SCOPUS 정보 검색 플랫폼

Protein Engineering

Volumn 13, Issue 4, 2000, Pages 227-238

Deterministic features of side-chain main-chain hydrogen bonds in globular protein structures

(2) Eswar, Narayanan a Ramakrishnan, C a

a INDIAN INSTITUTE OF SCIENCE (India)

Author keywords

Accessibility; Conformation; Dihedral angles; Hydrogen bonds; Motifs; Side chains

Indexed keywords

AMIDE; CARBONYL DERIVATIVE; HYDROGEN; OXYGEN; PEPTIDE; POLYPEPTIDE; PROTEIN; SOLVENT;

ALPHA HELIX; ARTICLE; CARBOXY TERMINAL SEQUENCE; CRYSTAL STRUCTURE; HYDROGEN BOND; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN STRUCTURE; TORSION;

EID: 0034062925 PISSN: 02692139 EISSN: None Source Type: Journal
DOI: 10.1093/protein/13.4.227 Document Type: Article

Times cited : (88)

References (45)

1
- 0027524623
- Armstrong, K.M. and Baldwin, R.L. (1993) Proc. Natl Acad. Sci. USA, 90, 11337-11340.
- (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 11337-11340
- Armstrong, K.M.¹ Baldwin, R.L.²

2
- 0031917176
- Aurora, R. and Rose, G.D. (1998) Protein Sci., 7, 21-38.
- (1998) Protein Sci. , vol.7 , pp. 21-38
- Aurora, R.¹ Rose, G.D.²

3
- 0031038377
- Aurora, R., Creamer, T.P., Srinivasan, R. and Rose, G.D. (1997) J. Biol. Chem., 272, 1413-1416.
- (1997) J. Biol. Chem. , vol.272 , pp. 1413-1416
- Aurora, R.¹ Creamer, T.P.² Srinivasan, R.³ Rose, G.D.⁴

4
- 0021192240
- Baker, E.N. and Hubbard, R.E. (1984) Prog. Biophys. Mol. Biol., 44, 97-179.
- (1984) Prog. Biophys. Mol. Biol. , vol.44 , pp. 97-179
- Baker, E.N.¹ Hubbard, R.E.²

5
- 0017411710
- Bernstein, F.C., Koetzle, T.F., Williams, G.J.B., Meyer, E.F., Jr. Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T. and Tasumi, M. (1977) J. Mol. Biol., 112, 535-542.
- (1977) J. Mol. Biol. , vol.112 , pp. 535-542
- Bernstein, F.C.¹ Koetzle, T.F.² Williams, G.J.B.³ Meyer E.F., Jr.⁴ Brice, M.D.⁵ Rodgers, J.R.⁶ Kennard, O.⁷ Shimanouchi, T.⁸ Tasumi, M.⁹

6
- 0027988211
- Bordo, D. and Argos, P. (1994) J. Mol. Biol., 243, 504-519.
- (1994) J. Mol. Biol. , vol.243 , pp. 504-519
- Bordo, D.¹ Argos, P.²

7
- 0031576989
- Bower, M.J., Cohen, F.E. and Dunbrack, R.L., Jr (1997) J. Mol. Biol., 267, 1268-1282.
- (1997) J. Mol. Biol. , vol.267 , pp. 1268-1282
- Bower, M.J.¹ Cohen, F.E.² Dunbrack R.L., Jr.³

8
- 0031842913
- Chakrabarti, P. and Pal, D. (1998) Protein Engng, 11, 631-647.
- (1998) Protein Engng , vol.11 , pp. 631-647
- Chakrabarti, P.¹ Pal, D.²

9
- 0017187836
- Chothia, C. (1976) J. Mol. Biol. 105, 1-14.
- (1976) J. Mol. Biol. , vol.105 , pp. 1-14
- Chothia, C.¹

10
- 0025370815
- Dill, K.A. (1990) Biochemistry, 29, 7133-7155.
- (1990) Biochemistry , vol.29 , pp. 7133-7155
- Dill, K.A.¹

11
- 0031021758
- Doig, A.J., MacArthur, M.W., Stapley, B.J. and Thornton, J.M. (1997) Protein Sci., 6, 147-155.
- (1997) Protein Sci. , vol.6 , pp. 147-155
- Doig, A.J.¹ MacArthur, M.W.² Stapley, B.J.³ Thornton, J.M.⁴

12
- 0027160197
- Dunbrack, R.L., Jr and Karplus, M. (1993) J. Mol. Biol., 230, 543-574.
- (1993) J. Mol. Biol. , vol.230 , pp. 543-574
- Dunbrack R.L., Jr.¹ Karplus, M.²

13
- 0033061876
- Eswar, N. and Ramakrishnan, C. (1999) Protein Engng, 12, 447-455.
- (1999) Protein Engng , vol.12 , pp. 447-455
- Eswar, N.¹ Ramakrishnan, C.²

