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Volumn 13, Issue 2, 2000, Pages 63-71

Altered electrophoretic migration of polycyclic aromatic hydrocarbon and styrene oxide adducts at adenine N6 correlates with adduct-induced structural disorder

Author keywords

[No Author keywords available]

Indexed keywords

DNA; POLYCYCLIC AROMATIC HYDROCARBON; STYRENE OXIDE;

EID: 0034055061     PISSN: 0893228X     EISSN: None     Source Type: Journal    
DOI: 10.1021/tx990140q     Document Type: Article
Times cited : (7)

References (52)
  • 1
    • 0017815884 scopus 로고
    • Some current perspectives on chemical carcinogenesis in humans and experimental animals: Presidential address
    • Miller, E. C. (1978) Some current perspectives on chemical carcinogenesis in humans and experimental animals: Presidential address. Cancer Res. 38, 1479-1496.
    • (1978) Cancer Res. , vol.38 , pp. 1479-1496
    • Miller, E.C.1
  • 2
    • 0014757218 scopus 로고
    • Carcinogenesis by chemicals: An overview -G.H.A. Clowes memorial lecture
    • Miller, J. A. (1970) Carcinogenesis by chemicals: An overview -G.H.A. Clowes memorial lecture. Cancer Res. 30, 559-576.
    • (1970) Cancer Res. , vol.30 , pp. 559-576
    • Miller, J.A.1
  • 5
    • 0028227965 scopus 로고
    • Cisplatin-DNA adducts are molecular decoys for the ribosomal RNA transcription factor hUBF (human upstream binding factor)
    • Treiber, D. K., Zhai, X., Jantzen, H. M., and Essigmann, J. M. (1994) Cisplatin-DNA adducts are molecular decoys for the ribosomal RNA transcription factor hUBF (human upstream binding factor). Proc. Natl. Acad. Sci. U.S.A. 91, 5672-5676.
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 5672-5676
    • Treiber, D.K.1    Zhai, X.2    Jantzen, H.M.3    Essigmann, J.M.4
  • 6
    • 0028784624 scopus 로고
    • Interaction of the UvrABC nuclease system with a DNA duplex containing a single stereoisomer of dG-(+)-or dG-(-)-anti-BPDE
    • Zou, Y., Liu, T. M., Geacintov, N. E., and Van Houten, B. (1995) Interaction of the UvrABC nuclease system with a DNA duplex containing a single stereoisomer of dG-(+)-or dG-(-)-anti-BPDE. Biochemistry 34, 13582-13593.
    • (1995) Biochemistry , vol.34 , pp. 13582-13593
    • Zou, Y.1    Liu, T.M.2    Geacintov, N.E.3    Van Houten, B.4
  • 7
    • 0030657472 scopus 로고    scopus 로고
    • Base pair conformation-dependent excision of benzo-[α]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes
    • Hess, M. T., Gunz, D., Luneva, N., Geacintov, N. E., and Naegeli, H. (1997) Base pair conformation-dependent excision of benzo-[α]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes. Mol. Cell. Biol 17, 7069-7076.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 7069-7076
    • Hess, M.T.1    Gunz, D.2    Luneva, N.3    Geacintov, N.E.4    Naegeli, H.5
  • 8
    • 0024375698 scopus 로고
    • DNA bending by the bulge defect
    • Rice, J. A., and Crothers, D. M. (1989) DNA bending by the bulge defect. Biochemistry 28, 4512-4516.
    • (1989) Biochemistry , vol.28 , pp. 4512-4516
    • Rice, J.A.1    Crothers, D.M.2
  • 9
    • 0001690587 scopus 로고
    • Deletions of bases in one strand of duplex DNA, in contrast to single-base mismatches, produce highly kinked molecules: Possible relevance to the folding of single-stranded nucleic acids
    • Hsieh, C.-H., and Griffith, J. D. (1989) Deletions of bases in one strand of duplex DNA, in contrast to single-base mismatches, produce highly kinked molecules: Possible relevance to the folding of single-stranded nucleic acids. Proc. Natl. Acad. Sci. U.S.A. 86, 4833-4837.
