PCR-based diagnosis of infectious diseases;Zur PCR-basierten erregerdiagnostik in der pathologie

Pathologe

Volumn 21, Issue 3, 2000, Pages 218-228

  Schewe, C ^a   Rizzello, M ^a   Dietel, M ^a   Hauptmann, S ^a  

^a CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

Author keywords

Diagnostics; Infectious diseases; Mycobacteria; Polymerase chain reaction

Indexed keywords

DNA FRAGMENT;

DIAGNOSTIC ACCURACY; INFECTION; MYCOBACTERIUM; NONHUMAN; POLYMERASE CHAIN REACTION; QUALITY CONTROL; REVIEW; SAFETY; TISSUE FIXATION;

HUMANS; INFECTION; MYCOBACTERIUM INFECTIONS; PATHOLOGY; POLYMERASE CHAIN REACTION;

EID: 0034124872     PISSN: 01728113     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002920050391     Document Type: Review

References (40)

1. Burg JL, Graver CM, Pouletty P, Boothroyd JC (1989) Direct and sensitive detection of a pathogenic protozoan, Toxoplasma gondii, by polymerase chain reaction. J Clin Microbiol 27:1787-1792
2. Chang Y, Cesarman E, Pessin MS, Lee F, Culpepper J, Knowles DM (1994) Identification of herpes-like DNA sequences in AIDS-associated Karposi's sarcoma. Science 266:1865-1869
3. Chapel F, de Lamballerie X, de Micco C, Lebreuil G, de Micco P (1995) PCR analysis of hepatitis B virus in paraffin-embedded liver tissue from patients with chronic liver disease. Path Res Pract 191:961-966
4. Cook SM, Bartos RE, Pierson CL, Frank TS (1994) Detection and characterization of atypical mycobacteria by the polymerase chain reaction. Diagn Mol Pathol 3:53-58
5. Coombs NJ, Gough AC, Primrose JN (1999) Optimisation of DNA and RNA extraction from archival formalin-fixed tissue. Nucleic Acids Res 27:e12 i-iii
6. Costa JM, Durnand R, Denieu M, Rivollett D et al. (1996) PCR-linked immunosorbent assay for diagnosis of leishmaniasis in human immunodeficiency virus-infected patients. J Clin Microbiol 34:1831-1833
7. Del Portillo P, Murillo LA, Patarroyo ME (1991) Amplification of a species-specific DNA fragment of mycobacterium tuberculosis and its possible use in diagnosis. J Clin Microbiol 29:2163-2168
8. Demmler GJ, Buffone GJ, Schimbor CM, May RA (1988) Detection of cytomegalovirus in urine from newborns by using polymerase chain reaction DNA amplification. J Infect Dis 158:1177-1184
9. Dupouy-Camet J, Lavareda de Souza S, Maslo C et al. (1993) Detection of toxoplasma gondii in venous blood from AIDS patients by polymerase chain reaction. J Clin Microbiol 31:1866-1869
10. Eisenach KD, Cave MD, Bates JH, Crawford (1990) Polymerase chain reaction amplification of a repetitive DNA sequence specific for mycobacterium tuberculosis. J Infect Dis 161:977-981
11. Gassen HG, Sachse GE, Schulte A (1994) PCR Grundlagen und Anwendungen der Polymerase-Kettenreaktion. Gustav Fischer, Stuttgart Jena New York
12. Henson J, Rosenblum M, Armstrong D, Furneaux H (1991) Amplifieation of JC virus DNA from brain and cerebrospinal fluid of patients with progressive multifocal leukoencephalopathy. Neurology 41:1967-1971
13. Hierholzer JC, Halonen PE, Dahlen PO, Bingham PG, McDonough MM (1993) Detection of adenovirus in clinical specimens by polymerase chain reaction and liquid-phase hybridization quantitated by timeresolved fluorometry. J Clin Microbiol 31:1886-1891
14. Jiwa NM, Van Gemert GW, Raap AK et al. (1989) Rapid detection of human cytomegalovirus DNA in peripheral blood leukocytes of viremic transplant recipients by the polymerase chain reaction. Transplantation 48:72-76
15. Kaneko S, Feinstone SM, Miller RH (1989) Rapid and sensitive method for the detection of serum hepatitis B virus DNA using the polymerase chain reaction technique. J Clin Microbiol 27:1930-1933
16. Kitada K, Oka S, Kimura S et al. (1991) Detection of pneumocystis carinii sequences by polymerase chain reaction: animal models and clinical application to noninvasive specimens. J Clin Microbiol 29:1985-1990
17. Latchman DS (1995) PCR applications in pathology, principles and practice. In: Latchman DS (ed) Oxford Medical Publications, Oxford University Press, Oxford New York Tokyo
18. Mahony JB, Luinstra KE, Sellors JW, Chernesky MA (1993) Comparison of plasmid- and chromosome-based polymerase chain reaction assays for detecting chlamydia trachomatis nucleic acids. J Clin Microbiol 31:1753-1758
