-
1
-
-
0030965301
-
Region 2.5 of the Escherichia coli RNA polymerase sigma 70 subunit is responsible for the recognition of the 'extended -10' motif at promoters
-
Barne, K.A., Bown, J.A., Busby, S.J., and Minchin, S.D. (1997) Region 2.5 of the Escherichia coli RNA polymerase sigma 70 subunit is responsible for the recognition of the 'extended -10' motif at promoters. EMBO J 16: 4034-4040.
-
(1997)
EMBO J
, vol.16
, pp. 4034-4040
-
-
Barne, K.A.1
Bown, J.A.2
Busby, S.J.3
Minchin, S.D.4
-
2
-
-
0024445091
-
FixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti
-
Batut, J., Daveran-Mingot, M.-L., David, M., Jacobs, J., Garnerone, A.M., and Kahn, D. (1989) fixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti. EMBO J 8: 1279-1286.
-
(1989)
EMBO J
, vol.8
, pp. 1279-1286
-
-
Batut, J.1
Daveran-Mingot, M.-L.2
David, M.3
Jacobs, J.4
Garnerone, A.M.5
Kahn, D.6
-
3
-
-
0031014708
-
Dissection of the transcription machinery for housekeeping genes of Bradyrhizobium japonicum
-
Beck, C., Marty, R., Klausli, S., Hennecke, H., and Göttfert, M. (1997) Dissection of the transcription machinery for housekeeping genes of Bradyrhizobium japonicum. J Bacteriol 179: 364-369.
-
(1997)
J Bacteriol
, vol.179
, pp. 364-369
-
-
Beck, C.1
Marty, R.2
Klausli, S.3
Hennecke, H.4
Göttfert, M.5
-
4
-
-
0025105632
-
An Fnr-like protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK
-
Colonna-Romano, S., Arnold, W., Schlüter, A., Boistard, P., Pühler, A., and Priefer, U.B. (1990) An Fnr-like protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK. Mol Gen Genet 223: 138-147.
-
(1990)
Mol Gen Genet
, vol.223
, pp. 138-147
-
-
Colonna-Romano, S.1
Arnold, W.2
Schlüter, A.3
Boistard, P.4
Pühler, A.5
Priefer, U.B.6
-
5
-
-
0023731837
-
Cascade regulation of nif gene expression in Rhizobium meliloti
-
David, M., Daveran, M.-L., Batut, J., Dedieu, A., Domergue, O., Ghai, J. et al. (1988) Cascade regulation of nif gene expression in Rhizobium meliloti. Cell 54: 671-684.
-
(1988)
Cell
, vol.54
, pp. 671-684
-
-
David, M.1
Daveran, M.-L.2
Batut, J.3
Dedieu, A.4
Domergue, O.5
Ghai, J.6
-
6
-
-
0028108941
-
Genetic regulation of nitrogen fixation in rhizobia
-
Fischer, H.-M. (1994) Genetic regulation of nitrogen fixation in rhizobia. Microb Rev 58: 352-386.
-
(1994)
Microb Rev
, vol.58
, pp. 352-386
-
-
Fischer, H.-M.1
-
7
-
-
0033537847
-
Identification of a surface of FNR overlapping activating region I that is required for repression of gene expression
-
Green, J., and Marshall, F.A. (1999) Identification of a surface of FNR overlapping activating region I that is required for repression of gene expression. J Biol Chem 274: 10244-10248.
-
(1999)
J Biol Chem
, vol.274
, pp. 10244-10248
-
-
Green, J.1
Marshall, F.A.2
-
8
-
-
0029797082
-
Reconstitution of the [4Fe-4S] cluster in Fnr and demonstration of the aerobic-anaerobic transcription switch in vitro
-
Green, J., Bennett, B., Jordan, P., Ralph, E.T., Thomson, A.J., and Guest, J.R. (1996) Reconstitution of the [4Fe-4S] cluster in Fnr and demonstration of the aerobic-anaerobic transcription switch in vitro. Biochem J 316: 887-892.
-
(1996)
Biochem J
, vol.316
, pp. 887-892
-
-
Green, J.1
Bennett, B.2
Jordan, P.3
Ralph, E.T.4
Thomson, A.J.5
Guest, J.R.6
-
9
-
-
0001947282
-
The Fnr modulon and Fnr-regulated gene expression
-
Lin, E.C.C., and Lynch, A.S. (eds). Austin, TX: R.G. Landes
-
Guest, J.R., Green, J., Irvine, A.S., and Spiro, S. (1996) The Fnr modulon and Fnr-regulated gene expression. In Regulation of Gene Expression in Escherichia coli. Lin, E.C.C., and Lynch, A.S. (eds). Austin, TX: R.G. Landes, pp. 347-342.
