-
1
-
-
0032512051
-
The genome sequence of rickettsia prowazekii and the origin of mitochondria
-
Andersson SGE, Zomorodipour A, Andersson JO, SicheritzPonten T, Alsmark UCM, Podowski RM, Naslund AK, Eriksson AS, Winkler HH, Kurland CG. 1998. The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature 396:133-140.
-
(1998)
Nature
, vol.396
, pp. 133-140
-
-
Andersson, S.G.E.1
Zomorodipour, A.2
Andersson, J.O.3
Sicheritzponten, T.4
Alsmark, U.C.M.5
Podowski, R.M.6
Naslund, A.K.7
Eriksson, A.S.8
Winkler, H.H.9
Kurland, C.G.10
-
2
-
-
0030837927
-
Are there dominant membrane protein families with a given number of helices?
-
Arkin IT, Brünger AT, Engelman DM. 1997. Are there dominant membrane protein families with a given number of helices? Proteins Struct Funct Genet 28:465-466.
-
(1997)
Proteins Struct Funct Genet
, vol.28
, pp. 465-466
-
-
Arkin, I.T.1
Brünger, A.T.2
Engelman, D.M.3
-
3
-
-
0025796712
-
The SWISS-PROT protein-sequence data-bank
-
Bairoch A, Boeckmann B. 1991. The SWISS-PROT protein-sequence data-bank. Nucleic Adds Res 19:2247-2248.
-
(1991)
Nucleic Adds Res
, vol.19
, pp. 2247-2248
-
-
Bairoch, A.1
Boeckmann, B.2
-
4
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner FR, Plunkett G III, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, et al. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1462.
-
(1997)
Science
, vol.277
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett G. III2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
Riley, M.6
Collado-Vides, J.7
Glasner, J.D.8
Rode, C.K.9
Mayhew, G.F.10
-
5
-
-
0032931770
-
G+C content variation along and among saccharomyces cerevisiae chromosomes
-
Bradnam KR, Seoighe C, Sharp PM, Wolfe KH. 1999. G+C content variation along and among Saccharomyces cerevisiae chromosomes. Mol Biol Evol 16:666-675.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 666-675
-
-
Bradnam, K.R.1
Seoighe, C.2
Sharp, P.M.3
Wolfe, K.H.4
-
6
-
-
16044367245
-
Complete genome sequence of the methanogenic archaeon, Methanncaccas jannaschii
-
Bult CJ, White O, Olsen GJ, Zhou LX, Fleischmann RD, Sutton GG, Blake JA, FitzGerald LM, Clayton RA, Gocayne JD, et al. 1996. Complete genome sequence of the methanogenic archaeon, Methanncaccas jannaschii. Science 282:1058-1073.
-
(1996)
Science
, vol.282
, pp. 1058-1073
-
-
Bult, C.J.1
White, O.2
Olsen, G.J.3
Zhou, L.X.4
Fleischmann, R.D.5
Sutton, G.G.6
Blake, J.A.7
Fitzgerald, L.M.8
Clayton, R.A.9
Gocayne, J.D.10
-
7
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
CESC (C. elegans Sequencing Consortium). 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 229: 2012-2018.
-
(1998)
Science
, vol.229
, pp. 2012-2018
-
-
-
8
-
-
0032952822
-
Using the saccharomyces genome Database (SGD) for analysis of protein similarities and structure
-
Chervitz SA, Hester ET, Ball CA, Dolinski K, Dwight SS, Harris MA, Juvik G, Malekian A, Roberts S, Roe T, et al. 1999. Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure. Nucleic Acid Res 27:74-78.
-
(1999)
Nucleic Acid Res
, vol.27
, pp. 74-78
-
-
Chervitz, S.A.1
Hester, E.T.2
Ball, C.A.3
Dolinski, K.4
Dwight, S.S.5
Harris, Ma.6
Juvik, G.7
Malekian, A.8
Roberts, S.9
Roe, T.10
-
9
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
Cole ST, Brosch R, Parkhill J, Gamier T, Churcher C, Harris D, Gordon SV, Eiglmeier K, Gas S, Barry CE, et al. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537-544.
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
Gamier, T.4
Churcher, C.5
Harris, D.6
Gordon, S.V.7
Eiglmeier, K.8
Gas, S.9
Barry, C.E.10
-
10
-
-
0022995724
-
Amino acid composition of the membrane and aqueous domains of integral membrane proteins
-
Deber CM, Brandl CJ, Deber RB, Hsu LC, Young XK. 1986. Amino acid composition of the membrane and aqueous domains of integral membrane proteins. Arch Biochem Biophys 251:68-76.