    • (1989) Proc. Natl. Acad. Sci. U.S.A. , vol.86 , pp. 4833-4837
    • Hsieh, C.-H.1    Griffith, J.D.2
  • 10
    • 0025802093 scopus 로고
    • Effects of bulge composition and flanking sequence on the kinking of DNA by bulged bases
    • Wang, Y.-H., and Griffith, J. (1991) Effects of bulge composition and flanking sequence on the kinking of DNA by bulged bases. Biochemistry 30, 1358-1363.
    • (1991) Biochemistry , vol.30 , pp. 1358-1363
    • Wang, Y.-H.1    Griffith, J.2
  • 11
    • 0026634020 scopus 로고
    • Solution structure of a trinucleotide A-T-A bulge loop within a DNA duplex
    • Rosen, M. A., Shapiro, L., and Patel, D. J. (1992) Solution structure of a trinucleotide A-T-A bulge loop within a DNA duplex. Biochemistry 31, 4015-4026.
    • (1992) Biochemistry , vol.31 , pp. 4015-4026
    • Rosen, M.A.1    Shapiro, L.2    Patel, D.J.3
  • 12
    • 0027171122 scopus 로고
    • Correlation of DNA sequence specificity of anthramycin and tomaymycin with reaction kinetics and bending of DNA
    • Kizu, R., Draves, P., and Hurley, L. H. (1993) Correlation of DNA sequence specificity of anthramycin and tomaymycin with reaction kinetics and bending of DNA. Biochemistry 32, 8712-8722.
    • (1993) Biochemistry , vol.32 , pp. 8712-8722
    • Kizu, R.1    Draves, P.2    Hurley, L.H.3
  • 13
    • 0026069617 scopus 로고
    • (+)-CC-1065 produces bending of DNA that appears to resemble adenine/thymine tracts
    • Lin, C. H., Sun, D., and Hurley, L. H. (1991) (+)-CC-1065 produces bending of DNA that appears to resemble adenine/thymine tracts. Chem. Res. Toxicol. 4, 21-26.
    • (1991) Chem. Res. Toxicol. , vol.4 , pp. 21-26
    • Lin, C.H.1    Sun, D.2    Hurley, L.H.3
  • 14
    • 0029877328 scopus 로고    scopus 로고
    • Bending of DNA by the mitomycin C-induced, GpG intrastrand cross-link
    • Rink, S. M., Lipman, R., Alley, S. C., Hopkins, P. B., and Tomasz, M. (1996) Bending of DNA by the mitomycin C-induced, GpG intrastrand cross-link. Chem. Res. Toxicol. 9, 382-389.
    • (1996) Chem. Res. Toxicol. , vol.9 , pp. 382-389
    • Rink, S.M.1    Lipman, R.2    Alley, S.C.3    Hopkins, P.B.4    Tomasz, M.5
  • 15
    • 0027485725 scopus 로고
    • DNA conformation change produced by the site-specific interstrand cross-link of trans-diamminedichloroplatinum(II)
    • Brabec, V., Sip, M., and Leng, M. (1993) DNA conformation change produced by the site-specific interstrand cross-link of trans-diamminedichloroplatinum(II). Biochemistry 32, 11676-11681.
    • (1993) Biochemistry , vol.32 , pp. 11676-11681
    • Brabec, V.1    Sip, M.2    Leng, M.3
  • 16
    • 0025193776 scopus 로고
    • 6-Methylguanine and A:C and G:T mismatches cause asymmetric structural defects in DNA that are affected by DNA sequence
    • 6-Methylguanine and A:C and G:T mismatches cause asymmetric structural defects in DNA that are affected by DNA sequence. Biochemistry 29, 5012-5018.
    • (1990) Biochemistry , vol.29 , pp. 5012-5018
    • Voight, J.M.1    Topal, M.D.2
  • 17
    • 0024974630 scopus 로고
    • The DNA bending by acetylaminofluorene residues and by apurinic sites
    • Schwartz, A., Marrot, L., and Leng, M. (1989) The DNA bending by acetylaminofluorene residues and by apurinic sites. J. Mol. Biol. 207, 445-450.
