메뉴 건너뛰기




Volumn 44, Issue 5, 2000, Pages 411-419

Evaluation of nine sets of PCR primers in the RNA dependent RNA polymerase region for detection and differentiation of members of the family Caliciviridae, Norwalk virus and Sapporo virus

Author keywords

Calicivirus; Norwalk virus; RT PCR; Sapporo virus

Indexed keywords

RNA DIRECTED RNA POLYMERASE;

EID: 0034130389     PISSN: 03855600     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1348-0421.2000.tb02515.x     Document Type: Article
Times cited : (30)

References (39)
  • 1
    • 0028843935 scopus 로고
    • Epidemiologic applications of novel molecular methods to detect and differentiate small round structured viruses (Norwalk-like viruses)
    • Ando, T., Jin, Q., Gentsch, J.R., Monroe, S.S., Noel, J.S., Dowell, S.F., Cicirello, H.G., Kohn, M.A., and Glass, R.I. 1995. Epidemiologic applications of novel molecular methods to detect and differentiate small round structured viruses (Norwalk-like viruses). J. Med. Virol. 47: 145-152.
    • (1995) J. Med. Virol. , vol.47 , pp. 145-152
    • Ando, T.1    Jin, Q.2    Gentsch, J.R.3    Monroe, S.S.4    Noel, J.S.5    Dowell, S.F.6    Cicirello, H.G.7    Kohn, M.A.8    Glass, R.I.9
  • 2
    • 0028935361 scopus 로고
    • Detection and differentiation of antigenically distinct small round-structured viruses (Norwalk-like viruses) by reverse transcription-PCR and southern hybridization
    • Ando, T., Monroe, S.S., Gentsch, J.R., Jin, Q., Lewis, D.C., and Glass, R.I. 1995. Detection and differentiation of antigenically distinct small round-structured viruses (Norwalk-like viruses) by reverse transcription-PCR and Southern hybridization. J. Clin. Microbiol. 33: 64-71.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 64-71
    • Ando, T.1    Monroe, S.S.2    Gentsch, J.R.3    Jin, Q.4    Lewis, D.C.5    Glass, R.I.6
  • 4
    • 0026080821 scopus 로고
    • Relationships among the positive strand and double-strand RNA viruses as viewed through their RNA-dependent RNA polymerases
    • Bruenn, J.A. 1991. Relationships among the positive strand and double-strand RNA viruses as viewed through their RNA-dependent RNA polymerases. Nucleic Acids Res. 19: 217-226.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 217-226
    • Bruenn, J.A.1
  • 5
    • 0028245401 scopus 로고
    • Sequence similarity of human caliciviruses and small round structured viruses
    • Cubitt, W.D., Jiang, X., Wang, J., and Estes, M.K. 1994. Sequence similarity of human caliciviruses and small round structured viruses. J. Med. Virol. 43: 252-258.
    • (1994) J. Med. Virol. , vol.43 , pp. 252-258
    • Cubitt, W.D.1    Jiang, X.2    Wang, J.3    Estes, M.K.4
  • 6
    • 0001371361 scopus 로고
    • Norwalk virus and other enteric caliciviruses
    • Blaser, M.J. et al (eds), Raven Press, New York
    • Estes, M.K., and Hardy, M.E. 1995. Norwalk virus and other enteric caliciviruses. p. 1009-1034. In Blaser, M.J. et al (eds), Infections of the gastrointestinal tract, Raven Press, New York.
    • (1995) Infections of the Gastrointestinal Tract , pp. 1009-1034
    • Estes, M.K.1    Hardy, M.E.2
  • 7
    • 0027370198 scopus 로고
    • Norwalk-like viruses: Demonstration of genomic diversity by polymerase chain reaction
    • Green, J., Norcott, J.P., Lewis, D., Arnold, C., and Brown, D.W. 1993. Norwalk-like viruses: demonstration of genomic diversity by polymerase chain reaction. J. Clin. Microbiol. 31: 3007-3012.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 3007-3012
    • Green, J.1    Norcott, J.P.2    Lewis, D.3    Arnold, C.4    Brown, D.W.5
  • 8
    • 0029591822 scopus 로고
    • Broadly reactive reverse transcriptase polymerase chain reaction for the diagnosis of SRSV-associated gastroenteritis
    • Green, J., Gallimore, C.I., Norcott, J.P., Lewis, D., and Brown, D.W. 1995. Broadly reactive reverse transcriptase polymerase chain reaction for the diagnosis of SRSV-associated gastroenteritis. J. Med. Virol. 47: 392-398.