-
(1996)
Regulation of Gene Expression in Escherichia Coli
, pp. 347-1342
-
-
Guest, J.R.1
Green, J.2
Irvine, A.S.3
Spiro, S.4
-
10
-
-
1842406020
-
FnrN controls symbiotic nitrogen fixation and hydrogenase activities in Rhizobium leguminosarum biovar viciae UPM791
-
Gutierrez, D., Hernando, Y., Palacios, J.M., Imperial, J., and Ruiz-Argüeso, T. (1997) FnrN controls symbiotic nitrogen fixation and hydrogenase activities in Rhizobium leguminosarum biovar viciae UPM791. J Bacteriol 179: 5264-5270.
-
(1997)
J Bacteriol
, vol.179
, pp. 5264-5270
-
-
Gutierrez, D.1
Hernando, Y.2
Palacios, J.M.3
Imperial, J.4
Ruiz-Argüeso, T.5
-
11
-
-
0026800962
-
A new aspect of transcriptional control of the Escherichia coli crp gene: Positive autoregulation
-
Hanamura, A., and Aiba, H. (1992) A new aspect of transcriptional control of the Escherichia coli crp gene: positive autoregulation. Mol Microbiol 6: 2489-2497.
-
(1992)
Mol Microbiol
, vol.6
, pp. 2489-2497
-
-
Hanamura, A.1
Aiba, H.2
-
12
-
-
0029587019
-
The hypBFCDE operon from Rhizobium leguminosarum biovar viciae is expressed from an Fnr-type promoter that escapes mutagenesis of the fnrN gene
-
Hernando, Y., Palacios, J.M., Imperial, J., and Ruiz-Argüeso, T. (1995) The hypBFCDE operon from Rhizobium leguminosarum biovar viciae is expressed from an Fnr-type promoter that escapes mutagenesis of the fnrN gene. J Bacteriol 177: 5661-5669.
-
(1995)
J Bacteriol
, vol.177
, pp. 5661-5669
-
-
Hernando, Y.1
Palacios, J.M.2
Imperial, J.3
Ruiz-Argüeso, T.4
-
13
-
-
0024632337
-
Rhizobium meliloti regulatory gene fixJ activates transcription of Rhizobium meliloti nifA and fixK genes in Escherichia coli
-
Hertig, C., Li, R.Y., Louarn, A.-M., Garnerone, A.-M., David, M., Batut, J. et al. (1989) Rhizobium meliloti regulatory gene fixJ activates transcription of Rhizobium meliloti nifA and fixK genes in Escherichia coli. J Bacteriol 171: 1736-1738.
-
(1989)
J Bacteriol
, vol.171
, pp. 1736-1738
-
-
Hertig, C.1
Li, R.Y.2
Louarn, A.-M.3
Garnerone, A.-M.4
David, M.5
Batut, J.6
-
14
-
-
0026628893
-
Nucleotide sequence and characterization of four additional genes of the hydrogenase structural operon from Rhizobium leguminosarum bv. viciae
-
Hidalgo, E., Palacios, J.M., Murillo, J., and Ruiz-Argüeso, T. (1992) Nucleotide sequence and characterization of four additional genes of the hydrogenase structural operon from Rhizobium leguminosarum bv. viciae. J Bacteriol 174: 4130-4139.
-
(1992)
J Bacteriol
, vol.174
, pp. 4130-4139
-
-
Hidalgo, E.1
Palacios, J.M.2
Murillo, J.3
Ruiz-Argüeso, T.4
-
15
-
-
0024592012
-
Mutational analysis of the nucleotide sequence at the FNR-dependent nirb promoter in Escherichia coli
-
Jayaraman, P.S., Cole, J.A., and Busby, S.J.W. (1989) Mutational analysis of the nucleotide sequence at the FNR-dependent nirB promoter in Escherichia coli. Nucleic Acids Res 17: 135-146.
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 135-146
-
-
Jayaraman, P.S.1
Cole, J.A.2
Busby, S.J.W.3
-
16
-
-
0019884566
-
λ repressor and cro - Components of an efficient molecular switch
-
Johnson, A.D., Poteete, A.R., Lauer, G., Sauer, R.T., Ackers, G.K., and Ptashne, M. (1981) λ repressor and cro - components of an efficient molecular switch. Nature 294: 217-223.
