The crystal structure and mechanism of orotidine 5′-monophosphate decarboxylase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 97, Issue 5, 2000, Pages 2005-2010

  Appleby, Todd C ^a   Kinsland, Cynthia ^a   Begley, Tadhg P ^a   Ealick, Steven E ^a  

^a Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOXYLIC ACID DERIVATIVE; DIMER; MONOMER; OROTIDINE 5' PHOSPHATE DECARBOXYLASE; PYRIMIDINE; TRIOSEPHOSPHATE ISOMERASE; URIDINE PHOSPHATE;

ARTICLE; BACILLUS SUBTILIS; CATALYSIS; CHEMICAL BOND; CRYSTAL STRUCTURE; DECARBOXYLATION; ENZYME ACTIVE SITE; ENZYME MECHANISM; ENZYME SUBSTRATE; NONHUMAN; PRIORITY JOURNAL; X RAY DIFFRACTION;

AMINO ACID SEQUENCE; BACILLUS SUBTILIS; CATALYSIS; CRYSTALLOGRAPHY, X-RAY; GENE EXPRESSION; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OROTIDINE-5'-PHOSPHATE DECARBOXYLASE; PROTEIN STRUCTURE, SECONDARY;

BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS);

EID: 0034058368     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.259441296     Document Type: Article

References (38)

1. Radzicka, A. & Wolfenden, R. (1995) Science 267, 90-93.
2. Cui, W., DeWitt, J. G., Miller, S. M. & Wu, W. (1999) Biochem. Biophys. Res. Commun. 259, 133-135.
3. O'Leary, M. H. (1992) in The Enzymes, ed. Sigman, D. S. (Academic, San Diego), Vol. 20, pp. 235-269.
4. Beak, P. & Siegel, B. (1976) J. Am. Chem. Soc. 98, 3601-3606.
5. Lee, J. K. & Houk, K. N. (1997) Science 276, 942-945.
6. Chen, J., McAllister, M. A., Lee J. K. & Houk, K. N. (1998) J. Org. Chem. 63, 4611-4619.
7. Nakanishi, M. P. & Wu, W. (1998) Tetrahedron Lett. 39, 6271-6272.
8. Shostak, K. & Jones, M. E. (1992) Biochemistry 31, 12155-12161.
9. Silverman, R. B. & Groziak, M. P. (1982) J. Am. Chem. Soc. 104, 6434-6439.
10. Acheson, S. A., Bell, J. B., Jones, M. E. & Wolfenden, R. (1990) Biochemistry 29, 3198-3202.
11. Bradford, M. (1976) Anal. Biochem. 72, 248-254.
12. Turnbough, C. L., Jr., Kerr, K. H., Funderburg, W. R., Donahue, J. P. & Powell, F. E. (1987) J. Biol. Chem. 262, 10239-10245.
13. Stanton, M., Philips, W. C., O'Mara, D., Naday, I. & Westbrook, E. (1993) Nucl. Instrum. Methods Phys. Res. Sect. A 325, 558-567.
14. Otwinowski, Z. & Minor, W. (1997) Methods Enzymol. 276, 307-326.
15. Hendrickson, W. A. (1991) Science 254, 51-58.
16. Blessing, R. H., Guo, D. Y. & Langs, D. A. (1997) in Direct Methods for Solving Macromolecular Structures, ed. Fortier, S. (Kluwer, Dordrecht, The Netherlands).
17. Hauptman, H. A. (1991) in Crystallographic Computing 5: From Chemistry to Biology, ed. Moras, D., Podnarny, A. D. & Thierry, J. C. (Oxford Univ. Press, Oxford), pp. 324-332.
18. Miller, R., Gallo, S. M., Khalak, H. G. & Weeks, C. M. (1994) J. Appl. Crystallogr. 27, 613-621.
19. Otwinowski, Z. (1991) in Isomorphous Replacement and Anomalous Scattering, eds. Wolf, W., Evans, P. R. & Leslie, A. G. W. (SERC Proceedings, Daresbury Laboratories, Warrington, U.K.), pp. 80-88.
20. Cowtan, K. (1994) Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography 31, 34-38.
21. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. (1991) Acta Crystallogr. A 47, 110-119.
22. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., et al (1998) Acta Crystallogr. D 54, 905-921.
23. Luzzati, P. V. (1952) Acta Crystallogr. 5, 802-810.
24. Laskowski, R. A., MacAuthur, M. W., Moss, D. S. & Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
25. Banner, D. W., Bloomer, A. C., Petsko, G. A., Phillips, D. C. & Wilson, I. A. (1976) Biochem. Biophys. Res. Commun. 72, 146-155.
26. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
27. Holm, L. & Sander, C. (1993) J. Mol. Biol. 233, 123-138.
28. Saenger, W. (1984) in Principles of Nucleic Acid Structure, ed. Cantor, C. R. (Springer, New York), pp. 51-104.
29. Carson, M. (1991) J. Appl. Crystallogr. 24, 958-961.
30. Smiley, J. A. & Jones, M. E. (1992) Biochemistry 31, 12162-12168.
31. Wolfenden, R., Snider, M., Ridgway, C. & Miller, B. (1999) J. Am. Chem. Soc. 121, 7419-7420.
32. Fukuto, J. M. & Jensen, F. R. (1983) Acc. Chem. Res. 16, 177-184.
33. Levine, H. L., Brody, R. S. & Westheimer, F. H. (1980) Biochemistry 19, 4993-4999.
34. Miller, B. G., Traut, T. W. & Wolfenden, R. (1998) Bioorg. Chem. 26, 283-288.
35. Smiley, J. A., Paneth, P., O'leary, M. H., Bell, J. B. & Jones, M. E. (1991) Biochemistry 30, 6216-6223.
36. Ehrlich, J. I., Hwang, C.-C., Cook, P. F. & Blanchard, J. S. (1999) J. Am. Chem. Soc. 121, 6966-6967.
37. Begley, T. P., Walts, A. E. & Walsh, C. T. (1986) Biochemistry 25, 7192-7200.
38. Thauer, R. K., Klein, A. R. & Hartmann, G. C. (1996) Chem. Rev. 96, 3031-3042.