Purification, molecular cloning and ethylene-inducible expression of a soluble-type epoxide hydrolase from soybean (Glycine max [L.] Merr.)

European Journal of Biochemistry

Volumn 267, Issue 9, 2000, Pages 2649-2657

  Arahira, Masaomi ^a   Nong, Van Hai ^a   Udaka, Kyoko ^a   Fukazawa, Chikafusa ^a  

^a NATIONAL FOOD RESEARCH INSTITUTE   (Japan)

Author keywords

Enzyme purification; Epoxide hydrolase; Expression analysis; Molecular cloning; Soybean seeds

Indexed keywords

COMPLEMENTARY DNA; EPOXIDE HYDROLASE; ETHYLENE; MESSENGER RNA; OLIGONUCLEOTIDE; PHYTOHORMONE; RECOMBINANT PROTEIN; SOYBEAN PROTEIN; STYRENE OXIDE;

AMINO ACID SEQUENCE; ARTICLE; DNA LIBRARY; ENZYME ACTIVITY; ENZYME INDUCTION; ENZYME KINETICS; ENZYME PURIFICATION; GENE EXPRESSION SYSTEM; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PLANT GROWTH; PLANT SEED; PRIORITY JOURNAL; PROTEIN EXPRESSION; SOYBEAN;

AMINO ACID SEQUENCE; BASE SEQUENCE; BLOTTING, SOUTHERN; CLONING, MOLECULAR; DNA PRIMERS; DNA, COMPLEMENTARY; ENZYME INDUCTION; EPOXIDE HYDROLASES; ESCHERICHIA COLI; ETHYLENES; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; SEEDS; SEQUENCE HOMOLOGY, AMINO ACID; SOLUBILITY; SOYBEANS;

ESCHERICHIA COLI; GLYCINE MAX;

EID: 0034124265     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1432-1327.2000.01276.x     Document Type: Article

References (49)