    • (1995) J. Med. Virol. , vol.47 , pp. 392-398
    • Green, J.1    Gallimore, C.I.2    Norcott, J.P.3    Lewis, D.4    Brown, D.W.5
  • 9
    • 0030919640 scopus 로고    scopus 로고
    • Expression and self-assembly of recombinant capsid protein from the antigenically distinct Hawaii human calicivirus
    • Green, K.Y., Kapikian, A.Z., Valdesuso, J., Sosnovtsev, S., Treanor, J.J., and Lew, J.F. 1997. Expression and self-assembly of recombinant capsid protein from the antigenically distinct Hawaii human calicivirus. J. Clin. Microbiol. 35: 1909-1914.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 1909-1914
    • Green, K.Y.1    Kapikian, A.Z.2    Valdesuso, J.3    Sosnovtsev, S.4    Treanor, J.J.5    Lew, J.F.6
  • 11
    • 0028027148 scopus 로고
    • Human enteric Caliciviridae: A new prevalent small round-structured virus group defined by RNA-dependent RNA polymerase and capsid diversity
    • Green, S.M., Dingle, K.E., Lambden, P.R., Caul, E.O., Ashley, C.R., and Clarke, I.N. 1994. Human enteric Caliciviridae: a new prevalent small round-structured virus group defined by RNA-dependent RNA polymerase and capsid diversity. J. Gen. Virol. 75: 1883-1888.
    • (1994) J. Gen. Virol. , vol.75 , pp. 1883-1888
    • Green, S.M.1    Dingle, K.E.2    Lambden, P.R.3    Caul, E.O.4    Ashley, C.R.5    Clarke, I.N.6
  • 12
    • 0028950542 scopus 로고
    • Polymerase chain reaction detection of small round-structured viruses from two related hospital outbreaks of gastroenteritis using inosine-containing primers
    • Green, S.M., Lambden, P.R., Deng, Y., Lowes, J.A., Lineham, S., Bushell, J., Rogers, J., Caul, E.O., Ashley, C.R., and Clarke, I.N. 1995. Polymerase chain reaction detection of small round-structured viruses from two related hospital outbreaks of gastroenteritis using inosine-containing primers. J. Med. Virol. 45: 197-202.
    • (1995) J. Med. Virol. , vol.45 , pp. 197-202
    • Green, S.M.1    Lambden, P.R.2    Deng, Y.3    Lowes, J.A.4    Lineham, S.5    Bushell, J.6    Rogers, J.7    Caul, E.O.8    Ashley, C.R.9    Clarke, I.N.10
  • 13
    • 0030791520 scopus 로고    scopus 로고
    • Human calicivirus genogroup II capsid sequence diversity revealed by analyses of the prototype Snow Mountain agent
    • Hardy, M.E., Kramer, S.F., Treanor, J.J., and Estes, M.K. 1997. Human calicivirus genogroup II capsid sequence diversity revealed by analyses of the prototype Snow Mountain agent. Arch. Virol. 142: 1469-1479.
    • (1997) Arch. Virol. , vol.142 , pp. 1469-1479
    • Hardy, M.E.1    Kramer, S.F.2    Treanor, J.J.3    Estes, M.K.4
  • 14
    • 0031823882 scopus 로고    scopus 로고
    • Epidemiological study of prevalence of genogroup II human calicivirus (Mexico virus) infections in Japan and Southeast Asia as determined by enzyme-linked immunosorbent assays
    • Honma, S., Nakata, S., Kogawa, K., Numata, K., Yamashita, T., Oseto, M., and Chiba, S. 1998. Epidemiological study of prevalence of genogroup II human calicivirus (Mexico virus) infections in Japan and Southeast Asia as determined by enzyme-linked immunosorbent assays. J. Clin. Microbiol. 36: 2481-2484.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 2481-2484
    • Honma, S.1    Nakata, S.2    Kogawa, K.3    Numata, K.4    Yamashita, T.5    Oseto, M.6    Chiba, S.7
  • 15
    • 0025607294 scopus 로고
    • Norwalk virus genome cloning and characterization
    • Jiang, X., Graham, D.Y., Wang, K.N., and Estes, M.K. 1990. Norwalk virus genome cloning and characterization. Science 250: 1580-1583.