-
(1986)
Arch Biochem Biophys
, vol.251
, pp. 68-76
-
-
Deber, C.M.1
Brandl, C.J.2
Deber, R.B.3
Hsu, L.C.4
Young, X.K.5
-
11
-
-
0032568375
-
The complete genome of the hyperthermophilic bacterium aquifex aeolicus
-
Deckert G, Warren PV, Gaasterland T, Young WG, Lenox AL, Grahams DE, Overbeek R, Snead MA, Keller M, Aujay M, et al. 1998. The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392:353-358.
-
(1998)
Nature
, vol.392
, pp. 353-358
-
-
Deckert, G.1
Warren, P.V.2
Gaasterland, T.3
Young, W.G.4
Lenox, A.L.5
Grahams, D.E.6
Overbeek, R.7
Snead, M.A.8
Keller, M.9
Aujay, M.10
-
12
-
-
0025371555
-
A critical evaluation of the hydropathy profile of membrane protein
-
Degli Esposito M, Crimi M, Venturoli G. 1990. A critical evaluation of the hydropathy profile of membrane protein. Eur J Biochem 190:207-219.
-
(1990)
Eur J Biochem
, vol.190
, pp. 207-219
-
-
Degli Esposito, M.1
Crimi, M.2
Venturoli, G.3
-
13
-
-
0022510143
-
Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins
-
Engelman DM, Steitz TA, Goldman A. 1986. Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins. Annu Rev Biophys Biophys Chem 15:321-353.
-
(1986)
Annu Rev Biophys Biophys Chem
, vol.15
, pp. 321-353
-
-
Engelman, D.M.1
Steitz, T.A.2
Goldman, A.3
-
14
-
-
0029653518
-
Whose-genome random sequencing and assembly of haemophilus influenzae rd
-
Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, Bult CJ, Tomb JF, Dougherty BA, Merrick JM, et al. 1995. Whose-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269:496-521.
-
(1995)
Science
, vol.269
, pp. 496-521
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kerlavage, A.R.6
Bult, C.J.7
Tomb, J.F.8
Dougherty, B.A.9
Merrick, J.M.10
-
15
-
-
0031470826
-
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
-
Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra R, White O, Ketchum KA, Dodson R, Hickey EK, et al. 1997. Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi. Nature 390:580-586.
-
(1997)
Nature
, vol.390
, pp. 580-586
-
-
Fraser, C.M.1
Casjens, S.2
Huang, W.M.3
Sutton, G.G.4
Clayton, R.5
Lathigra, R.6
White, O.7
Ketchum, K.A.8
Dodson, R.9
Hickey, E.K.10
-
16
-
-
0028829125
-
The minimal gene complement of Mycoplasma genitalium
-
Fraser CM, Gucayne JD, White O, Adams MD, Clayton RA, Fleischmann RD, Bult CJ, Kerlavage AR, Sutton G, Kelley JM, et al. 1995. The minimal gene complement of Mycoplasma genitalium. Science 270:397-403.
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
Gucayne, J.D.2
White, O.3
Adams, M.D.4
Clayton, R.A.5
Fleischmann, R.D.6
Bult, C.J.7
Kerlavage, A.R.8
Sutton, G.9
Kelley, J.M.10
-
17
-
-
0032540874
-
Complete genome sequence of treponema pallidum, the syphilis spirochete
-
Fraser CM, Morris SJ, Weinstock GM, White O, Sutton GG, Dodson R, Gwinn M, Mickey EK, Clayton R, Ketchum KA, et al. 1998. Complete genome sequence of Treponema pallidum, the syphilis spirochete. Science 281:375-388.
-
(1998)
Science
, vol.281
, pp. 375-388
-
-
Fraser, C.M.1
Morris, S.J.2
Weinstock, G.M.3
White, O.4
Sutton, G.G.5
Dodson, R.6
Gwinn, M.7
Mickey, E.K.8
Clayton, R.9
Ketchum, K.A.10
-
18
-
-
0032870331
-
Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis
-
Garcia-Vallve S, Palau J, Romeu A. 1999. Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis. Mol Biol Evol 16:1125-1134.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1125-1134
-
-
Garcia-Vallve, S.1
Palau, J.2
Romeu, A.3
-
19
-
-
10544255079
-
Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae
-
Himmelreich R, Hilbert H, Plagens H, Pirkl E, Li BC, Hermann R. 1996. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucleic Acid Res 24:4420-4449.
