination of relatedness and geographical movements of Pistacia vera (Pistachio; Anacardiaceae) germplasm by RAPD analysis. Economic Botany 48: 349-358.
18. Huff, D.R., Peakall, R. & Smouse, P.E. 1993. RAPD variation within and among natural population of outcrossing buffalograss (Buchloe dactyloides (Nutt.) Engelm.). Theoretical and Applied Genetics 86: 927-934.
19. Kalinina, I.P. & Panteleyeva, Y.I. 1987. Breeding of sea bucktorn in the Altaj. In: Hryukov, A.B. (ed.). Advances in agricultural science. Moscow. p. 76-87.
20. Mikheyev, A.M. & Demenko, V.I. 1990. Oblepiha. Rosagropromizdat. Moscow.
21. Persson, H.A. & Nybom, H. 1999. Genetic sex determination and RAPD marker segregation in the dioecious species sea buckthorn (Hippophae rhamnoides L.). Hereditas 129: 45-51.
22. Rohlf, F.J. 1997. NTSYS-pc. Numerical taxonomy and multivariate analysis system, version 1.80. Exeter Software, Setauket, NY.
23. Rossetto, M., Weaver, P.K. & Dixon, K.W. 1995. Use of the RAPD analysis in devising conservation strategies for the rare and endangered Grevillea scapigera (Proteaceae). Molecular Ecology 4: 321-329.
24. Rousi, A. 1971. The genus Hippophae L. A taxonomic study. Annales Botanici Fennici 8: 177-227.
25. Russell, J.R., Hosein, F., Johnson, E., Waugh, R. & Powell, W. 1993. Genetic differentiation of cocoa (Theobroma cacao L.) populations revealed by RAPD analysis. Molecular Ecology 2: 89-97.
26. Sydes, M.A. & Peakall, R. 1998. Extensive clonality in the endangered shrub Haloragodendron lucasii (Haloragaceae) revealed by allozymes and RAPDs. Molecular Ecology 7: 87-93.
27. Tenkouano, A., Crouch, J.H., Crouch, H.K., Vuylsteke, D. & Ortiz, R. 1999. Comparison of DNA marker and pedigree-based methods of genetic analysis of plantain and banana (Musa spp.) clones. I. Estimation of genetic relationships. Theoretical and Applied Genetics 98: 62-68.
28. Tivang, J., Skroch, P. & Nienhuis, J. 1996. Randomly amplified polymorphic DNA (RAPD) variation among and within artichoke (Cynara scolymus L.) cultivars and breeding populations. Journal of the American Society of Horticultural Science 121: 783-788.
29. Trajkovski, V. & Jeppsson, N. 1999. Domestication of sea buckthorn. Botanica Lithuanica, suppl. 2: 37-46.
30. Virk, P.S., Zhu, J., Newbury, H.J., Bryan, G.J., Jackson, M.T. & Ford-Lloyd, B.V. 2000. Effectiveness of different classes of molecular marker for classifying and revealing variation in rice (Oryza sativa) germplasm. Euphytica 112: 275-284.
31. Weising, K., Nybom, H., Wolff, K. & Meyer, W. 1994. DNA fingerprinting in plants and fungi. CRC Press, Boca Raton, FL.