-
(1981)
Nature
, vol.294
, pp. 217-223
-
-
Johnson, A.D.1
Poteete, A.R.2
Lauer, G.3
Sauer, R.T.4
Ackers, G.K.5
Ptashne, M.6
-
18
-
-
0030029817
-
DNA binding and dimerization of the Fe-S containing Fnr protein from Escherichia coli are regulated by oxygen
-
Lazazzera, B.A., Beinert, H., Khoroshilova, N., Kennedy, M.C., and Kiley, P.J. (1996) DNA binding and dimerization of the Fe-S containing Fnr protein from Escherichia coli are regulated by oxygen. J Biol Chem 271: 2762-2768.
-
(1996)
J Biol Chem
, vol.271
, pp. 2762-2768
-
-
Lazazzera, B.A.1
Beinert, H.2
Khoroshilova, N.3
Kennedy, M.C.4
Kiley, P.J.5
-
19
-
-
0023445510
-
Cloning and characterization of hydrogen uptake genes from Rhizobium leguminosarum
-
Leyva, A., Palacios, J.M., Mozo, T., and Ruiz-Argüeso, T. (1987) Cloning and characterization of hydrogen uptake genes from Rhizobium leguminosarum. J Bacteriol 169: 4929-4934.
-
(1987)
J Bacteriol
, vol.169
, pp. 4929-4934
-
-
Leyva, A.1
Palacios, J.M.2
Mozo, T.3
Ruiz-Argüeso, T.4
-
20
-
-
0025262020
-
Genetic organization of the hydrogen uptake (hup) cluster from Rhizobium leguminosarum
-
Leyva, A., Palacios, J.M., Murillo, J., and Ruiz-Argüeso, T. (1990) Genetic organization of the hydrogen uptake (hup) cluster from Rhizobium leguminosarum. J Bacteriol 172: 1647-1655.
-
(1990)
J Bacteriol
, vol.172
, pp. 1647-1655
-
-
Leyva, A.1
Palacios, J.M.2
Murillo, J.3
Ruiz-Argüeso, T.4
-
21
-
-
0001104525
-
Responses to molecular oxygen
-
Neidhardt, F.C. (ed. ). Washington, DC: American Society for Microbiology Press
-
Lynch, A.S., and Lin, E.C.C. (1996) Responses to molecular oxygen. In Escherichia coli and Salmonella: Cellular and Molecular Biology. Neidhardt, F.C. (ed. ). Washington, DC: American Society for Microbiology Press, pp. 1526-1538.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 1526-1538
-
-
Lynch, A.S.1
Lin, E.C.C.2
-
22
-
-
0030997843
-
Fnr-dependent repression of ndh gene expression requires two upstream Fnr-binding sites
-
Meng, W., Green, J., and Guest, J.R. (1997) Fnr-dependent repression of ndh gene expression requires two upstream Fnr-binding sites. Microbiology 143: 1521-1532.
-
(1997)
Microbiology
, vol.143
, pp. 1521-1532
-
-
Meng, W.1
Green, J.2
Guest, J.R.3
-
23
-
-
0003785155
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Miller, J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
24
-
-
0031595076
-
2, a crucial distributor in the fixLJ-dependent regulatory cascade for control of genes inducible by low oxygen levels
-
2, a crucial distributor in the fixLJ-dependent regulatory cascade for control of genes inducible by low oxygen levels. J Bacteriol 180: 5251-5255.
-
(1998)
J Bacteriol
, vol.180
, pp. 5251-5255
-
-
Nellen-Anthamatten, D.1
Rossi, P.2
Preisig, O.3
Kullik, I.4
Babst, M.5
Fischer, H.M.6
-
25
-
-
0025310185
-
Differential expression of hydrogen uptake (hup) genes in vegetative and symbiotic cells of Rhizobium leguminosarum
-
Palacios, J.M., Murillo, J., Leyva, A., and Ruiz-Argüeso, T. (1990) Differential expression of hydrogen uptake (hup) genes in vegetative and symbiotic cells of Rhizobium leguminosarum. Mol Gen Genet 221: 363-370.
