Identification of white truffle species using RAPD markers

Plant and Soil

Volumn 219, Issue 1-2, 2000, Pages 127-133

  Rossi, I ^a   Bartolacci, B ^a   Potenza, L ^a   Bertini, L ^a   Barbieri, E ^a   Stocchi, V ^a  

^a UNIVERSITY OF URBINO   (Italy)

Author keywords

Fruit body ectomycorrhiza mycelium; RAPD analysis; White truffles

Indexed keywords

FUNGUS; GENETIC ANALYSIS; IDENTIFICATION METHOD;

FUNGI; TUBER (GENUS); TUBER (TRUFFLE);

EID: 0034071358     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1023/a:1004792528164     Document Type: Article

References (36)

1. Amicucci A, Rossi I, Potenza L, Zambonelli A, Agostini D, Palma F and Stocchi V 1996 Identification of ectomycorrhizae from Tuber species by RFLP analysis of the ITS region. Biotechnol. Lett. 18, 831-836.
2. Amicucci A, Rossi I, Potenza L, Zambonelli A, Agostini D and Stocchi V 1997 Use of sequence characterised amplified region and RAPD markers in the identification of the white truffle Tuber magnatum Pico. Biotechnol. Tech. 11, 149-154.
3. Amicucci A, Zambonelli A, Giomaro G, Potenza L and Stocchi V 1998 Identification of mycorrhizal fungi of the genus Tuber by species-specific ITS primers. Mol. Eco. 7, 273-277.
4. Bertini L, Agostini D, Potenza L, Rossi I, Zeppa S, Zambonelli A and Stocchi V 1998 Molecular markers for the identification of the ectomycorrhizal fungus Tuber borchii. New Phytol. 139, 565-570 (a).
5. Bertini L, Potenza L, Zambonelli A, Amicucci A and Stocchi V 1998 Restriction fragment length polymorphism species-specific patterns in the identification of white truffles. F.E.M.S. Microbiol. Lett. 164, 397-401 (b).
6. Bidochka M J, McDonald M A, St.Leger R J and Roberts D W 1994 Differentiation of species and strains of entomopathogenic fungi by random amplification of polymorphic DNA (RAPD). Curr. Genet. 25, 107-113.
7. Bruns T D 1991 Fungal molecular systematics. Ann. Rev. Ecol. Syst. 22, 525-564.
8. Bruns T D and Gardes M 1993 Molecular tools for the identification of ectomycorrhizal fungi-taxon-specific oligonucleotide probes for suilloid fungi. Mol. Ecol. 2, 233-242.
9. Castiglione S, Wang G, Damiani G, Bandi C, Bisoffi S and Sala F 1993 RAPD fingerprints for identification and for taxonomic studies of elite poplar (Populus spp.) clones. Theor. Appl. Genet. 87, 54-59.
10. Erland S, Henrion B, Martin F, Glover L A and Alexander IJ 1993 Identification of the ectomycorrhizal basidiomycete Tylospora fibrillosa Donk by RFLP analysis of the PCR-amplified ITS and IGS regions of ribosomal DNA. New Phytol. 126, 525-532.
11. Fontana A 1967 Sintesi micorrizica tra Pinus strobus e Tuber maculatum. Giornale Botanico Italiano. 101, 298.
12. Fontana A 1968 Miceli di funghi ipogei in coltura pura. In Atti del Io Congresso Internazionale sul Tartufo - Spoleto, 24-25 maggio. pp 3-10.
13. Gandeboeuf D, Dupre C, Roeckel-Drevet P, Nicolas P and Chevalier G 1997 Typing Tuber ectomycorrhizae by polymerase chain amplification of the internal transcribed spacer of rDNA and the sequence characterized amplified region markers. Can. J. Microbiol. 43, 723-8.
14. Gardes M, White T J, Fortin J A, Bruns T D and Taylor J W 1991 Identification of indigenous and introduced symbiotic fungi in ectomycorrhizas by amplification of nuclear and mitochondrial ribosomal DNA. Can. J. Bot. 69, 180-190.
15. Gardes M and Bruns T D 1993 ITS primers with enhanced specificity for Basidiomycetes-application to the identification of mycorrhizas and rust. Mol. Ecol. 2, 113-118.
16. Harley J L and Smith SE 1993 Mycorrhizal symbiosis. Academic Press London, UK.