-
(1996)
Nucleic Acid Res
, vol.24
, pp. 4420-4449
-
-
Himmelreich, R.1
Hilbert, H.2
Plagens, H.3
Pirkl, E.4
Li, B.C.5
Hermann, R.6
-
20
-
-
0032953228
-
Comparative genomes of Chlamydia pneumoniae and C-trachomatis
-
Kalman S, Mitchell W, Marathe R, Lammel C, Fan L, Hyman RW, Olinger L, Grimwood L, Davis RW, Stephens RS. 1999. Comparative genomes of Chlamydia pneumoniae and C-trachomatis. Nat Genet 21:385-389.
-
(1999)
Nat Genet
, vol.21
, pp. 385-389
-
-
Kalman, S.1
Mitchell, W.2
Marathe, R.3
Lammel, C.4
Fan, L.5
Hyman, R.W.6
Olinger, L.7
Grimwood, L.8
Davis, R.W.9
Stephens, R.S.10
-
21
-
-
0032579989
-
Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium
-
Kawarahayasi Y, Sawada M, Horikawa H, Haikawa Y, Hino Y, Yamamoto S, Sekine M, Baba S, Kosugi H, Hosoyama A, et al. 1998. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium. Pyrococcus horikoshii 0T3. DNA Res 5:55-76.
-
(1998)
Pyrococcus Horikoshii 0T3. DNA Res
, vol.5
, pp. 55-76
-
-
Kawarahayasi, Y.1
Sawada, M.2
Horikawa, H.3
Haikawa, Y.4
Hino, Y.5
Yamamoto, S.6
Sekine, M.7
Baba, S.8
Kosugi, H.9
Hosoyama, A.10
-
22
-
-
0031458333
-
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
-
Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, et al. 1997. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature 390:364-370.
-
(1997)
Nature
, vol.390
, pp. 364-370
-
-
Klenk, H.P.1
Clayton, R.A.2
Tomb, J.F.3
White, O.4
Nelson, K.E.5
Ketchum, K.A.6
Dodson, R.J.7
Gwinn, M.8
Hickey, E.K.9
Peterson, J.D.10
-
23
-
-
0030731108
-
The complete genome sequence of the gram-positive bacterium bacillus subtilis
-
Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessieres P, Bolotin A, Borchert S, et al. 1997. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390: 249-256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
-
24
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte J, Doolittle RF. 1982. A simple method for displaying the hydropathic character of a protein. J Mol Biol 157:105-132.
-
(1982)
J Mol Biol
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
25
-
-
0028458257
-
A measure of helical propensity for amino acids in membrane environments
-
Li SC, Deber CM. 1994a. A measure of helical propensity for amino acids in membrane environments. Nat Struct Biol 1:558.
-
(1994)
Nat Struct Biol
, vol.1
, pp. 558
-
-
Li, S.C.1
Deber, C.M.2
-
26
-
-
0028458257
-
A measure of helical propensity for amino acids in membrane environments
-
Li SC, Deber CM. 1994b. A measure of helical propensity for amino acids in membrane environments. Nat Struct Biol 1:368-373.
-
(1994)
Nat Struct Biol
, vol.1
, pp. 368-373
-
-
Li, S.C.1
Deber, C.M.2
-
27
-
-
0031812609
-
Cyanobase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. Strain PCC6803
-
Nakamura Y, Kaneko T, Hirosawa M, Miyajima N, Tabata S. 1998. CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803. Nucleic Acid Res 26:63-67.
-
(1998)
Nucleic Acid Res
, vol.26
, pp. 63-67
-
-
Nakamura, Y.1
Kaneko, T.2
Hirosawa, M.3
Miyajima, N.4
Tabata, S.5
-
28
-
-
0023989064
-
Improved tools for biological sequence comparison
-
Pearson WR, Lipman DJ. 1988. Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85:2444-2448.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
29
-
-
0024346677
-
Hydrophobic organization of membrane proteins
-
Rees DC, DeAntonio L, Eisenberg D. 1989. Hydrophobic organization of membrane proteins. Science 245:510-513.
-
(1989)
Science
, vol.245
, pp. 510-513
-
-
Rees, D.C.1
DeAntonio, L.2
Eisenberg, D.3
-
31
-
-
0030038634
-
Topology prediction for helical transmembrane proteins at 86% accuracy
-
Rost B, Fariselli P, Casadio R. 1996. Topology prediction for helical transmembrane proteins at 86% accuracy. Protein Sci 5:1704-1718.