    • (1990) Science , vol.250 , pp. 1580-1583
    • Jiang, X.1    Graham, D.Y.2    Wang, K.N.3    Estes, M.K.4
  • 16
    • 0026760944 scopus 로고
    • Detection of Norwalk virus in stool by polymerase chain reaction
    • Jiang, X., Wang, J., Graham, D.Y., and Estes, M.K. 1992. Detection of Norwalk virus in stool by polymerase chain reaction. J. Clin. Microbiol. 30: 2529-2534.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2529-2534
    • Jiang, X.1    Wang, J.2    Graham, D.Y.3    Estes, M.K.4
  • 17
    • 0026649563 scopus 로고
    • Expression, self-assembly, and antigenicity of the Norwalk virus capsid protein
    • Jiang, X., Wang, M., Graham, D.Y., and Estes, M.K. 1992. Expression, self-assembly, and antigenicity of the Norwalk virus capsid protein. J. Virol. 66: 6527-6532.
    • (1992) J. Virol. , vol.66 , pp. 6527-6532
    • Jiang, X.1    Wang, M.2    Graham, D.Y.3    Estes, M.K.4
  • 18
    • 0027295302 scopus 로고
    • Sequence and genomic organization of Norwalk virus
    • Jiang, X., Wang, M., Wang, K., and Estes, M.K. 1993. Sequence and genomic organization of Norwalk virus. Virology 195: 51-61.
    • (1993) Virology , vol.195 , pp. 51-61
    • Jiang, X.1    Wang, M.2    Wang, K.3    Estes, M.K.4
  • 19
    • 0029057747 scopus 로고
    • Expression, self-assembly, and antigenicity of a Snow Mountain agent-like calicivirus capsid protein
    • Jiang, X., Matson, D.O., Ruiz-Palacios, G.M., Hu. J., Treanor. J., and Pickering, L.K. 1995. Expression, self-assembly, and antigenicity of a Snow Mountain agent-like calicivirus capsid protein. J. Clin. Microbiol. 33: 1452-1455.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 1452-1455
    • Jiang, X.1    Matson, D.O.2    Ruiz-Palacios, G.M.3    Hu, J.4    Treanor, J.5    Pickering, L.K.6
  • 21
    • 0000454136 scopus 로고    scopus 로고
    • Norwalk group of viruses
    • Fields, B.N. et al (eds), Raven Press, New York
    • Kapikian, A.Z., Estes, M.K., and Chanock, R.M. 1996. Norwalk group of viruses, p. 783-810. In Fields, B.N. et al (eds), Virology. Raven Press, New York.
    • (1996) Virology , pp. 783-810
    • Kapikian, A.Z.1    Estes, M.K.2    Chanock, R.M.3
  • 22
    • 0029852469 scopus 로고    scopus 로고
    • Dot blot hybridization with a cDNA probe devided from the human calicivirus Sapporo 1982 strain
    • Kogawa, K., Nakata, S., Ukae, N., Adachi, N., Numata, K., Matoson, D.O., Estes, M.K., and Chiba, S. 1996. Dot blot hybridization with a cDNA probe devided from the human calicivirus Sapporo 1982 strain. Arch. Virol. 141: 1949-1959.