    • (1989) J. Mol. Biol. , vol.207 , pp. 445-450
    • Schwartz, A.1    Marrot, L.2    Leng, M.3
  • 19
    • 0027093114 scopus 로고
    • Differences in unwinding of supercoiled DNA induced by the two enantiomers of anti-benzo[α]pyrene diol epoxide
    • Xu, R., Birke, S., Carberry, S. E., Geacintov, N. E., Swenberg, C. E., and Harvey, R. G. (1992) Differences in unwinding of supercoiled DNA induced by the two enantiomers of anti-benzo[α]pyrene diol epoxide. Nucleic Acids Res. 20, 6167-6176.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 6167-6176
    • Xu, R.1    Birke, S.2    Carberry, S.E.3    Geacintov, N.E.4    Swenberg, C.E.5    Harvey, R.G.6
  • 20
    • 0030031220 scopus 로고    scopus 로고
    • Base sequence-dependent bends in site-specific benzo[α]pyrene diol epoxide-modified oligonucleotide duplexes
    • Liu, T., Xu, J., Tsao, H., Li, B., Xu, R., Yang, C., Amin, S., Moriya, M., and Geacintov, N. E. (1996) Base sequence-dependent bends in site-specific benzo[α]pyrene diol epoxide-modified oligonucleotide duplexes. Chem. Res. Toxicol. 9, 255-261.
    • (1996) Chem. Res. Toxicol. , vol.9 , pp. 255-261
    • Liu, T.1    Xu, J.2    Tsao, H.3    Li, B.4    Xu, R.5    Yang, C.6    Amin, S.7    Moriya, M.8    Geacintov, N.E.9
  • 21
    • 0029070122 scopus 로고
    • Stereochemistry-dependent bending in oligonucleotide duplexes induced by site-specific covalent benzo[α]pyrene diol epoxide-guanine lesions
    • Xu, R., Mao, B., Xu, J., Li, B., Birke, S., Swenberg, C. E., and Geacintov, N. E. (1995) Stereochemistry-dependent bending in oligonucleotide duplexes induced by site-specific covalent benzo[α]pyrene diol epoxide-guanine lesions. Nucleic Acids Res. 23, 2314-2319.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 2314-2319
    • Xu, R.1    Mao, B.2    Xu, J.3    Li, B.4    Birke, S.5    Swenberg, C.E.6    Geacintov, N.E.7
  • 22
    • 0032512426 scopus 로고    scopus 로고
    • Bending and cirucularization of site-specific and stereoisomeric carcinogen-DNA adducts
    • Xu, R., Mao, B., Amin, S., and Geacintov, N. (1998) Bending and cirucularization of site-specific and stereoisomeric carcinogen-DNA adducts. Biochemistry 37, 769-778.
    • (1998) Biochemistry , vol.37 , pp. 769-778
    • Xu, R.1    Mao, B.2    Amin, S.3    Geacintov, N.4
  • 24
    • 0032492642 scopus 로고    scopus 로고
    • Sequence dependence and characteristics of bends induced by site-specific polynuclear aromatic carcinogen-deoxyguanosine lesions in oligonucleotides
    • Tsao, H., Mao, B., Zhuang, P., Xu, R., Amin, S., and Geacintov, N. E. (1998) Sequence dependence and characteristics of bends induced by site-specific polynuclear aromatic carcinogen-deoxyguanosine lesions in oligonucleotides. Biochemistry 37, 4993-5000.
    • (1998) Biochemistry , vol.37 , pp. 4993-5000
    • Tsao, H.1    Mao, B.2    Zhuang, P.3    Xu, R.4    Amin, S.5    Geacintov, N.E.6
  • 25
    • 0031765767 scopus 로고    scopus 로고
    • What is the true rate of K-ras mutation in carcinoma of the pancreas?
    • Longnecker, D. S., and Terhune, P. G. (1998) What is the true rate of K-ras mutation in carcinoma of the pancreas? Pancreas 17, 323-324.
    • (1998) Pancreas , vol.17 , pp. 323-324
    • Longnecker, D.S.1    Terhune, P.G.2
  • 28
    • 0033537694 scopus 로고    scopus 로고
    • 6-(1-benz[α]anthracenyl)-2′-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence
    • 6-(1-benz[α]anthracenyl)-2′-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence. Biochemistry 38, 2969-2981.
    • (1999) Biochemistry , vol.38 , pp. 2969-2981
    • Li, Z.1    Mao, H.2    Kim, H.Y.3    Tamura, P.J.4    Harris, C.M.5    Harris, T.M.6    Stone, M.P.7
  • 29
    • 0033534166 scopus 로고    scopus 로고
    • 6-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxy-benz[α]anthracenyl)]- 2′-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence. (1999)
    • 6-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxy-benz[α]anthracenyl)]- 2′-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence. (1999) Biochemistry 38, 16045-16057.
