A homopolymer stretch composed of variable numbers of cytidine residues in the terminal repeats of infectious laryngotracheitis virus

Avian Diseases

Volumn 44, Issue 1, 2000, Pages 125-131

  Chang, Poa Chun ^a   Shieh, Happy K ^a   Shien, Jui Hung ^a   Kang, Sui Wei ^a  

^a NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

Author keywords

Homopolymer; Infectious laryngotracheitis virus; Nucleotide sequence; Polymerase chain reaction

Indexed keywords

CYTIDINE; DNA FRAGMENT; GENE SEQUENCING; GENETIC STRAIN; HOMOPOLYMER STRETCH; INFECTIOUS LARYNGOTRACHEITIS VIRUS; INVERTED TERMINAL REPEAT; POLYMERASE CHAIN REACTION; STRAIN DIFFERENCE; VACCINE STRAIN;

GALLID HERPESVIRUS 1; GALLUS GALLUS;

EID: 0034063723     PISSN: 00052086     EISSN: None     Source Type: Journal    
DOI: 10.2307/1592515     Document Type: Article

References (23)

1. Andreasen, J. R., Jr., J. R. Glisson, and P. Villegas. Differentiation of vaccine strains and Georgia field isolates of infectious laryngotracheitis virus by their restriction endonuclease fragment patterns. Avian Dis. 34:646-656. 1990.
2. Bagust, T. J., and J. S. Guy. Laryngotracheitis. In: Diseases of poultry, 10th ed. B. W. Calnek, H. J. Barnes, C. W. Beard, L. R. McDougald, and Y. M. Saif, eds. Iowa State University Press, Ames, IA. pp. 527-539. 1997.
3. Chang, P. C., Y. L. Lee, J. H. Shien, and H. K. Shieh. Rapid differentiation of vaccine strains and field isolates of infectious laryngotracheitis virus by restriction fragment length polymorphism of PCR products. J. Virol. Methods 66:179-186. 1997.
4. Clavijo, A., and E. Nagy. Differentiation of infectious laryngotracheitis virus strains by polymerase chain reaction. Avian Dis. 41:241-246. 1997
5. Griffin, A. M., and M. E. Boursnell. Analysis of the nucleotide sequence of DNA from the region of the thymidine kinase gene of infectious laryngotracheitis virus; potential evolutionary relationships between the herpesvirus subfamilies. J. Gen. Virol. 71:841-850. 1990.
6. Guy, J. S., H. J. Barnes, L. L. Munger, and L. Rose. Restriction endonuclease analysis of infectious laryngotracheitis viruses: comparison of modified-live vaccine viruses and North Carolina field isolates. Avian Dis. 33:316-323. 1989.
7. Guy, J. S., H. J. Barnes, and L. Smith. Increased virulence of modified-live infectious laryngotracheitis vaccine virus following bird-to-bird passage. Avian Dis. 35:348-355. 1991.
8. Hughes, C. S., R. A. Williams, R. M. Gaskell, F. T. Jordan, J. M. Bradbury, M. Bennett, and R. C. Jones. Latency and reactivation of infectious laryngotracheitis vaccine virus. Arch. Virol. 121:213-218. 1991.
9. Itakura, O., S. Yamada, M. Narita and H. Kikuta. High prevalence of a 30-base pair deletion and single-base mutations within the carboxy terminal end of the LMP-1 oncogene of Epstein-Bars virus in the Japanese population. Oncogene 13:1549-1553. 1996.
10. Johnson, M. A., C. T. Prideaux, K. Kongsuwan, M. Sheppard, and K. J. Fahey. Gallid herpesvirus 1 (infectious laryngotracheitis virus): cloning and physical maps of the SA-2 strain. Arch. Virol. 119:181-198. 1991.
11. Keeler, C. L., Jr., J. W. Hazel, J. E. Hastings, and J. K. Rosenberger. Restriction endonuclease analysis of Delmarva field isolates of infectious laryngotracheitis virus. Avian Dis. 37:418-426. 1993.
12. Keller, L. H., C. E. Benson, S. Davison, and R. J. Eckroade. Differences among restriction endonuclease DNA fingerprints of Pennsylvania field isolates, vaccine strains, and challenge strains of infectious laryngotracheitis virus. Avian Dis. 36:575-581. 1992.
13. Kongsuwan, K., M. A. Johnson, C. T. Prideaux, and M. Sheppard. Identification of an infectious laryngotracheitis virus gene encoding an immunogenic protein with a predicted M (r) of 32 kilodaltons. Virus Res. 29:125-140. 1993.
14. Kotiw, M., C. R. Wilks, and J. T. May. The effect of serial in vivo passage on the expression of virulence and DNA stability of an infectious laryngotracheitis virus strain of low virulence. Vet. Microbiol. 45:71-80. 1995.
15. Leib, D. A., J. M. Bradbury, C. A. Hart, and K. McCarthy. Genome isomerism in two alphaherpesviruses: herpesvirus saimiri-1 (Herpesvirus tamarinus) and avian infectious laryngotracheitis virus. Arch. Virol. 93:287-294. 1987.
16. Poulsen, D. J., C. R. Burton, J. J. O'Brian, S. J. Rabin, and C. L. Keeler, Jr. Identification of the infectious laryngotracheitis virus glycoprotein gB gene by the polymerase chain reaction. Virus Genes 5:335-347. 1991.
17. Robbins, C. M., E. Hsu, and P. M. Gillevet. Sequencing homopolymer tracts and repetitive elements. Biotechniques 20:862-868. 1996.
18. Sasadeusz, J. J., F. Tufaro, S. Safrin, K. Schubert, M. M. Hubinette, P. K. Cheung, and S. L. Sacks. Homopolymer mutational hot spots mediate herpes simplex virus resistance to acyclovir. J. Virol. 71:3872-3878. 1997.
19. Shieh, H. K., Y. W. Wen, S. W. Cheng, J. H. Shien, and L. H. Lee. Development and application of polymerase chain reaction on diagnosis of infectious laryngotracheitis. Taiwan J. Vet. Med. Anim. Husbandry 66:93-104. 1996.
20. Streisinger, G., and J. Owen. Mechanisms of spontaneous and induced frameshift mutation in bacteriophage T4. Genetics 109:633-659. 1985.
21. Tripathy, D. N., and L. E. Hanson. Laryngotracheitis. In: Isolation and identification of avian pathogens. S. B. Hitchner, C. H. Domermuth, H. G. Purchase, and J. E. Williams, eds. American Association of Avian Pathologists, College Station, TX. pp. 88-90. 1980.
22. Trist, H. M., S. G. Tyack, M. A. Johnson, C. T. Prideaux, and M. Sheppard. Comparison of the genomic short regions of a vaccine strain (SA-2) and a virulent strain (CSW-1) of infectious laryngotracheitis virus (Gallid herpesvirus I). Avian Dis. 40: 130-139. 1996.
23. Zong, J. C., C. Metroka, M. S. Reitz, J. Nicholas, and G. S. Hayward. Strain variability among Kaposi sarcoma-associated herpesvirus (human herpesvirus 8) genomes: evidence that a large cohort of United States AIDS patients may have been infected by a single common isolate. J. Virol. 71:2505-2511. 1997.