    • (1996) Arch. Virol. , vol.141 , pp. 1949-1959
    • Kogawa, K.1    Nakata, S.2    Ukae, N.3    Adachi, N.4    Numata, K.5    Matoson, D.O.6    Estes, M.K.7    Chiba, S.8
  • 25
    • 0029982312 scopus 로고    scopus 로고
    • Longitudinal study of molecular epidemiology of small round-structured viruses in a pediatric population
    • Levett, P.N., Gu, M., Luan, B., Fearon, M., Stubberfield, J., Jamieson, F., and Petric, M. 1996. Longitudinal study of molecular epidemiology of small round-structured viruses in a pediatric population. J. Clin. Microbiol. 34: 1497-1501.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 1497-1501
    • Levett, P.N.1    Gu, M.2    Luan, B.3    Fearon, M.4    Stubberfield, J.5    Jamieson, F.6    Petric, M.7
  • 26
    • 0028085539 scopus 로고
    • Molecular characterization of Hawaii virus and other Norwalk-like viruses: Evidence for genetic polymorphism among human caliciviruses
    • Lew, J.F., Kapikian, A.Z., Valdesuso, J., and Green, K.Y. 1994. Molecular characterization of Hawaii virus and other Norwalk-like viruses: evidence for genetic polymorphism among human caliciviruses. J. Infect. Dis. 170: 535-542.
    • (1994) J. Infect. Dis. , vol.170 , pp. 535-542
    • Lew, J.F.1    Kapikian, A.Z.2    Valdesuso, J.3    Green, K.Y.4
  • 27
    • 0028870178 scopus 로고
    • Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses
    • Lin, B.L., Clarke, I.N., Caul, E.O., Lambden, P.R. 1995. Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses. Arch. Virol. 140: 1345-1356.
    • (1995) Arch. Virol. , vol.140 , pp. 1345-1356
    • Lin, B.L.1    Clarke, I.N.2    Caul, E.O.3    Lambden, P.R.4
  • 28
    • 0028959542 scopus 로고
    • Molecular characterization of a human calicivirus with sequence relationships closer to animal caliciviruses than other known human caliciviruses
    • Matson, D.O., Zhong, W.M., Nakata, S., Numata, K., Jiang, X., Pickering, L.K., Chiba, S., and Estes, M.K. 1995. Molecular characterization of a human calicivirus with sequence relationships closer to animal caliciviruses than other known human caliciviruses. J. Med. Virol. 45: 215-222.
    • (1995) J. Med. Virol. , vol.45 , pp. 215-222
    • Matson, D.O.1    Zhong, W.M.2    Nakata, S.3    Numata, K.4    Jiang, X.5    Pickering, L.K.6    Chiba, S.7    Estes, M.K.8
  • 30
    • 0021801929 scopus 로고
    • Humoral immunity in infants with gastroenteritis caused by human calicivirus
    • Nakata, S., Chiba, S., Terashima, H., Yokoyama, T., and Nakao, T. 1985. Humoral immunity in infants with gastroenteritis caused by human calicivirus. J. Infect. Dis. 152: 274-279.
    • (1985) J. Infect. Dis. , vol.152 , pp. 274-279
    • Nakata, S.1    Chiba, S.2    Terashima, H.3    Yokoyama, T.4    Nakao, T.5
  • 31
    • 0023684312 scopus 로고
    • Detection of human calicivirus antigen and antibody by enzyme-linked immunosorbent assays
    • Nakata, S., Estes, M.K., and Chiba, S. 1988. Detection of human calicivirus antigen and antibody by enzyme-linked immunosorbent assays. J. Clin. Microbiol. 26: 2001-2005.
    • (1988) J. Clin. Microbiol. , vol.26 , pp. 2001-2005
    • Nakata, S.1    Estes, M.K.2    Chiba, S.3
  • 32
    • 0034089254 scopus 로고    scopus 로고
    • Members of the family Caliciviridae, Norwalk virus and Sapporo virus, are the most prevalent cause of gastroenteritis outbreaks in infants
    • in press
    • Nakata, S., Honma, S., Kinoshita-Numata, K., Kogawa, K., Ukae, S., Adachi, N., Morita, Y., and Chiba, S. 2000. Members of the family Caliciviridae, Norwalk virus and Sapporo virus, are the most prevalent cause of gastroenteritis outbreaks in infants. J. Infect. Dis. (in press)
    • (2000) J. Infect. Dis.
    • Nakata, S.1    Honma, S.2    Kinoshita-Numata, K.3    Kogawa, K.4    Ukae, S.5    Adachi, N.6    Morita, Y.7    Chiba, S.8
  • 33
    • 0030834338 scopus 로고    scopus 로고
    • Molecular characterization of morphologically typical human calicivirus Sapporo
    • Numata, K., Hardy, M.E., Nakata, S., Chiba, S., and Estes, M.K. 1997. Molecular characterization of morphologically typical human calicivirus Sapporo. Arch. Virol. 142: 1537-1552.