14
- 0032488824
- Gunasekaran, K., Nagarajaram, H.A., Ramakrishnan, C. and Balaram, P. (1998) J. Mol. Biol., 275, 917-932.
- (1998) J. Mol. Biol. , vol.275 , pp. 917-932
- Gunasekaran, K.¹ Nagarajaram, H.A.² Ramakrishnan, C.³ Balaram, P.⁴

15
- 0025115609
- Ippolito, J.A., Alexander, R.S. and Christianson, D.W. (1990) J. Mol. Biol., 215, 457-471.
- (1990) J. Mol. Biol. , vol.215 , pp. 457-471
- Ippolito, J.A.¹ Alexander, R.S.² Christianson, D.W.³

16
- 0020997912
- Kabsch, W. and Sander, C. (1983) Biopolymers, 22, 2577-2637.
- (1983) Biopolymers , vol.22 , pp. 2577-2637
- Kabsch, W.¹ Sander, C.²

17
- 0030010605
- Karplus, P.A. (1996) Protein Sci., 5, 1406-1420.
- (1996) Protein Sci. , vol.5 , pp. 1406-1420
- Karplus, P.A.¹

18
- 0001339532
- Kraulis, P.J. (1991) J. Appl. Crystallogr., 24, 946-950.
- (1991) J. Appl. Crystallogr. , vol.24 , pp. 946-950
- Kraulis, P.J.¹

19
- 0015222647
- Lee, B. and Richards, F.M. (1971) J. Mol. Biol., 55, 379-400.
- (1971) J. Mol. Biol. , vol.55 , pp. 379-400
- Lee, B.¹ Richards, F.M.²

20
- 0025260032
- Lyu, P.C., Liff, M.I., Marky, L.A. and Kallenbach, N.R. (1990) Science, 250, 669-673.
- (1990) Science , vol.250 , pp. 669-673
- Lyu, P.C.¹ Liff, M.I.² Marky, L.A.³ Kallenbach, N.R.⁴

21
- 0029017638
- McDonald, I.K. and Thornton, J.M. (1994a) Protein Engng, 8, 217-224.
- (1994) Protein Engng , vol.8 , pp. 217-224
- McDonald, I.K.¹ Thornton, J.M.²

22
- 0028304962
- McDonald, I.K. and Thornton, J.M. (1994b) J. Mol. Biol., 238, 777-793.
- (1994) J. Mol. Biol. , vol.238 , pp. 777-793
- McDonald, I.K.¹ Thornton, J.M.²

23
- 0023521842
- McGregor, M.J., Islam, S.A. and Sternberg, M.J.E. (1987) J. Mol. Biol., 198, 295-310.
- (1987) J. Mol. Biol. , vol.198 , pp. 295-310
- McGregor, M.J.¹ Islam, S.A.² Sternberg, M.J.E.³

24
- 0023645203
- Miller, S., Janin, J., Lesk, A.M. and Chothia, C. (1987) J. Mol. Biol., 196, 641-656.
- (1987) J. Mol. Biol. , vol.196 , pp. 641-656
- Miller, S.¹ Janin, J.² Lesk, A.M.³ Chothia, C.⁴

25
- 0025690309
- Milner-White, E.J. (1990) J. Mol. Biol., 216, 385-397.
- (1990) J. Mol. Biol. , vol.216 , pp. 385-397
- Milner-White, E.J.¹

26
- 0017396306
- Mitra, J. and Ramakrishnan, C. (1977) Int. J. Peptide Protein Res., 9, 27-48.
- (1977) Int. J. Peptide Protein Res. , vol.9 , pp. 27-48
- Mitra, J.¹ Ramakrishnan, C.²

27
- 0019553988
- Mitra, J. and Ramakrishnan, C. (1981) Int. J. Peptide Protein Res., 17, 401-411.
- (1981) Int. J. Peptide Protein Res. , vol.17 , pp. 401-411
- Mitra, J.¹ Ramakrishnan, C.²

28
- 0000646404
- Nataraj, D.V., Srinivasan, N., Sowdhamini, R. and Ramakrishnan, C. (1995) Curr. Sci. (India), 69, 434-447.
- (1995) Curr. Sci. (India) , vol.69 , pp. 434-447
- Nataraj, D.V.¹ Srinivasan, N.² Sowdhamini, R.³ Ramakrishnan, C.⁴

29
- 0033582944
- Penel, S., Hughes, E. and Doig, A.J. (1999) J. Mol. Biol., 287, 127-143.
- (1999) J. Mol. Biol. , vol.287 , pp. 127-143
- Penel, S.¹ Hughes, E.² Doig, A.J.³

