First comprehensive low-density horse linkage map based on two 3- generation, full-sibling, cross-bred horse reference families

Genomics

Volumn 66, Issue 2, 2000, Pages 123-134

  Swinburne, June ^a   Gerstenberg, Cornelia ^b   Breen, Matthew ^a   Aldridge, Victoria ^a   Lockhart, Lesley ^a   Marti, Eliane ^c   Antczak, Doug ^d   Eggleston Stott, Marcia ^e   Bailey, Ernie ^f   Mickelson, Jim ^g   Røed, Knut ^h   Lindgren, Gabriella ⁱ   Von Haeringen, Wim ^j   Guérin, Gérard ^k   Bjarnason, Jon ^l   Allen, Twink ^b,m   Binns, Matthew ^a  

^a ANIMAL HEALTH TRUST   (United Kingdom)

^b TBA Equine Fertility Unit   (United Kingdom)

^c UNIVERSITY OF BERN   (Switzerland)

^d Cornell University ^*  (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f UNIVERSITY OF KENTUCKY   (United States)

^g UNIVERSITY OF MINNESOTA   (United States)

^h NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

ⁱ UPPSALA UNIVERSITY   (Sweden)

^j WAGENINGEN UNIVERSITY   (Netherlands)

^k CEMAGREF   (France)

^l Holar I Hjaltadal   (Iceland)

^m UNIVERSITY OF CAMBRIDGE   (United Kingdom)

more..

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOSOME; CROSS BREEDING; EMBRYO; FAMILY; GENE MAPPING; GENETIC LINKAGE; GENOTYPE; HORSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SIBLING; X CHROMOSOME;

ANIMALIA; EQUIDAE; EQUUS CABALLUS; MAMMALIA;

EID: 0034210674     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.2000.6207     Document Type: Article

References (33)