19. McOmish F, Yap PL, Jordan A, Hart H, Cohen BJ, Simmons P (1993) Detection of Parvovirus B19 in donated blood: a model system for screening by polymerase chain reaction. J Clin Microbiol 31:323-328
20. Morinet F (1990) PhD Thesis. University Paris, Paris
21. Nocton JJ et al. (1994) Detection of borrelia burgdorferii DNA by polymerase chain reaction in synovial fluid from patients with lyme arthritis. N Engl J Med 330:230-234
22. Pao CC, Yao DS, Lin CY et al. (1991) Serum hepatitis B virus DNA in hepatitis B virus seropositive and seronegative patients with normal liver function. Am J Clin Pathol 95:591-596
23. Pao CC, Yen B, You JB, Maa JS, Fiss EH, Chang CH (1990) Detection and identification of mycobacterium tuberculosis by DNA amplification. J Clin Microbiol 28:1877-1880
24. Puchhammer-Stöckl E, Kunz C, Wagner G, Enders G (1994) Detection of varizella zoster virus (VZV) in fetal tissue by polymerase chain reaction. J Perinat Med 22:65-69
25. Puchhammer-Stöckl E, Popow-Kraupp T, Heinz FX, Mandl CW, Kunz C (1991) Detection of varizella-zoster DNA by polymerase chain reaction in cerebrospinal fluid of patients suffering from neurological complications associated with chicken pox or herpes zoster. J Clin Microbiol 29:1513-1516
26. Relman DA, Schmidt TM, MacDermott RP, Falkow S (1992) Identification of the uncultured bacillus of Whipple's disease. N Engl J Med 327:293-301
27. Rodgers MR, Popper SJ, Wirth DF (1990) Amplification of kinetoplast DNA as a tool in the detection and diagnosis of leishmania. Exp Parasitol 71:267-275
28. Rogers BB, Josephson SL, Mak SK (1991) Detection of herpes simplex virus using the polymerase chain reaction followed by endonuclease cleavage. Am J Pathol 139:1-6
29. Saiki RK, Gelfand DH, Stoffel S et al. (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA poymerase. Science 239:487-491
30. Saito I, Servenius B, Compton T, Fox RI (1989) Detection of Epstein-Barr virus DNA by polymerase chain reaction in blood and tissue biopsies from patients with Sjogren's syndrome. J Exp Med 169:2191-2198
31. Shibata D, Weiss LM, Nathwani BN, Brynes RK, Levine AM (1991) Epstein-Barr virus in benign lymph node biopsies from individuels infected with the human immunodeficiency virus is associated with concurrent or subsequent development of Non-Hodgkin's lymphoma. Blood 77:1527-1533
32. Smits H, Schegget JT (1995) Detection and characterization of human papillomavirus infections in clinical specimens by polymerase chain reaction. In: Lachman DS (ed) PCR Applications in Pathology. Principles and Practice. Oxford University Press, Oxford, pp 30-63
33. Takewaki SI, Okuzumi K, Ishiko H, Nakahara KI, Ohkubo A, Nagai R (1993) Genus-specific polymerase chain reaction for the mycobacterial dnaJ gene and species -specific oligonucleotide probes. J Clin Microbiol 31:446-450
34. Ting Y, Manos MM (1990) Detection and typing of genital human papillomaviruses. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols: a guide to methods and applications. Academic Press, New York San Diego, pp 356-367
35. Turner PC, Bailey AS, Cooper RJ, Morris DJ (1993) The polymerase chain reaction for detecting adenovirus DNA in formalin-fixed, paraffin-embedded tissue obtained post mortem. J Infect 27:43-46
36. Wakefield AE, Prixley FJ, Banerji S, Sinclair K, Miller RF, Moxon ER, Hopkin JM (1990) Detection of pneumocystis carinii with DNA amplification. Lancet 336:451-453
37. Wink M, Wehrle H (1994) PCR im medizinischen und biologischen Labor - Handbuch für den Praktiker. GIT, Darmstadt
38. Wright DK, Manos MM (1990) Sample preparation from paraffin-embedded tissues. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols. A guide to methods and application. Academic Press, San Diego CA 92101, pp 153-158
39. Zeichert H, Grunert HP, Sawitzky D, Habermehl KO (1997) Molecular virus diagnostics: results from german external quality control program for quantitative PCR. Eur J Clin Chem Clin Biochem 35:A22
40. Young KKY, Resnick RM, Myers TW (1993) Detection of hepatitis C virus RNA by a combined reverse transcription-polymerase chain reaction assay. J Clin Microbiol 31:882-886