30
- 0027327319
- Questal, J.L., Morris, D.G., Maccallum, P.H., Poet, R. and Milner-White, E.J. (1993) J. Mol. Biol., 231, 888-896.
- (1993) J. Mol. Biol. , vol.231 , pp. 888-896
- Questal, J.L.¹ Morris, D.G.² Maccallum, P.H.³ Poet, R.⁴ Milner-White, E.J.⁵

31
- 73649194755
- Ramachandran, G.N., Ramakrishnan, C. and Sasisekharan, V. (1963) J. Mol. Biol., 7, 95-99.
- (1963) J. Mol. Biol. , vol.7 , pp. 95-99
- Ramachandran, G.N.¹ Ramakrishnan, C.² Sasisekharan, V.³

32
- 0013815214
- Ramakrishnan, C. and Ramachandran, G.N. (1965) Biophy. J., 5, 909-933.
- (1965) Biophy. J. , vol.5 , pp. 909-933
- Ramakrishnan, C.¹ Ramachandran, G.N.²

33
- 0015173698
- Ramakrishnan, C. and Prasad, N. (1971) Int. J. Peptide Protein Res., 3, 209-231.
- (1971) Int. J. Peptide Protein Res. , vol.3 , pp. 209-231
- Ramakrishnan, C.¹ Prasad, N.²

34
- 0029849612
- Ramakrishnan, C., Srinivasan, N. and Nataraj, D. V. (1996) Int. J. Peptide Protein Res., 48, 420-428.
- (1996) Int. J. Peptide Protein Res. , vol.48 , pp. 420-428
- Ramakrishnan, C.¹ Srinivasan, N.² Nataraj, D.V.³

35
- 0001810769
- Fasman, G.D. (ed.). Plenum, New York
- Richardson, J.S. and Richardson, D.C. (1989) In Fasman, G.D. (ed.), Prediction of Protein Structure and the Principles of Protein Conformation. Plenum, New York, pp. 1-98.
- (1989) Prediction of Protein Structure and the Principles of Protein Conformation , pp. 1-98
- Richardson, J.S.¹ Richardson, D.C.²

36
- 0019443447
- Richardson, J.S. and Richardson, D.C. (1981) Adv. Protein Chem., 34, 167-339.
- (1981) Adv. Protein Chem. , vol.34 , pp. 167-339
- Richardson, J.S.¹ Richardson, D.C.²

37
- 0027208112
- Schrauber, H., Eisenhaber, F. and Argos, P. (1993) J. Mol. Biol., 230, 592-612.
- (1993) J. Mol. Biol. , vol.230 , pp. 592-612
- Schrauber, H.¹ Eisenhaber, F.² Argos, P.³

38
- 0026487174
- Stickle, D.F., Presta, L.G., Dill, K.A. and Rose, G.D. (1992) J. Mol. Biol., 226, 1143-1159.
- (1992) J. Mol. Biol. , vol.226 , pp. 1143-1159
- Stickle, D.F.¹ Presta, L.G.² Dill, K.A.³ Rose, G.D.⁴

39
- 0029063337
- Stites, W.E. and Pranata, J. (1995) Proteins Struct. Funct. Genet., 22, 132-140.
- (1995) Proteins Struct. Funct. Genet. , vol.22 , pp. 132-140
- Stites, W.E.¹ Pranata, J.²

40
- 0014347799
- Venkatachalam, C.M. (1968) Biopolymers, 6, 1425-1436.
- (1968) Biopolymers , vol.6 , pp. 1425-1436
- Venkatachalam, C.M.¹

41
- 0033104768
- Vijayakumar, M., Qian, H. and Zhou, H. (1999) Proteins Struct. Funct. Genet., 34, 497-507.
- (1999) Proteins Struct. Funct. Genet. , vol.34 , pp. 497-507
- Vijayakumar, M.¹ Qian, H.² Zhou, H.³

42
- 0033548459
- Wan, W. and Milner-White, E.J. (1999a) J. Mol. Biol., 286, 1633-1649.
- (1999) J. Mol. Biol. , vol.286 , pp. 1633-1649
- Wan, W.¹ Milner-White, E.J.²

43
- 0033548705
- Wan, W. and Milner-White, E.J. (1999b) J. Mol. Biol., 286, 1651-1662.
- (1999) J. Mol. Biol. , vol.286 , pp. 1651-1662
- Wan, W.¹ Milner-White, E.J.²

44
- 0024279235
- Wilmot, C.M. and Thornton, J.M. (1988) J. Mol. Biol., 203, 221-232.
- (1988) J. Mol. Biol. , vol.203 , pp. 221-232
- Wilmot, C.M.¹ Thornton, J.M.²

45
- 0030959998
- Wilson, D.R. and Finlay, B.B. (1997) Protein Engng, 10, 519-529.
- (1997) Protein Engng , vol.10 , pp. 519-529
- Wilson, D.R.¹ Finlay, B.B.²

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