1. Allen W. R., Bracher V. Videoendoscopic evaluation of the mare's uterus. III. Findings in the pregnant mare. Equine Vet. J. 24:1992;285-291.
2. Allen W. R., Pashen R. L. Production of monozygotic (identical) horse twins by embryo micromanipulation. J. Reprod. Fertil. 71:1984;607-613.
3. Barandese W., Armitage S. M., Kossarek L. M., Shalom A., Kirkpatrick B. W., Ryan A. M., Clayton D., Li L., Neibergs H. L., Zhang N. A genetic linkage map of the bovine genome. Nat. Genet. 6:1994;227-235.
4. Battut I., Colchen S., Fieni F., Tainturier D., Bruyas J. F. Success rates when attempting to nonsurgically collect equine embryos at 144, 156 or 168 hours after ovulation. Equine Vet. J. Suppl. 25:1997;60-62.
5. Betteridge K. J. The structure and function of the equine capsule in relation to embryo manipulation and transfer. Equine Vet. J. Suppl. 8:1989;92-100.
6. Bowling A. T., Millon L. V., Dileanis S. Physical mapping of genetic markers to chromosome 30 using a trisomic horse and evidence for maternal origin of the extra chromosome. Chromosome Res. 5:1997a;429-431.
7. Bowling A. T., Breen M., Chowdhary B. P., Hirota K., Lear T., Millon L. V., Ponce de Leon F. A., Raudsepp T., Stranzinger G. International system for cytogenetics nomenclature of the domestic horse. Chromosome Res. 5:1997b;433-443.
8. Breen M., Lindgren G., Binns M. M., Norman J., Irvin Z., Bell K., Sandberg K., Ellegren H. Genetical and physical assignments of equine microsatellites - First integration of anchored markers in horse genome mapping. Mamm. Genome. 8:1997;267-273.
9. Copeland N. G., Jenkins N. A., Gilbert D. J., Eppig J. T., Maltais L. J., Miller J. C., Dietrich W. F., Weaver A., Lincoln S. E., Steen R. G. A genetic linkage map of the mouse: Current applications and future prospects. Science. 262:1993;57-66.
10. Dausset J., Cann H., Cohen D., Lathrop M., Lalouel J-M., White R. Centre d'Etude du Polymorphisme Humain (CEPH): Collaborative genetic mapping of the human genome. Genomics. 6:1990;575-577.
11. Dietrich W. F., Miller J. C., Steen R. G., Merchant M., Damron D., Nahf R., Gross A., Joyce D. C., Wessel M., Dredge R. D. A genetic map of the mouse with 4,006 simple sequence length polymorphisms. Nat. Genet. 7:1994;220-245.
12. Ellegren H., Johansson M., Sandberg K., Andersson L. Cloning of highly polymorphic microsatellites in the horse. Anim. Genet. 23:1992;133-142.
13. Fraser D. G., Bailey E. Demonstration of three DRB loci in a domestic horse family. Immunogenetics. 44:1996;441-445.
14. Godard S., Vaiman D., Oustry A., Nocart M., Bertaud M., Guzylack S., Meriaux J. C., Cribiu E. P., Guérin G. Characterisation, genetic and physical mapping analysis of 36 horse plasmid and cosmid-derived microsatellites. Mamm. Genome. 8:1997;745-750.
15. Guérin G., Bailey E., Bernoco D., Anderson I., Antczak D. F., Bell K., Binns M. M., Bowling A. T., Brandon R., Cholewinski G., Cothran E. G., Ellegren H., Förster M., Godard S., Horin P., Ketchum M., Lindgren G., McPartlan H., Mériaux J. C., Mickelson J. R., Millon L. V., Murray J., Neau A., Røed K., Sandberg K., Shiue Y-L., Skow L. C., Stott M., Swinburne J. E., Valberg S. J., Van Haeringen H., Van Haeringen W. A., Ziegle J. Report of the International Equine Gene Mapping Workshop: Male linkage map. Anim. Genet. 30:1999;341-354.
16. Haldane J. B. S. Sex ration and unisexual sterility in hybrid animals. J. Genet. 12:1922;101-109.
17. Hopman T. J., Han E. B., Story M. R., Schug M. D., Aquadro C. F., Bowling A. T., Murray J. D., Caetano A. R., Antczak D. F. Equine dinucleotide repeat loci COR001-COR020. Anim. Genet. 30:1999;225-226.
18. Lindgren G., Sandberg K., Persson H., Marklund S., Breen M., Sandgren B., Carlsten J., Ellegren H. A primary male autosomal linkage map of the horse genome. Genome Res. 8:1998;951-966.
19. Lindgren, G, Breen, M, Swinburne, J. E, Mariat, D, Sandberg, K, Guérin, G, Ellegren, H, and, Binns, M. M. Anchoring equine linkage groups by FISH mapping BAC clones containing microsatellite markers. Submitted for publication.
20. Lyons L. A., Laughlin T. F., Copeland N. G., Jenkins N. A., Womack J. E., O'Brien S. J. Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes. Nat. Genet. 15:1997;47-56.
21. Marklund S., Ellegren H., Eriksson S., Sandberg K., Andersson L. Parentage testing and linkage anaylsis in the horse using a set of highly polymorphic microsatellites. Anim. Genet. 25:1994;19-23.
22. Marklund L., Johansson Moller M., Sandberg K., Andersson L. A missense mutation in the gene for melanocyte-stimulating hormone receptor (MC1R) is associated with the chestnut coat color in horses. Mamm. Genome. 7:1996;895-899.
23. McKinnon A. O., Carnevale E. M., Squires E. L., Carrey N. J., Seidel G. E. Bisection of equine embryos. Equine Vet. J. Suppl. 8:1989;126-128.
24. Murphie A. M., Hopman T. J., Schug M. D., Aquadro C. F., Bowling A. T., Murray J. D., Caetano A. R., Antczak D. F. Equine dinucleotide repeat loci COR021-COR040. Anim. Genet. 30:1999;235-237.
25. Nikiforov T. T., Rendle R. B., Goelet P., Rogers Y. H., Kotewicz M. L., Anderson S., Trainor G. L., Knapp M. R. Genetic bit analysis: A solid phase method for typing single nucleotide polymorphisms. Nucleic Acids Res. 22:1994;4167-4175.
26. Ruth L. S., Hopman T. J., Schug M. D., Aquadro C. F., Bowling A. T., Murray J. D., Caetano A. R., Antczak D. F. Equine dinucleotide repeat loci COR041-COR060. Anim. Genet. 30:1999;320-321.
27. Scott I. S., Long S. E. An examination of chromosomes in the stallion (Equus caballus) during meiosis. Cytogenet. Cell Genet. 26:1980;7-13.
28. Shiue Y-L., Bickel L. A., Caetano A. R., Millon L. V., Clark R. S., Eggleston M. L., Michelmore R., Bailey E., Guérin G., Godard S., Mickelson J. R., Valberg S. J., Murray J. D., Bowling A. T. A synteny map of the horse genome comprised of 240 microsatellite and RAPD markers. Anim. Genet. 30:1999;1-9.
29. Simpson D. J., Greenwood R. E. S., Ricketts S. W., Rossdale P. D., Sanderson M., Allen W. R. Use of ultrasound echography for early diagnosis of single and twin pregnancy in the mare. J. Reprod. Fertil. Suppl. 32:1982;431-439.
30. Skidmore J., Boyle M. S., Cran D., Allen W. R. Micromanipulation of equine embryos to produce monozygotic twins. Equine Vet. J. Suppl. 8:1989;126-128.
31. Swinburne, J. E, Lockhart, L, Aldridge, V, Marti, E, Breen, M, and, Binns, M. M. Characterisation of twenty-five new physically mapped horse microsatellite loci: AHT24-48, Anim. Genet, in press.
32. Tallmadge R. L., Hopman T. J., Schug M. D., Aquadro C. F., Bowling A. T., Murray J. D., Caetano A. R., Antczak D. F. Equine dinucleotide repeat loci COR061-COR080. Anim. Genet. 30:1999a;462-463.
33. Tallmadge R. L., Evans K. G., Hopman T. J., Schug M. D., Aquadro C. F., Bowling A. T., Murray J. D., Caetano A. R., Antczak D. F. Equine dinucleotide repeat loci COR081-COR100. Anim. Genet. 30:1999b;470-471.