-
(1990)
Mol Gen Genet
, vol.221
, pp. 363-370
-
-
Palacios, J.M.1
Murillo, J.2
Leyva, A.3
Ruiz-Argüeso, T.4
-
28
-
-
0001416657
-
Escherichia coli RNA polymerase (Eσ70), promoters, and the kinetics of the steps of transcription initiation
-
Neidhardt, F.C. (ed. ). Washington, DC: American Society for Microbiology Press
-
Record, M.T., Reznikoff, W.S., Craig, M.L., McQuade, K.L., and Schlax, P.J. (1996) Escherichia coli RNA polymerase (Eσ70), promoters, and the kinetics of the steps of transcription initiation. In Escherichia Coli and Salmonella: Cellular and Molecular Biology. Neidhardt, F.C. (ed. ). Washington, DC: American Society for Microbiology Press, pp. 792-821.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology
, pp. 792-821
-
-
Record, M.T.1
Reznikoff, W.S.2
Craig, M.L.3
McQuade, K.L.4
Schlax, P.J.5
-
29
-
-
0032955002
-
Repression of transcription initiation in bacteria
-
Rojo, F. (1999) Repression of transcription initiation in bacteria. J Bacteriol 181: 2987-2991.
-
(1999)
J Bacteriol
, vol.181
, pp. 2987-2991
-
-
Rojo, F.1
-
30
-
-
0003903343
-
Molecular cloning
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular cloning. A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1989)
A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
31
-
-
0027490506
-
Specific transcriptional requirements for positive regulation of the anaerobically inducible pfl operon by ArcA and Fnr
-
Sawers, G. (1993) Specific transcriptional requirements for positive regulation of the anaerobically inducible pfl operon by ArcA and Fnr. Mol Microbiol 10: 737-747.
-
(1993)
Mol Microbiol
, vol.10
, pp. 737-747
-
-
Sawers, G.1
-
32
-
-
0028960228
-
Inhibition of transcription initiation by lac represor
-
Schlax, P.E., Capp, M.W., and Record, M.T. (1995) Inhibition of transcription initiation by lac represor. J Mol Biol 27: 331-350.
-
(1995)
J Mol Biol
, vol.27
, pp. 331-350
-
-
Schlax, P.E.1
Capp, M.W.2
Record, M.T.3
-
33
-
-
0026440589
-
The Rhizobium leguminosarum FnrN protein is functionally similar to Escherichia coli Fnr and promotes heterologous oxygen-dependent activation of transcription
-
Schlüter, A., Patschkowski, T., Unden, G., and Priefer, U.B. (1992) The Rhizobium leguminosarum FnrN protein is functionally similar to Escherichia coli Fnr and promotes heterologous oxygen-dependent activation of transcription. Mol Microbiol 6: 3395-3404.
-
(1992)
Mol Microbiol
, vol.6
, pp. 3395-3404
-
-
Schlüter, A.1
Patschkowski, T.2
Unden, G.3
Priefer, U.B.4
-
34
-
-
0022186670
-
Measurement of protein using bicinchoninic acid
-
Smith, P.K., Krohn, R.I., Hermanson, G.T., Mallia, A.K., Gartner, F.H., Provenzano, M.D. et al. (1985) Measurement of protein using bicinchoninic acid. Anal Biochem 150: 76-85.
-
(1985)
Anal Biochem
, vol.150
, pp. 76-85
-
-
Smith, P.K.1
Krohn, R.I.2
Hermanson, G.T.3
Mallia, A.K.4
Gartner, F.H.5
Provenzano, M.D.6
-
36
-
-
34250107503
-
Promoters in the nodulation region of the Rhizobium leguminosarum sym plasmid pRL1JI
-
Spaink, H.P., Okker, R.J.H., Wijffelman, C.A., Pees, E., and Lugtenberg, B.J.J. (1987) Promoters in the nodulation region of the Rhizobium leguminosarum Sym plasmid pRL1JI. Plant Mol Biol 9: 27-39.
-
(1987)
Plant Mol Biol
, vol.9
, pp. 27-39
-
-
Spaink, H.P.1
Okker, R.J.H.2
Wijffelman, C.A.3
Pees, E.4
Lugtenberg, B.J.J.5
-
37
-
-
0028556430
-
The Fnr family of transcriptional regulators
-
Spiro, S. (1994) The Fnr family of transcriptional regulators. Antonie Van Leeuwenhoek 66: 23-36.
-
(1994)
Antonie Van Leeuwenhoek
, vol.66
, pp. 23-36
-
-
Spiro, S.1
-
38
-
-
0023571178
-
Regulation and over-expression of the fnr gene of Escherichia coli
-
Spiro, S., and Guest, J.R. (1987) Regulation and over-expression of the fnr gene of Escherichia coli. J Gen Microbiol 133: 3279-3288.
