Ty1-copia-retrotransposon behavior in a polyploid cotton

Chromosome Research

Volumn 8, Issue 1, 2000, Pages 73-76

  Hanson, Robert E ^a   Islam Faridi, M Nurul ^a   Crane, Charles F ^a   Zwick, Michael S ^a   Czeschin, Don G ^a   Wendel, Jonathan F ^b   McKnight, Thomas D ^a   Price, H James ^a   Stelly, David M ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b IOWA STATE UNIVERSITY   (United States)

Author keywords

Evolution; Genome; Gossypium; Polyploidization; Repetitive element; Retrotransposon

Indexed keywords

ARTICLE; COTTON; DIPLOIDY; FLUORESCENCE IN SITU HYBRIDIZATION; GENOME; POLYPLOIDY; PRIORITY JOURNAL; RETROPOSON;

GOSSYPIUM; IN SITU HYBRIDIZATION, FLUORESCENCE; POLYPLOIDY; RETROELEMENTS;

GOSSYPIUM; GOSSYPIUM ARBOREUM; GOSSYPIUM HIRSUTUM; GOSSYPIUM RAIMONDII; HIRSUTUM;

EID: 0034105797     PISSN: 09673849     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1009239522541     Document Type: Article

References (25)

1. Beasley JO (1940) The origin of American tetraploid Gossypium species. Am Nat 74. 285-286.
2. Endrizzi JE, Turcotte EL, Kohel RJ (1985) Genetics, cytology, and evolution of Gossypium. Adv Genet 23: 271-375.
3. Flavell AJ, Dunbar E, Anderson R, Pearce SR, Hartley R, Kumar A (1992a) Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucleic Acids Res 20: 3639-3644.
4. Flavell AJ, Smith DB, Kumar A (1992b) Extreme heterogeneity of Ty1-copia group retrotransposons in plants. Mol Gen Genet 231: 233-242.
5. Fryxell PA (1992) A revised taxanomic interpretation of Gossypium L. Rheedea 2: 108-165.
6. Hanson RE, Islam-Faridi MN, Percival EA et al. (1996) Distributions of 5S and 18S-28S rDNA loci in a tetraploid cotton (Gossypium hirsutum L.) and its putative diploid ancestors. Chromosoma 105: 55-61.
7. Holland J, Spindler K, Horodyski F, Grabau E, Nichol S, VandePol S (1982) Rapid evolution of RNA genomes. Science 215: 1577-1585.
8. Jewell DC, Islam-Faridi MN (1994) Details of a technique for somatic chromosome preparation and C-banding of maize. In: Freeling M, Walbot V, eds. The Maize Handbook. New York: Springer-Verlag, pp 484-493.
9. Kamm A, Doudrick RL, Heslop-Harrison JS, Schmidt T (1996) The genomic and physical organization or Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. elliottii and other gymnosperms. Proc Natl Acad Sci USA 93: 2708-2713.
10. Katsiotis A, Schmidt T, Heslop-Harrison JS (1996) Chromosomal and genomic organization of Ty1-copia-like retrotransposon sequences in the genus Avena. Genome 39: 410-417.
11. Konieczny AD, Voytas DF, Cummings MP, Ausubel FM (1991) A superfamily of Arabidopsis thaliana retrotransposons. Genetics 127: 801-809.
12. Kumar A (1996) The adventures of the Ty1-copia group of retro-transposons in plants. Trends Genet 12: 41-43.
13. Masterson J (1994) Stomatal size in fossil plants: evidence for polyploidy in the majority of angiosperms. Science 264: 421-424.
14. Menzel MY (1954) A cytological method for genome analysis in Gossypium. Genetics 40: 214-223.
15. Pearce SR, Harrison G, Li D, Heslop-Harrison JS, Kumar A, Flavell AJ (1996a) The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation. Mol Gen Genet 250: 305-315.
16. Pearce SR, Pich U, Harrison G et al. (1996b) The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin. Chromosome Res 4: 357-364.
17. Schmidt T, Kubis S, Heslop-Harrison JS (1995) Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.)-LINEs and Ty1-copia-like elements as major components of the genome. Chromosome Res 3: 335-345.
18. Silhavy TJ, Berman ML, Enquist LW (1984) Experiments with Gene Fusion. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp 144-146.
19. Soltis DE, Soltis PS (1993) Molecular data and the dynamic nature of polyploidy. Crit Rev Plant Sci 12: 243-273.
20. Suoniemi A, Anamthawat-Jonsson K, Arna T, Schulman A (1996) Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome. Plant Mol Biol 30: 1321-1329.
21. VanderWeil PL, Voytas DF, Wendel JF (1993) Ty1-copra-like retro-transposable element evolution in diploid and polyploid cotton (Gossypium L.). J Mol Evol 36: 429-447.
22. Voytas DF, Konieczny A, Cummings MP, Ausubel FM (1990) The structure, distribution and evolution of the Tal retrotransposable element family of Arabidopsis thaliana. Genetics 125: 713-721.
23. Wendel JF (1989) New World tetraploid cottons contain Old World cytoplasm. Proc Natl Acad Sci USA 86: 4132-4136.
24. Wendel JF, Albert VA (1992) Phylogenetics of the cotton genus (Gossypium L.): character-state weighted parsimony analysis of chloroplast DNA restriction site data and its systematic and biogeographic implications. Syst Bot 17: 115-143.
25. Woodruff RC, Slatko BE, Thompson JN Jr (1982) Factors affecting mutation rate in natural populations. In: Ashburner M, Carson HL, Thompson JN Jr, eds. The Genetics and Biology of Drosophila, Vol 3C, London and New York: Academic Press, Chapter 20, pp. 37-124.