1. 1. Ryan, C.A. & Jagendorf, A. (1995) Self defense by plants. Proc. Natl Acad. Sci. USA 92, 4075-4075.
2. 2. Bowles, D.J. (1990) Defense-related proteins in higher plants. Annu. Rev. Biochem. 59, 873-907.
3. 3. Peumans, W.J. & Van Damme, EJ. (1995) Lectins as plant defense proteins. Plant Physiol 109, 347-352.
4. 4. Birk, Y. (1996) Protease inhibitors in legume seeds - overview. Arch. Latinoam. Nutr. 44, 26S-30S.
5. 5. Yeboah, N.A., Arahira, M., Nong, V.H., Zhang, D.-Y., Kadokura, K., Watanabe, A. & Fukazawa, C. (1998) A class III acidic endochitinase is specifically expressed in the developing seeds of soybean (Glycine max [L.] Merr.). Plant. Mol. Biol. 36, 407-415.
6. 6. Arahira, M., Nong, V.H., Kadokura, K., Kimura, K., Udaka, K. & Fukazawa, C. (1998) Molecular cloning and expression patterns of Cu/Zn-superoxide dismutases in developing soybean seeds. Biosci. Biotech. Biochem. (Tokyo) 62, 1018-1021.
7. 7. Badami, R.C. & Patil, K.B. (1981) Structure and occurrence of unusual fatty acids in minor seed oils. Prog. Lipid Res. 19, 119-153.
8. 8. Ohta, H., Shida, K., Peng, Y.-L., Furusawa, I., Shishiyama, J., Aibara, S. & Morita, Y. (1990) The occurrence of lipid hydroperoxide-decomposing activities in rice and the relationship of such activities to the formation of antifungal substances. Plant Cell Physiol. 31, 1117-1122.
9. 9. Hamberg, M. & Fahlstadius, P. (1992) On the specificity of a fatty acid epoxygenase in broad bean. Plant Physiol. 99, 987-995.
10. 10. Beetham, J.K., Grant, D., Arand, M., Garbarino, J.E., Kiyosue, T., Pinot, F., Oesch, F., Belknap, W.R., Shinozaki, K. & Hammock, B.D. (1995) Gene evolution of epoxide hydrolyzes and recommended nomenclature DNA. Cell. Biol. 14, 61-71.
11. 11. Croteau, R. & Kolattukudy, P.E. (1975) Biosynthesis of hydroxyfatty acids polymers. Enzymatic epoxidation of 18-hydroxyoleic acid to 18-hydroxy-cis-9,10-epoxystearic acid by a particulate preparation from spinach (Spinacia oleracea). Arch. Biochem. Biophys. 170, 61-72.
12. 12. Croteau, R. & Kolattukudy, P.E. (1975) Biosynthesis of hydroxyfatty acids polymers. Enzymatic hydration of 18-hydroxy-cis-9,10-epoxystearic acid to threo-9,10,18-trihydroxystearic acid by a particulate preparation from apple (Malus pumila). Arch. Biochem. Biophys. 170, 73-81.
13. 13. Blee, E. & Schuber, F. (1992) Occurrence of fatty acid epoxide hydrolases in soybean (Glycine max). Biochem. J. 282, 711-714.
14. 14. Blee, E. & Schuber, F. (1992) Regio- and enantioselectivity of soybean fatty acid epoxide hydrolase. J. Biol. Chem. 267, 11881-11887.
15. 15. Blee, E. & Schuber, F. (1995) Stereocontrolled hydrolysis of the linolenic acid monoepoxide regioisomers catalyzed by soybean epoxide hydrolase. Eur. J. Biochem. 230, 229-234.
16. 16. Kiyosue, T., Beetham, J.K., Pinot, F., Hammock, B.D., Yamaguchi-Shinozaki, K. & Shinozaki, K. (1994) Characterization of an Arabidopsis cDNA for a soluble epoxide hydrolase gene that is inducible by auxin and water stress. Plant J. 6, 259-269.
17. 17. Stapleton, A., Beetham, J.K., Pinot, F., Garbarino, J.E., Rockhold, D.R., Friedman, M., Hammock, B.D. & Belknap, W.R. (1994) Cloning and expression of soluble epoxide hydrolase from potato. Plant J. 6, 251-258.
18. 18. Guo, A., Durner, J. & Klessig, D.F. (1998) Characterization of a tobacco epoxide hydrolase gene induced during the resistance response to TMV. Plant J. 15, 647-656.
19. 19. Arahira, M. & Fukazawa, C. (1994) Ginkgo HS seed storage proteins family mRNA: unusual Asn-Asn linkage as post-translational cleavage site. Plant. Mol. Biol. 25, 597-605.
20. 20. Boyd, V.L., Bozziri, M., Zon, G., Noble, R.L. & Mattaliano, R.J. (1992) Sequencing of peptides and proteins from the carboxy terminus. Anal. Biochem. 206, 344-352.
21. 21. Wang, Y, Arahira, M. & Fukazawa, C. (1999) An isoelectric separation of soybean β-amylase isoforms and their enzymic characteristics. Biosci. Biotech. Biochem. (Tokyo) 63, 726-730.
22. 22. Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254.
23. 23. Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227, 680-685.
24. 24. Johnson, M.L., Correia, J., Yphantis, D.A. & Halvorson, H.R. (1981) Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques. Biophys. J. 36, 575-588.
25. 25. Laue, T.M., Shah, B.D., Ridgeway, T.M. & Pelletier, S.L. (1992) In Analytical Ultracentrifugation in Biochemistry and Polymer Science (Harding, S.E., Rowe, A.J. & Horton, J.C., eds), pp. 90-125. Royal Society of Chemistry, Cambridge, UK.