    • (1999) Biochemistry , vol.38 , pp. 16045-16057
    • Li, Z.1    Kim, H.-Y.2    Tamura, P.J.3    Harris, C.M.4    Harris, T.M.5    Stone, M.P.6
  • 30
    • 0033539494 scopus 로고    scopus 로고
    • 6-[11-(8,9,10,11-tetrahydro-8,9,10-trihydroxy-benz[α] anthracenyl)]-2′-deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene.
    • 6-[11-(8,9,10,11-tetrahydro-8,9,10-trihydroxy-benz[α] anthracenyl)]-2′-deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene. (1999) Biochemistry 38, 14820-14832.
    • (1999) Biochemistry , vol.38 , pp. 14820-14832
    • Li, Z.1    Kim, H.-Y.2    Tamura, P.J.3    Harris, C.M.4    Harris, T.M.5    Stone, M.P.6
  • 33
    • 0004337732 scopus 로고    scopus 로고
    • 6-adenyl)-styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence
    • 6-adenyl)-styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence. Magn. Reson. Chem. 34, S105-S114.
    • (1996) Magn. Reson. Chem. , vol.34
    • Stone, M.P.1    Feng, B.2
  • 35
    • 0029014360 scopus 로고
    • In vitro replication by prokaryotic and eukaryotic polymerases on DNA templates containing site-specific and stereospecific benzo[α]pyrene-7,8-dihydrodiol-9,10-epoxide adducts
    • Chary, P., and Lloyd, R. S. (1995) In vitro replication by prokaryotic and eukaryotic polymerases on DNA templates containing site-specific and stereospecific benzo[α]pyrene-7,8-dihydrodiol-9,10-epoxide adducts. Nucleic Acids Res. 23, 1398-1405.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1398-1405
    • Chary, P.1    Lloyd, R.S.2
  • 36
    • 0028939633 scopus 로고
    • The efficiency of translesion synthesis past single styrene oxide DNA adducts in vitro is polymerase-specific
    • Latham, G. J., Harris, C. M., Harris, T. M., and Lloyd, R. S. (1995) The efficiency of translesion synthesis past single styrene oxide DNA adducts in vitro is polymerase-specific. Chem. Res. Toxicol. 8, 422-430.
    • (1995) Chem. Res. Toxicol. , vol.8 , pp. 422-430
    • Latham, G.J.1    Harris, C.M.2    Harris, T.M.3    Lloyd, R.S.4
  • 37
    • 0029908520 scopus 로고    scopus 로고
    • Comparison of the efficiency of synthesis past single bulky DNA adducts in vivo and in vitro by the polymerase III holenzyme
    • Latham, G. J., McNees, A. G., DeCorte, B., Harris, C. M., Harris, T. M., O'Donnell, M., and Lloyd, R. S. (1996) Comparison of the efficiency of synthesis past single bulky DNA adducts in vivo and in vitro by the polymerase III holenzyme. Chem. Res. Toxicol. 9, 1167-1175.
    • (1996) Chem. Res. Toxicol. , vol.9 , pp. 1167-1175
    • Latham, G.J.1    McNees, A.G.2    DeCorte, B.3    Harris, C.M.4    Harris, T.M.5    O'Donnell, M.6    Lloyd, R.S.7
  • 39
    • 0031466608 scopus 로고    scopus 로고
    • Lack of correlation between in vitro and in vivo replication of precisely defined benz[α]anthracene adducted DNAs
    • McNees, A. G., O'Donnell, M., Horton, P. H., Kim, H. Y., Kim, S. J., Harris, C. M., Harris, T. M., and Lloyd, R. S. (1997) Lack of correlation between in vitro and in vivo replication of precisely defined benz[α]anthracene adducted DNAs. J. Biol. Chem. 272, 33211-33219.
    • (1997) J. Biol. Chem. , vol.272 , pp. 33211-33219
    • McNees, A.G.1    O'Donnell, M.2    Horton, P.H.3    Kim, H.Y.4    Kim, S.J.5    Harris, C.M.6    Harris, T.M.7    Lloyd, R.S.8
  • 40
    • 0024121469 scopus 로고
    • Calibration of DNA curvature and a unified description of sequence-directed bending
    • Koo, H. S., and Crothers, D. M. (1988) Calibration of DNA curvature and a unified description of sequence-directed bending. Proc. Natl. Acad. Sci. U.S.A. 85, 1763-1767.