17. Henrion B, Chevalier G and Martin F 1994 Typing truffle species by PCR amplification of the ribosomal DNA spacers. Mycol. Res. 98, 37-43.
18. Lanfranco L, Wyss P, Marzachì C and Bonfante P 1993 DNA probes for identification of the ectomycorrhizal fungus Tuber magnatum Pico. F.E.M.S. Microbiol. Lett. 114, 245-252.
19. Lee S B and Taylor J W 1990 Isolation of DNA from fungal mycelia and single spores. In PCR Protocols: A Guide to Methods and Applications. Eds MA Innis, DH Gelfand, JJ Sninsky and TJ White. pp 282-287. Academic Press London, UK, New York, USA.
20. Longato S and Bonfante P 1997 Molecular identification of mycorrhizal fungi by direct amplification of microsatellite regions. Mycol. Res. 4, 425-432.
21. McDermott J M, Brändle U, Dutly F, Haemmerli U A, Keller S, Müller E and Wolfe M S 1994 Genetic variation in powdery mildew of barley: development of RAPD, SCAR and VNTR markers. Phytopathology 84, 1316-1321.
22. Mello A, Nosenzo C, Meotto F and Bonfante P 1996 Rapid typing of truffle mycorrhizal roots by PCR amplification of the ribosomal DNA spacers. Mycorrhiza 6, 417-421.
23. Mello A, Garnero L, Meotto F and Bonfante P 1998 Specific primers for rapid typing of Tuber borchii mycorrhizal roots. Acta Hort. 457, 229-233.
24. Mello A, Garnero L and Bonfante P 1999 Specific PCR-primers as a reliable tool for the detection of white truffles in mycorrhizal roots. New Phytol. 141, 511-516.
25. Paolocci F, Cristofari E, Angelini P, Granetti B and Arcioni S 1995 The polymorphisms of the rDNA region in typing ascocarps and ectomycorrhizae of truffle species. In Biotechnology of Ectomycorrhizae: Molecular Approaches. Eds V Stocchi, P Bonfante and M Nuti. pp 171-182. Academic Press London.
26. Paolocci F, Rubini A, Granetti B and Arcioni S 1997 Typing Tuber melanosporum and Chinese black truffle species by molecular markers. F.E.M.S. Microbiol. Lett. 153, 255-260.
27. Paolocci F, Rubini A, Granetti B and Arcioni S 1999 Rapid molecular approach for a reliable identification of Tuber spp. ectomycorrhizae. F.E.M.S. Microbiol. Ecol. 28, 23-30.
28. Pegler D N, Spooner B M and Young T W K 1993 British Truffles. A Revision of British Hypogeous Fungi. Royal Botanic Garden, Kew.
29. Potenza L, Amicucci A, Rossi I, Palma F, De Bellis R, Cardoni P and Stocchi V 1994 Identification of Tuber magnatum Pico DNA markers by RAPD markers. Biotechnol. Tech. 8: 293-298.
30. Rossi I, Zeppa S, Potenza L, Sisti D, Zambonelli A and Stocchi V 1999 Intraspecific polymorphisms among Tuber borchii Vittad. mycelial strains. Symbiosis 26, 313-325.
31. Rubini A, Paolocci F, Granetti B and Arcioni S 1998 Single Step molecular characterization of morphologically similar black truffle species. F.E.M.S. Microbiol. Lett. 164, 7-12.
32. Schnell R J, Ronning C M and Knight R J 1995 Identification of cultivars and validation of genetic relationships in Mangifera indica L using RAPD markers. Theor. Appl. Genet. 90, 269-274.
33. Trappe J M 1979 The orders, families and genera of hypogeous ascomycotina (truffles and their relatives). Mycotaxon 9, 297.
34. White T J, Bruns T, Lee S and Taylor J 1990 Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocol: A Guide to Methods and Applications. Eds MA Innis, DH Gelfand, JJ Sninsky and TJ White. pp 315-322. Academic Press London, UK.
35. Williams J G K, Kubelik A R, Livak K J, Rafalski J A and Tingey S V 1990 DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18, 6531-6535.
36. Zambonelli A, Salomoni S and Pisi A 1993 Caratterizzazione anatomomorfologica delle micorrize di Tuber spp. Su Quercus pubescens Willd. Micol Ital. 22, 73-79.