-
(1987)
J Gen Microbiol
, vol.133
, pp. 3279-3288
-
-
Spiro, S.1
Guest, J.R.2
-
39
-
-
0025173637
-
Interconversion of the DNA-binding specificities of two related transcriptional regulators, CRP and FNR
-
Spiro, S., Gaston, K.L., Bell, A.I., Roberts, R.E., Busby, S.J.W., and Guest, J.R. (1990) Interconversion of the DNA-binding specificities of two related transcriptional regulators, CRP and FNR. Mol Microbiol 4: 1831-1838.
-
(1990)
Mol Microbiol
, vol.4
, pp. 1831-1838
-
-
Spiro, S.1
Gaston, K.L.2
Bell, A.I.3
Roberts, R.E.4
Busby, S.J.W.5
Guest, J.R.6
-
40
-
-
0002878518
-
Expression using the T7 RNA polymerase promoter system
-
Ausubel, F.A., Brent, R., Leingston, R.E., Moore, D.D., Seidman, J.G., Smith, J.A., et al. (eds). New York: Greene Publishing and Wiley Interscience
-
Tabor, S. (1990) Expression using the T7 RNA polymerase promoter system. In Current Protocols in Molecular Biology. Ausubel, F.A., Brent, R., Leingston, R.E., Moore, D.D., Seidman, J.G., Smith, J.A., et al. (eds). New York: Greene Publishing and Wiley Interscience, pp. 16.2.1-16.2.11.
-
(1990)
Current Protocols in Molecular Biology
, pp. 1621-16211
-
-
Tabor, S.1
-
41
-
-
0031037665
-
FnrP and Nnr of Paracoccus denitrificans are both members of the Fnr family of transcriptional activators but have distints roles in respiratory adaptation in response to oxygen limitation
-
Van Spanning, R.J., De Boer, A.P., Reijnders, W.N., Westerhoff, H.V., Stouthamer, A.H., and Van der Oost, J. (1997) FnrP and Nnr of Paracoccus denitrificans are both members of the Fnr family of transcriptional activators but have distints roles in respiratory adaptation in response to oxygen limitation. Mol Microbiol 23: 893-907.
-
(1997)
Mol Microbiol
, vol.23
, pp. 893-907
-
-
Van Spanning, R.J.1
De Boer, A.P.2
Reijnders, W.N.3
Westerhoff, H.V.4
Stouthamer, A.H.5
Van Der Oost, J.6
-
42
-
-
0033060309
-
Multiple transcription factors of the FNR family in denitrifying Pseudomonas stutzeri: Characterization of four fnr-like genes, regulatory responses and cognate metabolic processes
-
Vollack, K.-U., Hartig, E., Korner, H., and Zumft, W.G. (1999) Multiple transcription factors of the FNR family in denitrifying Pseudomonas stutzeri: characterization of four fnr-like genes, regulatory responses and cognate metabolic processes. Mol Microbiol 31: 1681-1694.
-
(1999)
Mol Microbiol
, vol.31
, pp. 1681-1694
-
-
Vollack, K.-U.1
Hartig, E.2
Korner, H.3
Zumft, W.G.4
-
43
-
-
0031862145
-
Positive and negative autoregulation of REB1 transcription in Saccharomyces cerevisiae
-
Wang, K.L.-C., and Warner, J.R. (1998) Positive and negative autoregulation of REB1 transcription in Saccharomyces cerevisiae. Mol Cell Biol 18: 4368-4376.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 4368-4376
-
-
Wang, K.L.-C.1
Warner, J.R.2
-
44
-
-
0032526674
-
Repression of transcription initiation by Escherichia coli FNR protein: Repression by FNR can be simple
-
Williams, S.M., Wing, H.J., and Busby, S.J.W. (1998) Repression of transcription initiation by Escherichia coli FNR protein: repression by FNR can be simple. FEMS Microbiol Lett 163: 203-208.
-
(1998)
FEMS Microbiol Lett
, vol.163
, pp. 203-208
-
-
Williams, S.M.1
Wing, H.J.2
Busby, S.J.W.3
-
45
-
-
0028853643
-
Spacing requirements for transcription activation by Escherichia coli Fnr protein
-
Wing, H.J., Williams, S.M., and Busby, S.J.W. (1995) Spacing requirements for transcription activation by Escherichia coli Fnr protein. J Bacteriol 177: 6704-6710.
-
(1995)
J Bacteriol
, vol.177
, pp. 6704-6710
-
-
Wing, H.J.1
Williams, S.M.2
Busby, S.J.W.3
|