    • (1988) Proc. Natl. Acad. Sci. U.S.A. , vol.85 , pp. 1763-1767
    • Koo, H.S.1    Crothers, D.M.2
  • 43
    • 0028034506 scopus 로고
    • Deoxynucleotide polymerization by HIV-1 reverse transcriptase is terminated by site-specific styrene oxide after translesion synthesis
    • Latham, G. J., and Lloyd, R. S. (1994) Deoxynucleotide polymerization by HIV-1 reverse transcriptase is terminated by site-specific styrene oxide after translesion synthesis. J. Biol. Chem. 269, 28527-28530.
    • (1994) J. Biol. Chem. , vol.269 , pp. 28527-28530
    • Latham, G.J.1    Lloyd, R.S.2
  • 46
    • 84949380522 scopus 로고
    • A new strategy for the synthesis of oligodeoxynucleotides bearing adducts at exocyclic amino sites of purine nucleosides
    • Harris, C. M., Zhou, L., Strand, E. A., and Harris, T. M. (1991) A new strategy for the synthesis of oligodeoxynucleotides bearing adducts at exocyclic amino sites of purine nucleosides. J. Am. Chem. Soc. 113, 4328-4329.
    • (1991) J. Am. Chem. Soc. , vol.113 , pp. 4328-4329
    • Harris, C.M.1    Zhou, L.2    Strand, E.A.3    Harris, T.M.4
  • 47
    • 0028892069 scopus 로고
    • How to generate accurate solution structures of double-helical nucleic acid fragments using nuclear magnetic resonance and restrained molecular dynamics
    • Schmitz, U., and James, T. L. (1995) How to generate accurate solution structures of double-helical nucleic acid fragments using nuclear magnetic resonance and restrained molecular dynamics. Methods Enzymol. 261, 3-44.
    • (1995) Methods Enzymol. , vol.261 , pp. 3-44
    • Schmitz, U.1    James, T.L.2
  • 49
    • 0028988423 scopus 로고
    • Solution conformation of the (-)-trans-anti-benzo[c]phenanthrene-dA ([BPh]-dA) adduct opposite dT in a DNA duplex: Intercalation of the covalently attached benzo[c]phenanthrenyl ring to the 3′-side of the adduct site and comparison with the (-)-trans-anti-[BPh]dA opposite dT stereoisomer
    • Cosman, M., Laryea, A., Fiala, R., Hingerty, B. E., Amin, S., Geacintov, N. E., Broyde, S., and Patel, D. J. (1995) Solution conformation of the (-)-trans-anti-benzo[c]phenanthrene-dA ([BPh]-dA) adduct opposite dT in a DNA duplex: Intercalation of the covalently attached benzo[c]phenanthrenyl ring to the 3′-side of the adduct site and comparison with the (-)-trans-anti-[BPh]dA opposite dT stereoisomer. Biochemistry 34, 1295-1307.
    • (1995) Biochemistry , vol.34 , pp. 1295-1307
    • Cosman, M.1    Laryea, A.2    Fiala, R.3    Hingerty, B.E.4    Amin, S.5    Geacintov, N.E.6    Broyde, S.7    Patel, D.J.8
  • 52
    • 0030886735 scopus 로고    scopus 로고
    • Solution structure of the minor conformer of a DNA duplex containing a dG mismatch opposite a benzo[α]pyrene diol epoxide/ dA adduct: Glycosidic rotation from syn to anti at the modified deoxyadenosine
    • Schwartz, J. L., Rice, J. S., Luxon, B. A., Sayer, J. M., Xie, G., Yeh, H. J., Liu, X., Jerina, D. M., and Gorenstein, D. G. (1997) Solution structure of the minor conformer of a DNA duplex containing a dG mismatch opposite a benzo[α]pyrene diol epoxide/ dA adduct: Glycosidic rotation from syn to anti at the modified deoxyadenosine. Biochemistry 36, 11069-11076.
    • (1997) Biochemistry , vol.36 , pp. 11069-11076
    • Schwartz, J.L.1    Rice, J.S.2    Luxon, B.A.3    Sayer, J.M.4    Xie, G.5    Yeh, H.J.6    Liu, X.7    Jerina, D.M.8    Gorenstein, D.G.9


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