    • (1997) Arch. Virol. , vol.142 , pp. 1537-1552
    • Numata, K.1    Hardy, M.E.2    Nakata, S.3    Chiba, S.4    Estes, M.K.5
  • 34
    • 18344418216 scopus 로고    scopus 로고
    • Parkville virus: A novel genetic variant of human calicivirus in the Sapporo virus clade, associated with an outbreak of gastroenteritis in adults
    • Noel, J. S., Liu, B.L., Humphrey, C.D., Rodriguez, E.M., Lambden, P.R., Clarke, I.N., Dwyer, D.M., Ando, T., Glass, R.I., and Monroe, S.S. 1997. Parkville virus: a novel genetic variant of human calicivirus in the Sapporo virus clade, associated with an outbreak of gastroenteritis in adults. J. Med. Virol. 52: 173-178.
    • (1997) J. Med. Virol. , vol.52 , pp. 173-178
    • Noel, J.S.1    Liu, B.L.2    Humphrey, C.D.3    Rodriguez, E.M.4    Lambden, P.R.5    Clarke, I.N.6    Dwyer, D.M.7    Ando, T.8    Glass, R.I.9    Monroe, S.S.10
  • 35
    • 0031433253 scopus 로고    scopus 로고
    • Correlation of patient immune responses with genetically characterized small round-structured viruses involved in outbreaks of nonbacterial acute gastroenteritis in the United States, 1990 to 1995
    • Noel, J.S., Ando, T., Leite, J.P., Green, K.Y., Dingle, K.E., Estes, M.K., Seto, Y., Monroe, S.S., and Glass, R.I. 1997. Correlation of patient immune responses with genetically characterized small round-structured viruses involved in outbreaks of nonbacterial acute gastroenteritis in the United States, 1990 to 1995. J. Med. Virol. 53: 372-383.
    • (1997) J. Med. Virol. , vol.53 , pp. 372-383
    • Noel, J.S.1    Ando, T.2    Leite, J.P.3    Green, K.Y.4    Dingle, K.E.5    Estes, M.K.6    Seto, Y.7    Monroe, S.S.8    Glass, R.I.9
  • 36
    • 0030840864 scopus 로고    scopus 로고
    • Study of Norwalk virus and Mexico virus infections at Ga-Rankuwa Hospital, Ga-Rankuwa, South Africa
    • Smit, T.K., Steele, A.D., Peenze, I., Jiang, X., and Estes, M.K. 1997. Study of Norwalk virus and Mexico virus infections at Ga-Rankuwa Hospital, Ga-Rankuwa, South Africa. J. Clin. Microbiol. 35: 2381-2385.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2381-2385
    • Smit, T.K.1    Steele, A.D.2    Peenze, I.3    Jiang, X.4    Estes, M.K.5
  • 38
    • 0030930909 scopus 로고    scopus 로고
    • Incidence of human calicivirus and rotavirus infection in patients with gastroenteritis in South Africa
    • Wolfaardt, M., Taylor, M.B., Booysen, H.F., Engelbrecht, L., Grabow, W.O., and Jiang, X. 1997. Incidence of human calicivirus and rotavirus infection in patients with gastroenteritis in South Africa. J. Med. Virol. 51: 290-296.
    • (1997) J. Med. Virol. , vol.51 , pp. 290-296
    • Wolfaardt, M.1    Taylor, M.B.2    Booysen, H.F.3    Engelbrecht, L.4    Grabow, W.O.5    Jiang, X.6
  • 39
    • 0031596486 scopus 로고    scopus 로고
    • Small round-structured (Norwalk-like) viruses and classical human caliciviruses in southeastern Australia, 1980-1996
    • Wright, P.J., Gunesekere, I.C., Doultree, J.C., and Marshall, J.A. 1998. Small round-structured (Norwalk-like) viruses and classical human caliciviruses in southeastern Australia, 1980-1996. J. Med. Virol. 55: 312-320.
    • (1998) J. Med. Virol. , vol.55 , pp. 312-320
    • Wright, P.J.1    Gunesekere, I.C.2    Doultree, J.C.3    Marshall, J.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.