PNAD-CSS: A workbench for constructing a protein name abbreviation dictionary

Bioinformatics

Volumn 16, Issue 2, 2000, Pages 169-175

  Yoshida, Mikio ^a   Fukuda, Ken Ichiro ^a   Takagi, Toshihisa ^a  

^a THE UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ARTICLE; DATA BASE; NOMENCLATURE; PRIORITY JOURNAL; PROTEIN ANALYSIS;

EID: 0034062878     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.2.169     Document Type: Article

References (11)

1. Andrade, M.A. and Valencia, A. (1998) Automatic extraction of keywords from scientific text: application to the knowledge domain of protein families. Bioinformatics, 14, 600-607.
2. Baeza-Yates, R.A. (1992) Information retrieval data structures & algorithms. In Frakes, W.B. and Baeza-Yates, R.A. (eds), Introduction to Data Structures and Algorithms Related to Information Retrieval. Prentice Hall, New Jersey, pp. 13-27.
3. Fukuda, K., Tamura, A., Tsunoda, T. and Takagi, T. (1998) Toward information extraction identifying protein names from biological, papers. In Proceedings of the Pacific Symposium on Biocomputing '98, pp. 707-718.
4. EXbook. Addison-Wesley, Massachusetts.
5. NLM, (1998) PubMed NLM's search searvice. http://www.ncbi. nlm.nih.gov/PubMed/. National Library of Medicine.
6. Ohta, Y., Yamamoto. Y., Okazaki, T., Uchiyama, I. and Takagi, T. (1997) Automatic construction of knowledge base from biological papers. In Proceedings of the ISMB-97, 5, 218-225.
7. Reid, T. (1998) In Wood, R. (ed.), Trend in GENETICS: Genetic Nomenclature Guide Elsevier Trends Journals, Cambridge.
8. Schulze-Kremer, S. (1998) Ontologies for molecular biology. In Proceedings of the Pacific Sypmosium on Biocomputing '98, pp. 695-706.
9. Smadja, F. (1993) Retrieving collocations from text: xtract. Computational Linguistics, 19 (1).
10. Su, K., Wu, M. and Chang, J. (1994) A corpus-based approach to automatics compound extraction. In Proceedings of the 32th Annual Meeting of the Association for Computational Linguistics (ACL'94).
11. Wall, L., Christiansen, T. and Schwartz, R. (1996) Programming Perl. 2nd edn, O'Reilly & Associates.