Sulfide:quinone oxidoreductase in membranes of the hyperthermophilic bacterium Aquifex aeolicus (VF5)

Archives of Microbiology

Volumn 173, Issue 4, 2000, Pages 233-244

  Nübel, Tobias ^a   Klughammer, Christof ^b   Huber, Robert ^a   Hauska, Günter ^a   Schütz, Michael ^a  

^a UNIVERSITY OF REGENSBURG   (Germany)

^b UNIVERSITY OF WÜRZBURG   (Germany)

Author keywords

Aquifex aeolicus; Cytochrome bc complex; Hyperthermophiles; Sulfide oxidation; Sulfide:quinone oxidoreductase

Indexed keywords

CYANIDE; HYDROGEN SULFIDE; MEMBRANE ENZYME; QUINOLINOL DERIVATIVE; SULFIDE:QUINONE OXIDOREDUCTASE; UBIQUINOL CYTOCHROME C REDUCTASE; UBIQUINONE DERIVATIVE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; AQUIFEX AEOLICUS; ARTICLE; BACTERIAL MEMBRANE; ELECTRON TRANSPORT; ENZYME ACTIVITY; NONHUMAN; OXIDATION; OXYGEN CONSUMPTION; PRIORITY JOURNAL; REDUCTION; RHODOBACTER; SPECTROPHOTOMETRY; TEMPERATURE; THERMOPHILIC BACTERIUM;

ALLOCHROMATIUM VINOSUM; AQUIFEX AEOLICUS; BACTERIA (MICROORGANISMS); NEGIBACTERIA; RHODOBACTER; RHODOBACTER CAPSULATUS;

EID: 0034039158     PISSN: 03028933     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002030000135     Document Type: Article