-
(1996)
Protein Sci
, vol.5
, pp. 1704-1718
-
-
Rost, B.1
Fariselli, P.2
Casadio, R.3
-
32
-
-
0027218266
-
The isochore patterns of mammalian genomes and their phylogenetic implications
-
Sabeur G, Macaya G, Kadi F, Bernardi G. 1993. The isochore patterns of mammalian genomes and their phylogenetic implications. J Mol Evol 37:93-108.
-
(1993)
J Mol Evol
, vol.37
, pp. 93-108
-
-
Sabeur, G.1
Macaya, G.2
Kadi, F.3
Bernardi, G.4
-
33
-
-
15644383855
-
Complete genome sequence of Methanobacterium thermoautotrophicum DeltaH: Functional analysis and comparative genomics
-
Smith DR, Doucette-Stamm LA, Deloughery C, Lee HM, Dubois J, Aldredge T, Bashirzadeh R, Blakely D, Cook R, Gilbert K, et al. 1997. Complete genome sequence of Methanobacterium thermoautotrophicum DeltaH: Functional analysis and comparative genomics. J Bacteriol 179:7135-7155.
-
(1997)
J Bacteriol
, vol.179
, pp. 7135-7155
-
-
Smith, D.R.1
Doucette-Stamm, L.A.2
Deloughery, C.3
Lee, H.M.4
Dubois, J.5
Aldredge, T.6
Bashirzadeh, R.7
Blakely, D.8
Cook, R.9
Gilbert, K.10
-
34
-
-
0032561496
-
Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis
-
Stephens RS, Kalman S, Lammel C, Fan J, Marathe R, Aravind L, Mitchel W, Olinger L, Tatusov RL, Zhao Q, et al. 1998. Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science 282: 754-759.
-
(1998)
Science
, vol.282
, pp. 754-759
-
-
Stephens, R.S.1
Kalman, S.2
Lammel, C.3
Fan, J.4
Marathe, R.5
Aravind, L.6
Mitchel, W.7
Olinger, L.8
Tatusov, R.L.9
Zhao, Q.10
-
35
-
-
0026716643
-
Membrane protein structure prediction Hydrophobicity analysis and the positive-inside rule
-
von Heijne G. 1992. Membrane protein structure prediction Hydrophobicity analysis and the positive-inside rule. J Mol Biol 225:487-494.
-
(1992)
J Mol Biol
, vol.225
, pp. 487-494
-
-
Von Heijne, G.1
-
36
-
-
0029108665
-
Membrane-protein assembly - Rules of the game
-
von Heijne G. 1995. Membrane-protein assembly - Rules of the game. Bioessays 17:25-30.
-
(1995)
Bioessays
, vol.17
, pp. 25-30
-
-
Von Heijne, G.1
-
37
-
-
0030835739
-
The complete genome sequence of the gastric pathogen helicobacter pylon
-
White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, Ketchum KA, Klenk HP, Gill S, Dougherty BA, Nelson K, et al. 1997. The complete genome sequence of the gastric pathogen Helicobacter pylon. Nature 388:539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
White, O.1
Kerlavage, A.R.2
Clayton, R.A.3
Sutton, G.G.4
Fleischmann, R.D.5
Ketchum, K.A.6
Klenk, H.P.7
Gill, S.8
Dougherty, B.A.9
Nelson, K.10
-
38
-
-
0032987478
-
Membrane protein folding and stability: Physical principles
-
White SH, Wimley WC. 1999. Membrane protein folding and stability: Physical principles. Annu Rev Biophys Biomol Struct 28:319-365.
-
(1999)
Annu Rev Biophys Biomol Struct
, vol.28
, pp. 319-365
-
-
White, S.H.1
Wimley, W.C.2
-
39
-
-
0029921620
-
A 12-residue-long polyleucine tail is sufficient to anchor synaptobrevin to the endoplasmic reticulum membrane
-
Whitley P, Grahn E, Kutay IT, Rapoport TA, von Heijne G. 1996. A 12-residue-long polyleucine tail is sufficient to anchor synaptobrevin to the endoplasmic reticulum membrane. J Biol Chem 271:7583-7586.
-
(1996)
J Biol Chem
, vol.271
, pp. 7583-7586
-
-
Whitley, P.1
Grahn, E.2
Kutay, I.T.3
Rapoport, T.A.4
Von Heijne, G.5
|