26. 26. Fukazawa, C., Momma, T., Hirano, H., Harada, K. & Udaka, K. (1985) Cloning and sequencing of double-stranded cDNA complementary to a soybean storage protein Glycinin A3B4 mRNA. J. Biol. Chem. 260, 6334-6339.
27. 27. Watanabe, A., Nong, V.H., Zhang, D.-Y, Arahira, M., Yeboah, N.A., Udaka, K. & Fukazawa, C. (1999) Molecular cloning and ethylene-inducible expression of Chib1 chitinase from soybean (Glycine max (L.) Merr.). Biosci. Biotech. Biochem. (Tokyo) 63, 251-256.
28. 28. Totsuka, A. & Fukazawa, C. (1993) Expression and mutation of soybean β-amylase in Escherichia coli. Eur. J. Biochem. 214, 787-794.
29. 29. Ikeuchi, M. & Inoue, Y. (1988) A new photosystem II reaction center component (4.8 kDa protein) encoded by chloroplast genome. FEBS Lett. 241, 99-104.
30. 30. Moyer, M., Harper, A., Payne, G., Ryals, J. & Fowler, E. (1990) In situ digestion with pyroglutamate aminopeptidase for N-terminal sequencing electroblotted proteins. J. Protein Chein. 9, 282-283.
31. 31. Tsunazawa, S., Takakura, H. & Sakiyama, F. (1990) Microsequence analysis of N-acetylated proteins. J. Protein Chem. 9, 265-266.
32. 32. Gill, S., Ota, K. & Hammock, B.D. (1983) Radiometrie assays for mammalian epoxide hydrolases and glutathione S-transferase. Anal. Biochem. 131, 273-282.
33. 33. Pinot, F., Grant, D.F., Beetham, J.K., Parker, A.G., Borhan, B., Landt, S., Jones, A.D. & Hammock, B.D. (1995) Molecular and biochemical evidence for the involvement of the Asp333-His523 pair in catalytic mechanism of soluble epoxide hydrolase. J. Biol. Chem. 270, 7968-7974.
34. 34. Arand, M., Wagner, H. & Oesch, F. (1996) Asp333, Asp495, and His523 form the catalytic triad of rat soluble epoxide hydrolase. J. Biol. Chem. 271, 4223-4229.
35. 35. Rink, R., Fennema, M., Smids, M., Dehmel, U. & Janssen, D.B. (1997) Primary structure and catalytic mechanism of the epoxide hydrolase from Agrobacterium radiobacter AD1. J. Biol Chem. 272, 14650-14657.
36. 36. Kyte, J. & Doolittle, R.F. (1982) A simple method for displaying the hydropathic character of a protein. J. Mol Biol 157, 105-132.
37. 37. Von Heijne, G. (1986) A new method for predicting signal sequence cleavage site. Nucleic Acids Res. 14, 4683-4690.
38. 38. Dietze, E.C., Kuwano, E. & Hammock, B.D. (1994) Spectrophotomeric substrates for cytosolic epoxide hydrolase. Anal. Biochem. 216, 176-187.
39. 39. Blee, E. & Schuber, F. (1993) Biosynthesis of cutin monomers: involvement of a lipoxygenase/peroxygenase pathway. Plant J. 4, 113-123.
40. 40. Kato, T., Yamaguchi, Y, Uehara, T., Yokoyama, T., Namai, T. & Yamanaka, S. (1983) Defense mechanism of the rice plant against rice blast disease. Naturwissenschaften 70, 200-201.
41. 41. Kato, T., Yamaguchi, Y., Abe, N., Uehara, T., Namai, T., Kodama, M. & Shiobara, Y. (1985) Structure and synthesis of unsaturated trihydroxy C18 fatty acids in rice plants suffering from rice blast disease. Tetrahedron Lett. 26, 2357-2360.
42. 42. Masui, H., Kondo, T. & Kojima, M. (1989) An antifungal compound 9,12,13-trihydroxy-(E)-10-octadecenoic acid from Colocasia anti-quorum inoculated with Ceratocystis fimbriata. Phytochemistry. 28, 2613-2615.
43. 43. McCarthy, M.B. & White, R.E. (1983) Functional differences between peroxidase compound I and the cytochrome P-450 reactive oxygen intermediate. J. Biol. Chem. 258, 9153-9158.
44. 44. Blee, E. & Schuber, F. (1990) Efficient epoxidation of unsaturated fatty acids by a hydroperoxide-dependent oxygenase. J. Biol. Chem. 265, 12887-12894.
45. 45. Blee, E. & Schuber, F. (1990) Stereochemistry of the epoxidation of fatty acids catalyzed by soybean peroxygenase. Biochem. Biophys. Res. Commun. 173, 1354-1360.
46. 46. Hayakawa, M., Sugiyama, S., Takamura, T., Yokoo, K., Iwata, M., Suzuki, K., Taki, F., Takahashi, S. & Ozawa, T. (1986) Neutrophils biosynthesize leukotoxin, 9,10-epoxy-12-octadecenoate. Biochem. Biophys. Res. Commun. 137, 424-430.
47. 47. Ozawa, T., Hayakawa, M., Kosaka, K., Sugiyama, S., Ogawa, T., Yokoo, K., Aoyama, H. & Izawa, Y. (1991) Leukotoxin, 9,10-epoxy-12-octadecenoate, as a burn toxin causing adult respiratory distress syndrome. Adv. Prostuglandin Thromboxane Leukot Res. 21B, 569-572.
48. 48. Kosaka, K., Suzuki, K., Hayakawa, M., Sugiyama, S. & Ozawa, T. (1994) Leukotoxin, a linoleate epoxide: its implication in the late death of patients with extensive burns. Mol. Cell. Biochem. 139, 141-148.
49. 49. Moghaddam, M.F., Grant, D.F., Cheek, J.M., Greene, J.F., Williamson, K.C. & Hammock, B.D. (1997) Bioactivation of leukotoxins to their toxic diols by epoxide hydrolase. Nat. Med. 3, 562-566.