References (48)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
2. Arieli B, Padan E, Shahak Y (1991) Sulfide induced sulfide-quinone reductase activity in thylakoids of Oscillatoria limnetica. J Biol Chem 266:104-111
3. Arieli B, Shahak Y, Taglicht D, Hauska G, Padan E (1994) Purification and characterization of sulfide-quinone reductase (SQR), a novel enzyme driving anoxygenic photosynthesis in Oscillatoria limnetica. J Biol Chem 269:5705-5711
4. Beffa T, Berczy M, Aragno M (1992) Inhibition of respiratory oxidation of elemental sulfur (S°) and thiosulfate in Thiobacillus versutus and another sulfur-oxidizing bacterium. FEMS Microbiol Lett 90:123-128
5. 3 complexes. J Biol Chem 260:2458-2467
6. Brandt U, Trumpower B (1994) The protonmotive Q cycle in mitochondria and bacteria. Crit Rev Biochem Mol Biol 29: 165-197
7. Brune DC (1995) Sulfur compounds as photosynthetic electron donors. In: Blankenship RE, Madigan MT, Bauer CE (eds) Anoxygenic photosynthetic bacteria. Kluwer Academic, Dordrecht, pp 847-870
8. Brune DC, Trüper HG (1986) Noncyclic electron transport in chromatophores from photolithotrophically grown Rhodobacter sulfidophilus. Arch Microbiol 145:294-301
9. Burggraf S, Olsen GJ, Stetter KO, Woese CR (1992) A phylogenetic analysis of Aquifex pyrophilus. Syst Appl Microbiol 15: 352-356
10. Chen Z-W, Koh M, van Driessche G, van Beeumen JJ, Bartsch RG, Meyer TE, Cusanovich MA, Mathews FS (1994) The structure of flavocytochrome c sulfide dehydrogenase from a purple phototrophic bacterium. Science 266:430-32
11. Deckert G, Warren PV, Gaasterland T, Young WG, Lenox AL, Graham DE, Overbeek R, Snead MA, Keller M, Aujay M, Huber R, Feldman RA, Short JM, Olson GJ, Swanson RV (1998) The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392: 353-358
12. Eggink G, Engel H, Vriend G, Terpstra P, Witholt P (1990) Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints. J Mol Biol 212:135-142
13. Friedrich CG (1998) Physiology and genetics of bacterial sulfur oxidation. Adv Microb Physiol 39:236-289
14. Hallberg KB, Dopson M, Lindström EB (1996) Reduced sulfur compound oxidation by Thiobacillus caldus. J Bacteriol 178: 6-11
15. 6f complex - composition, structure and function. In: Ort DR, Yocum CF (eds) Advances in photosynthesis, vol 4. Kluwer Academic, Dordrecht, pp 377-398
16. Hazeu W, Batenburg-van der Vegte WH, Bos P, van der Pas RK, Kuenen JG (1988) The production and utilization of intermediary elemental sulfur during the oxidation of reduced sulfur compounds byThiobacillus ferrooxidans. Arch Microbiol 150: 574-579
17. Higgins DG, Sharp PM (1989) Fast and sensitive multiple sequence alignments on a microcomputer. Comp Appl Biomed Sci (CABIOS) 5:151-153
18. Huber R, Wilharm T, Huber D, Trincone A, Burggraf S, König H, Rachel R, Rockinger I, Fricke H, Stetter KO (1992) Aquifex pyrophilus gen. nov. sp. nov. represents a novel group of marine hyperthermophilic hydrogen-oxidizing bacteria. Syst Appl Microbiol 15:340-351
19. Imhoff JF, Süling J, Petri R (1998) Phylogenetic and taxonomic reclassification of Chromatium species and related purple sulfur bacteria. Int J Syst Bacteriol 48:1129-1143
20. Ishii M, Kawasumi T, Igarashi Y, Kodama T, Minoda Y (1987) 2-Methylthio-1,4-naphthoquinone, a unique sulfur-containing quinone from a thermophilic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus. J Bacteriol 169:2380-2384
21. Karplus PA, Schulz GE (1987) Refined structure of glutathione reductase at 1.54 Å resolution. J Mol Biol 195:701-792
22. Kelly DP, Shergill JK, Lu W-P, Wood AP (1997) Oxidative metabolism of inorganic sulfur compounds by bacteria. Antonie van Leeuwenhoek 71:95-107
23. Klughammer C, Kolbowski J, Schreiber U (1990) LED-array spectrophotometer for time resolved difference spectra in the 530-600 nm wave length region. Photosynth Res 25: 317-327
24. Klughammer C, Hager C, Padan E, Schütz M, Schreiber U, Shahak Y, Hauska G (1995) Reduction of cytochromes with menaquinol and sulfide in membranes from green sulfur bacteria. Photosynth Res 43:27-34
25. Massey V, Ghisla S (1983) The mechanism of action of flavoprotein-catalyzed reactions. In: Sund H, Ulrich V (eds) Biological oxidations. Springer, Berlin Heidelberg New York, pp 114-139
26. Meyer TE, Bartsch RG, Cusanovich MA (1991) Adduct formation between sulfite and the flavin of phototrophic bacterial flavocytochromes c. Kinetics of sequential bleach, recolor, and rebleach of flavin as function of pH. Biochemistry 30:8840-8845
27. Moriarty DJW, Nicholas DJD (1970) Electron transfer during sulphide and sulphite oxidation by Thiobacillus concretivorus. Biochim Biophys Acta 216:130-138
28. Morton RA (1965) Spectroscopy of quinones and related substances. In: Morton RA (ed) Biochemistry of quinones. Academic, London, pp 23-64
29. National Research Council (1979) Hydrogen sulfide. University Park Press, Baltimore
30. 3. Isosteric and allosteric shifts of the reduced αa-peak. Biochim Biophys Acta 396:24-35
31. 6f-complex. Z Naturforsch 45C: 311-328
32. Pronk JT, Meulenberg R, Hazeu W, Bos P, Kuenen JG (1990) Oxidation of reduced inorganic sulphur compounds by acidophilic thiobacilli. FEMS Microbiol Rev 75:293-306
33. Reinartz M, Tschäpe T, Brüser T, Trüper HG, Dahl C (1998) Sulfide oxidation in the phototrophic bacterium Chromatium vinosum. Arch Microbiol 170:59-68
34. 1 complex. Biochim Biophys Acta 722:271-280
35. Saxena J, Aleem IH (1973) Oxidation of sulfur compounds and coupled phosphorylation in the chemoautotroph Thiobacillus neapolitanus. Can J Biochem 51:560-568
36. Schütz M, Shahak Y, Padan E, Hauska G (1997) Sulfide-quinone reductase from Rhodobacter capsulatus. J Biol Chem 272: 9890-9894
37. Schütz M, Klughammer C, Griesbeck C, Quentmeier A, Friedrich CG, Hauska G (1998) Sulfide-quinone reductase in membranes of the chemotrophic bacterium Paracoccus denitrificans GB17. Arch Microbiol 170:353-360
38. Schütz M, Maldener I, Griesbeck C, Hauska G (1999) Sulfide-quinone reductase from Rhodobacter capsulatus. Requirement for growth, periplasmic localization and extension of gene sequence analysis. J Bacteriol 181:6516-6523
39. Shahak Y, Arieli B, Padan E, Hauska G (1992) Sulfide-quinone reductase (SQR) in Chlorobium. FEBS Lett 299:127-130
40. Shahak Y, Klughammer C, Schreiber U, Padan E, Herrmann I, Hauska G (1994) Sulfide-quinone and sulfide-cytochrome reduction in Rhodobacter capsulatus. Photosynth Res 39:175-181
41. Shahak Y, Schütz M, Bronstein M, Griesbeck C, Hauska G, Padan E (1998) Sulfide-dependent anoxygenic photosynthesis in prokaryotes: sulfide-quinone reductase (SQR), the initial step. In: Peschek GA, Löffelhardt W, Schmetterer G (eds) The phototrophic prokaryotes. Plenum, New York, pp 217-228
42. Trüper HG, Schlegel HG (1964) Sulphur metabolism in Thiorhodaceae. I. Quantitative measurements on growing cells of Chromatium okenii. Antonie van Leeuwenhoek 30:225-238
43. Vande Weghe J, Ow DW (1999) A fission yeast gene for mitochondrial sulfide oxidation. J Biol Chem 274:13250-13257
44. Van Driessche G, Koh M, Chen Z-W, Mathews SF, Meyer TE, Bartsch RG, Cusanovich MA, van Beeumen JJ (1996) Covalent structure of the flavoprotein subunit of the flavocytochrome c:sulfide dehydrogenase from the purple phototrophic bacterium Chromatium vinosum. Protein Sci 5:1753-1764
45. Visser JM, de Jong GAH, Robertson LA, Kuenen JG (1997) A novel membrane-bound flavocytochrome c sulfide dehydrogenase from the colourless sulfur bacterium Thiobacillus sp. W5. Arch Microbiol 167:295-301
46. Wierenga RK, Terpstra P, Hol WGJ (1986) Prediction of the occurrence of the ADP binding βαβ fold in proteins, using an amino acid sequence fingerprint. J Mol Biol 187:101-107
47. 553 derived from Chlorobium thiosulfatophilum. In: Singer TP (ed) Flavins and flavoproteins. Elsevier, Amsterdam, pp 292-301
48. 1 complex. Biochim Biophys Acta 1365:151-158